RNA–Protein interactions for RNA: ENST00000532197.1

NECTIN1-207, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 452 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-207ENST00000532197 COA1Q9GZY4 146 aa11.4□□□□□ -0.58
NECTIN1-207ENST00000532197 CNNM1Q9NRU3 951 aa11.4□□□□□ -0.58
NECTIN1-207ENST00000532197 ADARB2Q9NS39 739 aaKnown RBP11.4□□□□□ -0.58
NECTIN1-207ENST00000532197 PSMD14O00487 310 aa11.39□□□□□ -0.59
NECTIN1-207ENST00000532197 EPS15P42566 896 aa11.39□□□□□ -0.59
NECTIN1-207ENST00000532197 KCNJ4P48050 445 aa11.39□□□□□ -0.59
NECTIN1-207ENST00000532197 VEGFBP49765 207 aa11.39□□□□□ -0.59
NECTIN1-207ENST00000532197 MMP14P50281 582 aa11.39□□□□□ -0.59
NECTIN1-207ENST00000532197 ZKSCAN2Q63HK3 967 aa11.39□□□□□ -0.59
NECTIN1-207ENST00000532197 AGBL3Q8NEM8 1001 aa11.39□□□□□ -0.59
NECTIN1-207ENST00000532197 ZC3H15Q8WU90 426 aaKnown RBP11.39□□□□□ -0.59
NECTIN1-207ENST00000532197 GPR101Q96P66 508 aaPredicted RBP11.39□□□□□ -0.59
NECTIN1-207ENST00000532197 WBP1LQ9NX94 342 aa11.39□□□□□ -0.59
NECTIN1-207ENST00000532197 PGAP2Q9UHJ9 254 aa11.39□□□□□ -0.59
NECTIN1-207ENST00000532197 FBXO3Q9UK99 471 aa11.39□□□□□ -0.59
NECTIN1-207ENST00000532197 MROH5Q6ZUA9 1318 aa11.38□□□□□ -0.59
NECTIN1-207ENST00000532197 USP17L3A6NCW0 530 aa11.38□□□□□ -0.59
NECTIN1-207ENST00000532197 USP17L4A6NCW7 530 aa11.38□□□□□ -0.59
NECTIN1-207ENST00000532197 H7C1D1 291 aa11.38□□□□□ -0.59
NECTIN1-207ENST00000532197 CTCFP49711 727 aaPredicted RBP11.38□□□□□ -0.59
NECTIN1-207ENST00000532197 MAP2K1Q02750 393 aaPredicted RBP11.38□□□□□ -0.59
NECTIN1-207ENST00000532197 UBE4AQ14139 1066 aa11.38□□□□□ -0.59
NECTIN1-207ENST00000532197 USP17L1Q7RTZ2 530 aa11.38□□□□□ -0.59
NECTIN1-207ENST00000532197 FRAT1Q92837 279 aaPredicted RBP11.38□□□□□ -0.59
NECTIN1-207ENST00000532197 AIDAQ96BJ3 306 aa11.38□□□□□ -0.59
NECTIN1-207ENST00000532197 ZNF594Q96JF6 807 aaPredicted RBP11.38□□□□□ -0.59
NECTIN1-207ENST00000532197 CNOT7Q9UIV1 285 aaKnown RBP11.38□□□□□ -0.59
NECTIN1-207ENST00000532197 RIPOR2Q9Y4F9 1068 aa11.38□□□□□ -0.59
NECTIN1-207ENST00000532197 MYH13Q9UKX3 1938 aa11.38□□□□□ -0.59
NECTIN1-207ENST00000532197 MYO3BQ8WXR4 1341 aa11.37□□□□□ -0.59
NECTIN1-207ENST00000532197 IRS2Q9Y4H2 1338 aa11.37□□□□□ -0.59
NECTIN1-207ENST00000532197 WTIPA6NIX2 430 aaPredicted RBP11.37□□□□□ -0.59
NECTIN1-207ENST00000532197 ECE1P42892 770 aa11.37□□□□□ -0.59
NECTIN1-207ENST00000532197 STRIP1Q5VSL9 837 aa11.37□□□□□ -0.59
NECTIN1-207ENST00000532197 HHIPL1Q96JK4 782 aa11.37□□□□□ -0.59
NECTIN1-207ENST00000532197 KCNQ5Q9NR82 932 aa11.37□□□□□ -0.59
NECTIN1-207ENST00000532197 PCNTO95613 3336 aa11.37□□□□□ -0.59
NECTIN1-207ENST00000532197 ARAP2Q8WZ64 1704 aa11.37□□□□□ -0.59
NECTIN1-207ENST00000532197 ECM29Q5VYK3 1845 aa11.37□□□□□ -0.59
NECTIN1-207ENST00000532197 WDR33Q9C0J8 1336 aaKnown RBP11.36□□□□□ -0.59
NECTIN1-207ENST00000532197 FOXN1O15353 648 aa11.36□□□□□ -0.59
NECTIN1-207ENST00000532197 TAF5LO75529 589 aa11.36□□□□□ -0.59
NECTIN1-207ENST00000532197 MTX1Q13505 466 aa11.36□□□□□ -0.59
NECTIN1-207ENST00000532197 RSBN1LQ6PCB5 846 aaPredicted RBP11.36□□□□□ -0.59
NECTIN1-207ENST00000532197 ZNF804AQ7Z570 1209 aa11.36□□□□□ -0.59
NECTIN1-207ENST00000532197 TXNRD3Q86VQ6 643 aa11.36□□□□□ -0.59
NECTIN1-207ENST00000532197 MICALL2Q8IY33 904 aa11.36□□□□□ -0.59
NECTIN1-207ENST00000532197 HELBQ8NG08 1087 aaPredicted RBP11.36□□□□□ -0.59
NECTIN1-207ENST00000532197 GMLQ99445 158 aa11.36□□□□□ -0.59
NECTIN1-207ENST00000532197 MEIS3Q99687 375 aa11.36□□□□□ -0.59
NECTIN1-207ENST00000532197 MS4A1P11836 297 aa11.35□□□□□ -0.59
NECTIN1-207ENST00000532197 IL1R1P14778 569 aa11.35□□□□□ -0.59
NECTIN1-207ENST00000532197 RFX5P48382 616 aaPredicted RBP11.35□□□□□ -0.59
NECTIN1-207ENST00000532197 ZNF280AP59817 542 aaPredicted RBP11.35□□□□□ -0.59
NECTIN1-207ENST00000532197 DACT2Q5SW24 774 aa11.35□□□□□ -0.59
NECTIN1-207ENST00000532197 PUS3Q9BZE2 481 aaKnown RBP11.35□□□□□ -0.59
NECTIN1-207ENST00000532197 CD209Q9NNX6 404 aa11.35□□□□□ -0.59
NECTIN1-207ENST00000532197 ABT1Q9ULW3 272 aaKnown RBP11.35□□□□□ -0.59
NECTIN1-207ENST00000532197 ZBTB12Q9Y330 459 aaPredicted RBP11.35□□□□□ -0.59
NECTIN1-207ENST00000532197 LRRFIP2Q9Y608 721 aaKnown RBP11.35□□□□□ -0.59
NECTIN1-207ENST00000532197 TLL2Q9Y6L7 1015 aa11.35□□□□□ -0.59
NECTIN1-207ENST00000532197 EYA2O00167 538 aa11.34□□□□□ -0.59
NECTIN1-207ENST00000532197 CIAO1O76071 339 aa11.34□□□□□ -0.59
NECTIN1-207ENST00000532197 PDE8BO95263 885 aa11.34□□□□□ -0.59
NECTIN1-207ENST00000532197 MAP2K2P36507 400 aa11.34□□□□□ -0.59
NECTIN1-207ENST00000532197 PTPN12Q05209 780 aaKnown RBP11.34□□□□□ -0.59
NECTIN1-207ENST00000532197 METTL24Q5JXM2 366 aa11.34□□□□□ -0.59
NECTIN1-207ENST00000532197 CST9Q5W186 159 aa11.34□□□□□ -0.59
NECTIN1-207ENST00000532197 FTSJ3Q8IY81 847 aaKnown RBP11.34□□□□□ -0.59
NECTIN1-207ENST00000532197 DZIP1LQ8IYY4 767 aaKnown RBP11.34□□□□□ -0.59
NECTIN1-207ENST00000532197 VGLL2Q8N8G2 317 aa11.34□□□□□ -0.59
NECTIN1-207ENST00000532197 THSD7BQ9C0I4 1608 aa11.34□□□□□ -0.59
NECTIN1-207ENST00000532197 PLIN1O60240 522 aa11.33□□□□□ -0.6
NECTIN1-207ENST00000532197 SASH1O94885 1247 aa11.33□□□□□ -0.6
NECTIN1-207ENST00000532197 GNAI2P04899 355 aa11.33□□□□□ -0.6
NECTIN1-207ENST00000532197 USP17L8P0C7I0 530 aa11.33□□□□□ -0.6
NECTIN1-207ENST00000532197 KLRK1P26718 216 aa11.33□□□□□ -0.6
NECTIN1-207ENST00000532197 HIRAP54198 1017 aaPredicted RBP11.33□□□□□ -0.6
NECTIN1-207ENST00000532197 FKBP1AP62942 108 aaKnown RBP11.33□□□□□ -0.6
NECTIN1-207ENST00000532197 LRRC24Q50LG9 513 aa11.33□□□□□ -0.6
NECTIN1-207ENST00000532197 TTLL5Q6EMB2 1281 aa11.33□□□□□ -0.6
NECTIN1-207ENST00000532197 CDC37L1Q7L3B6 337 aa11.33□□□□□ -0.6
NECTIN1-207ENST00000532197 OGFOD1Q8N543 542 aa11.33□□□□□ -0.6
NECTIN1-207ENST00000532197 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.6
NECTIN1-207ENST00000532197 COPRSQ9NQ92 184 aa11.33□□□□□ -0.6
NECTIN1-207ENST00000532197 SNAP23O00161 211 aa11.32□□□□□ -0.6
NECTIN1-207ENST00000532197 HIBADHP31937 336 aaKnown RBP11.32□□□□□ -0.6
NECTIN1-207ENST00000532197 IL15P40933 162 aaPredicted RBP11.32□□□□□ -0.6
NECTIN1-207ENST00000532197 PUM3Q15397 648 aaKnown RBP11.32□□□□□ -0.6
NECTIN1-207ENST00000532197 ATG9AQ7Z3C6 839 aa11.32□□□□□ -0.6
NECTIN1-207ENST00000532197 SAPCD2Q86UD0 394 aa11.32□□□□□ -0.6
NECTIN1-207ENST00000532197 TMEM57Q8N5G2 664 aa11.32□□□□□ -0.6
NECTIN1-207ENST00000532197 TDRD7Q8NHU6 1098 aaKnown RBP11.32□□□□□ -0.6
NECTIN1-207ENST00000532197 TRPM4Q8TD43 1214 aa11.32□□□□□ -0.6
NECTIN1-207ENST00000532197 CAPNS2Q96L46 248 aa11.32□□□□□ -0.6
NECTIN1-207ENST00000532197 FAM205AQ6ZU69 1335 aa11.32□□□□□ -0.6
NECTIN1-207ENST00000532197 SHTN1A0MZ66 631 aa11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 CA12O43570 354 aa11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 IFIT1P09914 478 aaKnown RBP11.31□□□□□ -0.6
NECTIN1-207ENST00000532197 HSPA8P11142 646 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms