RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ZNF646O15015 1829 aaPredicted RBP21.45■■□□□ 1.02
CPSF1-207ENST00000531727 BEGAINQ9BUH8 593 aa21.44■■□□□ 1.02
CPSF1-207ENST00000531727 GGA3Q9NZ52 723 aa21.44■■□□□ 1.02
CPSF1-207ENST00000531727 LEMD3Q9Y2U8 911 aa21.44■■□□□ 1.02
CPSF1-207ENST00000531727 F6X3S4 739 aa21.42■■□□□ 1.02
CPSF1-207ENST00000531727 ASTN2O75129 1339 aaPredicted RBP21.42■■□□□ 1.02
CPSF1-207ENST00000531727 USP17L8P0C7I0 530 aa21.42■■□□□ 1.02
CPSF1-207ENST00000531727 HUNKP57058 714 aa21.42■■□□□ 1.02
CPSF1-207ENST00000531727 BEND3Q5T5X7 828 aa21.42■■□□□ 1.02
CPSF1-207ENST00000531727 SULF1Q8IWU6 871 aa21.42■■□□□ 1.02
CPSF1-207ENST00000531727 MPHOSPH8Q99549 860 aa21.42■■□□□ 1.02
CPSF1-207ENST00000531727 ANKRD2Q9GZV1 360 aa21.42■■□□□ 1.02
CPSF1-207ENST00000531727 COA1Q9GZY4 146 aa21.41■■□□□ 1.02
CPSF1-207ENST00000531727 GBA2Q9HCG7 927 aaPredicted RBP21.41■■□□□ 1.02
CPSF1-207ENST00000531727 MYOZ2Q9NPC6 264 aa21.41■■□□□ 1.02
CPSF1-207ENST00000531727 ZNF804BA4D1E1 1349 aa21.4■■□□□ 1.02
CPSF1-207ENST00000531727 BRPF1P55201 1214 aaPredicted RBP21.4■■□□□ 1.02
CPSF1-207ENST00000531727 SCARF1Q14162 830 aa21.4■■□□□ 1.02
CPSF1-207ENST00000531727 ANGEL2Q5VTE6 544 aaKnown RBP21.4■■□□□ 1.02
CPSF1-207ENST00000531727 C2orf69Q8N8R5 385 aa21.4■■□□□ 1.02
CPSF1-207ENST00000531727 ANKRD18BA2A2Z9 1011 aa21.39■■□□□ 1.01
CPSF1-207ENST00000531727 FOXO4P98177 505 aa21.39■■□□□ 1.01
CPSF1-207ENST00000531727 DACT2Q5SW24 774 aa21.39■■□□□ 1.01
CPSF1-207ENST00000531727 STRIP1Q5VSL9 837 aa21.39■■□□□ 1.01
CPSF1-207ENST00000531727 TXNRD3Q86VQ6 643 aa21.39■■□□□ 1.01
CPSF1-207ENST00000531727 A0A1B0GUL6 1792 aa21.38■■□□□ 1.01
CPSF1-207ENST00000531727 MYO3BQ8WXR4 1341 aa21.38■■□□□ 1.01
CPSF1-207ENST00000531727 CA12O43570 354 aa21.38■■□□□ 1.01
CPSF1-207ENST00000531727 CHRNDQ07001 517 aa21.38■■□□□ 1.01
CPSF1-207ENST00000531727 NOGQ13253 232 aa21.38■■□□□ 1.01
CPSF1-207ENST00000531727 ZNF521Q96K83 1311 aa21.37■■□□□ 1.01
CPSF1-207ENST00000531727 PITPNM2Q9BZ72 1349 aa21.37■■□□□ 1.01
CPSF1-207ENST00000531727 KLRK1P26718 216 aa21.37■■□□□ 1.01
CPSF1-207ENST00000531727 IFIT5Q13325 482 aaKnown RBP21.37■■□□□ 1.01
CPSF1-207ENST00000531727 RGMBQ6NW40 437 aa21.37■■□□□ 1.01
CPSF1-207ENST00000531727 FBXW7Q969H0 707 aa21.37■■□□□ 1.01
CPSF1-207ENST00000531727 CDCA5Q96FF9 252 aa21.37■■□□□ 1.01
CPSF1-207ENST00000531727 MXD3Q9BW11 206 aa21.37■■□□□ 1.01
CPSF1-207ENST00000531727 GRM8O00222 908 aa21.36■■□□□ 1.01
CPSF1-207ENST00000531727 KCNJ4P48050 445 aa21.36■■□□□ 1.01
CPSF1-207ENST00000531727 CHMP3Q9Y3E7 222 aa21.36■■□□□ 1.01
CPSF1-207ENST00000531727 FAM155AB1AL88 458 aaPredicted RBP21.35■■□□□ 1.01
CPSF1-207ENST00000531727 OGFOD1Q8N543 542 aa21.35■■□□□ 1.01
CPSF1-207ENST00000531727 TSKSQ9UJT2 592 aa21.35■■□□□ 1.01
CPSF1-207ENST00000531727 MMP14P50281 582 aa21.34■■□□□ 1.01
CPSF1-207ENST00000531727 TTLL5Q6EMB2 1281 aa21.34■■□□□ 1.01
CPSF1-207ENST00000531727 LMBR1LQ6UX01 489 aa21.34■■□□□ 1.01
CPSF1-207ENST00000531727 CCDC102AQ96A19 550 aa21.34■■□□□ 1.01
CPSF1-207ENST00000531727 ZIC5Q96T25 663 aa21.34■■□□□ 1.01
CPSF1-207ENST00000531727 IRS2Q9Y4H2 1338 aa21.33■■□□□ 1.01
CPSF1-207ENST00000531727 ALDH1L1O75891 902 aa21.33■■□□□ 1.01
CPSF1-207ENST00000531727 ZNF157P51786 506 aaPredicted RBP21.33■■□□□ 1.01
CPSF1-207ENST00000531727 NBPF9Q3BBW0 867 aa21.33■■□□□ 1.01
CPSF1-207ENST00000531727 EPHA10Q5JZY3 1008 aa21.33■■□□□ 1.01
CPSF1-207ENST00000531727 C9orf78Q9NZ63 289 aaPredicted RBP21.33■■□□□ 1.01
CPSF1-207ENST00000531727 PAPPA2Q9BXP8 1791 aa21.33■■□□□ 1
CPSF1-207ENST00000531727 SNAP23O00161 211 aa21.32■■□□□ 1
CPSF1-207ENST00000531727 TAF5LO75529 589 aa21.32■■□□□ 1
CPSF1-207ENST00000531727 CCDC57Q2TAC2 916 aa21.32■■□□□ 1
CPSF1-207ENST00000531727 SLC4A10Q6U841 1118 aa21.32■■□□□ 1
CPSF1-207ENST00000531727 C15orf52Q6ZUT6 534 aaKnown RBP21.32■■□□□ 1
CPSF1-207ENST00000531727 HELBQ8NG08 1087 aaPredicted RBP21.32■■□□□ 1
CPSF1-207ENST00000531727 SRCIN1Q9C0H9 1055 aa21.32■■□□□ 1
CPSF1-207ENST00000531727 CD209Q9NNX6 404 aa21.32■■□□□ 1
CPSF1-207ENST00000531727 WNT10BO00744 389 aa21.31■■□□□ 1
CPSF1-207ENST00000531727 FKBP1BP68106 108 aa21.31■■□□□ 1
CPSF1-207ENST00000531727 GTF2IP78347 998 aa21.31■■□□□ 1
CPSF1-207ENST00000531727 TAF7LQ5H9L4 462 aa21.3■■□□□ 1
CPSF1-207ENST00000531727 SCAF8Q9UPN6 1271 aaKnown RBP21.3■■□□□ 1
CPSF1-207ENST00000531727 SLC10A3P09131 477 aa21.29■■□□□ 1
CPSF1-207ENST00000531727 KIF23Q02241 960 aaPredicted RBP21.29■■□□□ 1
CPSF1-207ENST00000531727 LDHAL6AQ6ZMR3 332 aa21.29■■□□□ 1
CPSF1-207ENST00000531727 KIAA0825Q8IV33 1275 aa21.29■■□□□ 1
CPSF1-207ENST00000531727 ABHD8Q96I13 439 aa21.29■■□□□ 1
CPSF1-207ENST00000531727 ZNF594Q96JF6 807 aaPredicted RBP21.29■■□□□ 1
CPSF1-207ENST00000531727 HDAC9Q9UKV0 1011 aa21.29■■□□□ 1
CPSF1-207ENST00000531727 SASH1O94885 1247 aa21.28■■□□□ 1
CPSF1-207ENST00000531727 ZNF804AQ7Z570 1209 aa21.28■■□□□ 1
CPSF1-207ENST00000531727 CNNM1Q9NRU3 951 aa21.28■■□□□ 1
CPSF1-207ENST00000531727 E9PSI1 815 aa21.27■■□□□ 1
CPSF1-207ENST00000531727 IL1R1P14778 569 aa21.27■■□□□ 1
CPSF1-207ENST00000531727 MRPL50Q8N5N7 158 aaKnown RBP21.27■■□□□ 1
CPSF1-207ENST00000531727 PLIN1O60240 522 aa21.26■□□□□ 0.99
CPSF1-207ENST00000531727 PRAMEF18Q5VWM3 479 aa21.26■□□□□ 0.99
CPSF1-207ENST00000531727 RASAL3Q86YV0 1011 aa21.26■□□□□ 0.99
CPSF1-207ENST00000531727 CERS5Q8N5B7 392 aa21.26■□□□□ 0.99
CPSF1-207ENST00000531727 KAZALD1Q96I82 304 aa21.26■□□□□ 0.99
CPSF1-207ENST00000531727 SUCLG2Q96I99 432 aa21.26■□□□□ 0.99
CPSF1-207ENST00000531727 ZBED3Q96IU2 234 aaPredicted RBP21.26■□□□□ 0.99
CPSF1-207ENST00000531727 SAGE1Q9NXZ1 904 aa21.26■□□□□ 0.99
CPSF1-207ENST00000531727 UTYO14607 1347 aa21.26■□□□□ 0.99
CPSF1-207ENST00000531727 NBPF7P0C2Y1 421 aaPredicted RBP21.25■□□□□ 0.99
CPSF1-207ENST00000531727 APOBEC3FQ8IUX4 373 aaKnown RBP21.25■□□□□ 0.99
CPSF1-207ENST00000531727 AKAP11Q9UKA4 1901 aa21.25■□□□□ 0.99
CPSF1-207ENST00000531727 PTPRCP08575 1304 aa21.25■□□□□ 0.99
CPSF1-207ENST00000531727 CASP8AP2Q9UKL3 1982 aa21.25■□□□□ 0.99
CPSF1-207ENST00000531727 NF2P35240 595 aa21.24■□□□□ 0.99
CPSF1-207ENST00000531727 FKBP1AP62942 108 aaKnown RBP21.24■□□□□ 0.99
CPSF1-207ENST00000531727 MOB2Q70IA6 237 aa21.24■□□□□ 0.99
CPSF1-207ENST00000531727 ECM29Q5VYK3 1845 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms