RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	UBE4A	Q14139	1066 aa		32.18	■■■□□ 2.74
PICALM-215	ENST00000531558	GPRC5D	Q9NZD1	345 aa		32.18	■■■□□ 2.74
PICALM-215	ENST00000531558	VGLL2	Q8N8G2	317 aa		32.17	■■■□□ 2.74
PICALM-215	ENST00000531558	FBXO3	Q9UK99	471 aa		32.17	■■■□□ 2.74
PICALM-215	ENST00000531558	EPS15	P42566	896 aa		32.16	■■■□□ 2.74
PICALM-215	ENST00000531558	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	32.16	■■■□□ 2.74
PICALM-215	ENST00000531558	SIL1	Q9H173	461 aa		32.16	■■■□□ 2.74
PICALM-215	ENST00000531558	COPRS	Q9NQ92	184 aa		32.16	■■■□□ 2.74
PICALM-215	ENST00000531558	CIAO1	O76071	339 aa		32.15	■■■□□ 2.74
PICALM-215	ENST00000531558	VIL1	P09327	827 aa	Known RBP	32.15	■■■□□ 2.74
PICALM-215	ENST00000531558	ATG9A	Q7Z3C6	839 aa		32.15	■■■□□ 2.74
PICALM-215	ENST00000531558	SMC1B	Q8NDV3	1235 aa		32.15	■■■□□ 2.74
PICALM-215	ENST00000531558	PA2G4	Q9UQ80	394 aa	Known RBP	32.15	■■■□□ 2.74
PICALM-215	ENST00000531558	ZBTB12	Q9Y330	459 aa	Predicted RBP	32.15	■■■□□ 2.74
PICALM-215	ENST00000531558	PDE8B	O95263	885 aa		32.14	■■■□□ 2.74
PICALM-215	ENST00000531558	POTEI	P0CG38	1075 aa		32.14	■■■□□ 2.74
PICALM-215	ENST00000531558	POTEJ	P0CG39	1038 aa		32.14	■■■□□ 2.74
PICALM-215	ENST00000531558	RPS12	P25398	132 aa	Known RBP	32.14	■■■□□ 2.74
PICALM-215	ENST00000531558	FSTL1	Q12841	308 aa		32.14	■■■□□ 2.74
PICALM-215	ENST00000531558	MVP	Q14764	893 aa	Known RBP	32.14	■■■□□ 2.74
PICALM-215	ENST00000531558	USP17L3	A6NCW0	530 aa		32.13	■■■□□ 2.73
PICALM-215	ENST00000531558	USP17L4	A6NCW7	530 aa		32.13	■■■□□ 2.73
PICALM-215	ENST00000531558	EAPP	Q56P03	285 aa	Predicted RBP	32.13	■■■□□ 2.73
PICALM-215	ENST00000531558	USP17L1	Q7RTZ2	530 aa		32.13	■■■□□ 2.73
PICALM-215	ENST00000531558	ZNF804A	Q7Z570	1209 aa		32.13	■■■□□ 2.73
PICALM-215	ENST00000531558	PNMA8A	Q86V59	439 aa	Predicted RBP	32.13	■■■□□ 2.73
PICALM-215	ENST00000531558	DPF2	Q92785	391 aa		32.13	■■■□□ 2.73
PICALM-215	ENST00000531558	C1orf115	Q9H7X2	142 aa		32.13	■■■□□ 2.73
PICALM-215	ENST00000531558	ZNF609	O15014	1411 aa		32.12	■■■□□ 2.73
PICALM-215	ENST00000531558	LDHD	Q86WU2	507 aa		32.12	■■■□□ 2.73
PICALM-215	ENST00000531558	CD209	Q9NNX6	404 aa		32.12	■■■□□ 2.73
PICALM-215	ENST00000531558	PNMA6E	A0A0J9YXQ4	647 aa		32.11	■■■□□ 2.73
PICALM-215	ENST00000531558	PDE3A	Q14432	1141 aa		32.11	■■■□□ 2.73
PICALM-215	ENST00000531558	RSBN1L	Q6PCB5	846 aa	Predicted RBP	32.11	■■■□□ 2.73
PICALM-215	ENST00000531558	ADARB2	Q9NS39	739 aa	Known RBP	32.11	■■■□□ 2.73
PICALM-215	ENST00000531558	COG6	Q9Y2V7	657 aa		32.11	■■■□□ 2.73
PICALM-215	ENST00000531558	PSME4	Q14997	1843 aa		32.11	■■■□□ 2.73
PICALM-215	ENST00000531558	IL15	P40933	162 aa	Predicted RBP	32.1	■■■□□ 2.73
PICALM-215	ENST00000531558	CNOT7	Q9UIV1	285 aa	Known RBP	32.1	■■■□□ 2.73
PICALM-215	ENST00000531558	DDX19B	Q9UMR2	479 aa		32.1	■■■□□ 2.73
PICALM-215	ENST00000531558	PUM3	Q15397	648 aa	Known RBP	32.09	■■■□□ 2.73
PICALM-215	ENST00000531558	C20orf194	Q5TEA3	1177 aa		32.09	■■■□□ 2.73
PICALM-215	ENST00000531558	CHADL	Q6NUI6	762 aa		32.09	■■■□□ 2.73
PICALM-215	ENST00000531558	MICALL2	Q8IY33	904 aa		32.09	■■■□□ 2.73
PICALM-215	ENST00000531558	ADAMTSL1	Q8N6G6	1762 aa		32.09	■■■□□ 2.73
PICALM-215	ENST00000531558	SHTN1	A0MZ66	631 aa		32.08	■■■□□ 2.73
PICALM-215	ENST00000531558	IL1R1	P14778	569 aa		32.08	■■■□□ 2.73
PICALM-215	ENST00000531558	DACT2	Q5SW24	774 aa		32.08	■■■□□ 2.73
PICALM-215	ENST00000531558	STRIP1	Q5VSL9	837 aa		32.08	■■■□□ 2.73
PICALM-215	ENST00000531558	USP50	Q70EL3	339 aa	Predicted RBP	32.08	■■■□□ 2.73
PICALM-215	ENST00000531558	FGFR2	P21802	821 aa		32.07	■■■□□ 2.72
PICALM-215	ENST00000531558	GYG1	P46976	350 aa		32.07	■■■□□ 2.72
PICALM-215	ENST00000531558	AGBL3	Q8NEM8	1001 aa		32.07	■■■□□ 2.72
PICALM-215	ENST00000531558	FBXW7	Q969H0	707 aa		32.07	■■■□□ 2.72
PICALM-215	ENST00000531558		H7C1D1	291 aa		32.06	■■■□□ 2.72
PICALM-215	ENST00000531558	ATP8B2	P98198	1209 aa		32.06	■■■□□ 2.72
PICALM-215	ENST00000531558	FAM84B	Q96KN1	310 aa	Predicted RBP	32.06	■■■□□ 2.72
PICALM-215	ENST00000531558	CEP126	Q9P2H0	1117 aa		32.06	■■■□□ 2.72
PICALM-215	ENST00000531558	HIBADH	P31937	336 aa	Known RBP	32.05	■■■□□ 2.72
PICALM-215	ENST00000531558	POLA2	Q14181	598 aa		32.05	■■■□□ 2.72
PICALM-215	ENST00000531558	TTLL5	Q6EMB2	1281 aa		32.05	■■■□□ 2.72
PICALM-215	ENST00000531558	GML	Q99445	158 aa		32.05	■■■□□ 2.72
PICALM-215	ENST00000531558	CLEC11A	Q9Y240	323 aa		32.05	■■■□□ 2.72
PICALM-215	ENST00000531558	GTF2I	P78347	998 aa		32.04	■■■□□ 2.72
PICALM-215	ENST00000531558	SSH3	Q8TE77	659 aa		32.04	■■■□□ 2.72
PICALM-215	ENST00000531558	LPIN2	Q92539	896 aa		32.04	■■■□□ 2.72
PICALM-215	ENST00000531558	ZNF646	O15015	1829 aa	Predicted RBP	32.04	■■■□□ 2.72
PICALM-215	ENST00000531558	MYO3B	Q8WXR4	1341 aa		32.03	■■■□□ 2.72
PICALM-215	ENST00000531558	IFIT1	P09914	478 aa	Known RBP	32.03	■■■□□ 2.72
PICALM-215	ENST00000531558	CEP85	Q6P2H3	762 aa		32.03	■■■□□ 2.72
PICALM-215	ENST00000531558	TRPM4	Q8TD43	1214 aa		32.03	■■■□□ 2.72
PICALM-215	ENST00000531558	MXD3	Q9BW11	206 aa		32.03	■■■□□ 2.72
PICALM-215	ENST00000531558	SLC5A1	P13866	664 aa		32.02	■■■□□ 2.72
PICALM-215	ENST00000531558	HSPA6	P17066	643 aa		32.02	■■■□□ 2.72
PICALM-215	ENST00000531558	CAVIN4	Q5BKX8	364 aa		32.02	■■■□□ 2.72
PICALM-215	ENST00000531558	FBXO33	Q7Z6M2	555 aa		32.02	■■■□□ 2.72
PICALM-215	ENST00000531558	CHMP4B	Q9H444	224 aa	Known RBP	32.02	■■■□□ 2.72
PICALM-215	ENST00000531558	ZBTB40	Q9NUA8	1239 aa		32.02	■■■□□ 2.72
PICALM-215	ENST00000531558	ATP2B3	Q16720	1220 aa		32.01	■■■□□ 2.71
PICALM-215	ENST00000531558	VPS37D	Q86XT2	251 aa		32.01	■■■□□ 2.71
PICALM-215	ENST00000531558	TDRD7	Q8NHU6	1098 aa	Known RBP	32.01	■■■□□ 2.71
PICALM-215	ENST00000531558	RRP1	P56182	461 aa	Known RBP	32	■■■□□ 2.71
PICALM-215	ENST00000531558	ZNF280A	P59817	542 aa	Predicted RBP	32	■■■□□ 2.71
PICALM-215	ENST00000531558	SAMD7	Q7Z3H4	446 aa		32	■■■□□ 2.71
PICALM-215	ENST00000531558	SASH1	O94885	1247 aa		31.99	■■■□□ 2.71
PICALM-215	ENST00000531558	USP17L8	P0C7I0	530 aa		31.99	■■■□□ 2.71
PICALM-215	ENST00000531558	HIRA	P54198	1017 aa	Predicted RBP	31.99	■■■□□ 2.71
PICALM-215	ENST00000531558	G3BP1	Q13283	466 aa	Known RBP eCLIP	31.98	■■■□□ 2.71
PICALM-215	ENST00000531558	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	31.98	■■■□□ 2.71
PICALM-215	ENST00000531558	MAP1S	Q66K74	1059 aa	Predicted RBP	31.98	■■■□□ 2.71
PICALM-215	ENST00000531558	EGFR	P00533	1210 aa		31.97	■■■□□ 2.71
PICALM-215	ENST00000531558	BCAM	P50895	628 aa		31.97	■■■□□ 2.71
PICALM-215	ENST00000531558	TFCP2	Q12800	502 aa		31.97	■■■□□ 2.71
PICALM-215	ENST00000531558	FAM205A	Q6ZU69	1335 aa		31.97	■■■□□ 2.71
PICALM-215	ENST00000531558	KIF4B	Q2VIQ3	1234 aa		31.96	■■■□□ 2.71
PICALM-215	ENST00000531558	CERS5	Q8N5B7	392 aa		31.96	■■■□□ 2.71
PICALM-215	ENST00000531558	ZC3H15	Q8WU90	426 aa	Known RBP	31.96	■■■□□ 2.71
PICALM-215	ENST00000531558	JAG2	Q9Y219	1238 aa		31.96	■■■□□ 2.71
PICALM-215	ENST00000531558	FKBP1A	P62942	108 aa	Known RBP	31.95	■■■□□ 2.71
PICALM-215	ENST00000531558	RBM26	Q5T8P6	1007 aa	Known RBP	31.95	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms