RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 NBPF9Q3BBW0 867 aa23.25■■□□□ 1.31
SCN4B-205ENST00000531550 METTL22Q9BUU2 404 aaPredicted RBP23.25■■□□□ 1.31
SCN4B-205ENST00000531550 WTIPA6NIX2 430 aaPredicted RBP23.24■■□□□ 1.31
SCN4B-205ENST00000531550 ELL2O00472 640 aaPredicted RBP23.24■■□□□ 1.31
SCN4B-205ENST00000531550 CTSWP56202 376 aa23.24■■□□□ 1.31
SCN4B-205ENST00000531550 CDC5LQ99459 802 aaKnown RBP23.24■■□□□ 1.31
SCN4B-205ENST00000531550 TTLL12Q14166 644 aaPredicted RBP23.23■■□□□ 1.31
SCN4B-205ENST00000531550 DACT2Q5SW24 774 aa23.23■■□□□ 1.31
SCN4B-205ENST00000531550 MXD3Q9BW11 206 aa23.23■■□□□ 1.31
SCN4B-205ENST00000531550 IFT57Q9NWB7 429 aa23.23■■□□□ 1.31
SCN4B-205ENST00000531550 TM4SF4P48230 202 aa23.22■■□□□ 1.31
SCN4B-205ENST00000531550 MYH3P11055 1940 aa23.21■■□□□ 1.31
SCN4B-205ENST00000531550 WNT10BO00744 389 aa23.21■■□□□ 1.31
SCN4B-205ENST00000531550 DDX58O95786 925 aaKnown RBP23.21■■□□□ 1.31
SCN4B-205ENST00000531550 MINPP1Q9UNW1 487 aa23.21■■□□□ 1.31
SCN4B-205ENST00000531550 MYO3BQ8WXR4 1341 aa23.2■■□□□ 1.3
SCN4B-205ENST00000531550 GPR25O00155 361 aa23.2■■□□□ 1.3
SCN4B-205ENST00000531550 NF2P35240 595 aa23.2■■□□□ 1.3
SCN4B-205ENST00000531550 GNAI1P63096 354 aa23.2■■□□□ 1.3
SCN4B-205ENST00000531550 MKRN3Q13064 507 aaKnown RBP23.2■■□□□ 1.3
SCN4B-205ENST00000531550 NOM1Q5C9Z4 860 aaKnown RBP23.2■■□□□ 1.3
SCN4B-205ENST00000531550 OGFOD1Q8N543 542 aa23.2■■□□□ 1.3
SCN4B-205ENST00000531550 FBXW7Q969H0 707 aa23.2■■□□□ 1.3
SCN4B-205ENST00000531550 BSDC1Q9NW68 430 aaPredicted RBP23.2■■□□□ 1.3
SCN4B-205ENST00000531550 MAP3K2Q9Y2U5 619 aa23.2■■□□□ 1.3
SCN4B-205ENST00000531550 CCT4P50991 539 aaKnown RBP23.19■■□□□ 1.3
SCN4B-205ENST00000531550 STRIP1Q5VSL9 837 aa23.19■■□□□ 1.3
SCN4B-205ENST00000531550 C8orf58Q8NAV2 365 aa23.19■■□□□ 1.3
SCN4B-205ENST00000531550 TTLL11Q8NHH1 800 aa23.19■■□□□ 1.3
SCN4B-205ENST00000531550 GREM2Q9H772 168 aa23.19■■□□□ 1.3
SCN4B-205ENST00000531550 SASH1O94885 1247 aa23.18■■□□□ 1.3
SCN4B-205ENST00000531550 SREBF2Q12772 1141 aa23.18■■□□□ 1.3
SCN4B-205ENST00000531550 CCDC184Q52MB2 194 aa23.18■■□□□ 1.3
SCN4B-205ENST00000531550 FBXO46Q6PJ61 603 aaPredicted RBP23.18■■□□□ 1.3
SCN4B-205ENST00000531550 COA1Q9GZY4 146 aa23.18■■□□□ 1.3
SCN4B-205ENST00000531550 IGKV5-2P06315 115 aa23.17■■□□□ 1.3
SCN4B-205ENST00000531550 CALD1Q05682 793 aaKnown RBP23.17■■□□□ 1.3
SCN4B-205ENST00000531550 CCDC30Q5VVM6 783 aa23.17■■□□□ 1.3
SCN4B-205ENST00000531550 MRS2Q9HD23 443 aa23.17■■□□□ 1.3
SCN4B-205ENST00000531550 PTPN12Q05209 780 aaKnown RBP23.16■■□□□ 1.3
SCN4B-205ENST00000531550 ARMC9Q7Z3E5 817 aa23.16■■□□□ 1.3
SCN4B-205ENST00000531550 TXNRD3Q86VQ6 643 aa23.16■■□□□ 1.3
SCN4B-205ENST00000531550 CFHR5Q9BXR6 569 aa23.16■■□□□ 1.3
SCN4B-205ENST00000531550 APAF1O14727 1248 aa23.15■■□□□ 1.3
SCN4B-205ENST00000531550 FKTNO75072 461 aa23.15■■□□□ 1.3
SCN4B-205ENST00000531550 MMP14P50281 582 aa23.15■■□□□ 1.3
SCN4B-205ENST00000531550 APOBEC3FQ8IUX4 373 aaKnown RBP23.15■■□□□ 1.3
SCN4B-205ENST00000531550 PRKG1Q13976 671 aa23.14■■□□□ 1.29
SCN4B-205ENST00000531550 KSR2Q6VAB6 950 aa23.14■■□□□ 1.29
SCN4B-205ENST00000531550 R3HDMLQ9H3Y0 253 aa23.14■■□□□ 1.29
SCN4B-205ENST00000531550 LEMD3Q9Y2U8 911 aa23.14■■□□□ 1.29
SCN4B-205ENST00000531550 PI4KAP2A4QPH2 592 aa23.13■■□□□ 1.29
SCN4B-205ENST00000531550 PI4KAP1Q8N8J0 262 aa23.13■■□□□ 1.29
SCN4B-205ENST00000531550 CHMP4AQ9BY43 222 aa23.13■■□□□ 1.29
SCN4B-205ENST00000531550 COL1A1P02452 1464 aaPredicted RBP23.12■■□□□ 1.29
SCN4B-205ENST00000531550 KLRK1P26718 216 aa23.12■■□□□ 1.29
SCN4B-205ENST00000531550 IGHMBP2P38935 993 aaKnown RBP23.12■■□□□ 1.29
SCN4B-205ENST00000531550 CWF19L2Q2TBE0 894 aaKnown RBP23.12■■□□□ 1.29
SCN4B-205ENST00000531550 LDLRAD1Q5T700 205 aa23.12■■□□□ 1.29
SCN4B-205ENST00000531550 SPRYD7Q5W111 196 aa23.12■■□□□ 1.29
SCN4B-205ENST00000531550 TTLL5Q6EMB2 1281 aa23.12■■□□□ 1.29
SCN4B-205ENST00000531550 KIAA0825Q8IV33 1275 aa23.12■■□□□ 1.29
SCN4B-205ENST00000531550 TSPYL6Q8N831 410 aa23.12■■□□□ 1.29
SCN4B-205ENST00000531550 ZBED3Q96IU2 234 aaPredicted RBP23.12■■□□□ 1.29
SCN4B-205ENST00000531550 ZNF804BA4D1E1 1349 aa23.11■■□□□ 1.29
SCN4B-205ENST00000531550 NEURL1BA8MQ27 555 aa23.11■■□□□ 1.29
SCN4B-205ENST00000531550 NEXNQ0ZGT2 675 aa23.11■■□□□ 1.29
SCN4B-205ENST00000531550 ANGEL1Q9UNK9 670 aaKnown RBP23.11■■□□□ 1.29
SCN4B-205ENST00000531550 LAMB1P07942 1786 aa23.09■■□□□ 1.29
SCN4B-205ENST00000531550 ALDH1A1P00352 501 aa23.09■■□□□ 1.29
SCN4B-205ENST00000531550 GTF2IP78347 998 aa23.09■■□□□ 1.29
SCN4B-205ENST00000531550 UBE3BQ7Z3V4 1068 aa23.09■■□□□ 1.29
SCN4B-205ENST00000531550 FZD1Q9UP38 647 aa23.09■■□□□ 1.29
SCN4B-205ENST00000531550 H7C1W4 665 aa23.08■■□□□ 1.29
SCN4B-205ENST00000531550 ANKRD2Q9GZV1 360 aa23.08■■□□□ 1.29
SCN4B-205ENST00000531550 SSC5DA1L4H1 1573 aa23.08■■□□□ 1.29
SCN4B-205ENST00000531550 ECM29Q5VYK3 1845 aa23.08■■□□□ 1.28
SCN4B-205ENST00000531550 HTTP42858 3142 aa23.07■■□□□ 1.28
SCN4B-205ENST00000531550 MANSC4A6NHS7 340 aaPredicted RBP23.07■■□□□ 1.28
SCN4B-205ENST00000531550 ITGA6P23229 1130 aa23.07■■□□□ 1.28
SCN4B-205ENST00000531550 STK31Q9BXU1 1019 aa23.07■■□□□ 1.28
SCN4B-205ENST00000531550 MAP3K11Q16584 847 aa23.06■■□□□ 1.28
SCN4B-205ENST00000531550 IFNL1Q8IU54 200 aa23.06■■□□□ 1.28
SCN4B-205ENST00000531550 MPHOSPH8Q99549 860 aa23.06■■□□□ 1.28
SCN4B-205ENST00000531550 PLA2G12BQ9BX93 195 aa23.06■■□□□ 1.28
SCN4B-205ENST00000531550 DEFB129Q9H1M3 183 aa23.06■■□□□ 1.28
SCN4B-205ENST00000531550 DLGAP5Q15398 846 aa23.05■■□□□ 1.28
SCN4B-205ENST00000531550 SLC10A4Q96EP9 437 aa23.05■■□□□ 1.28
SCN4B-205ENST00000531550 CD209Q9NNX6 404 aa23.05■■□□□ 1.28
SCN4B-205ENST00000531550 TRIM17Q9Y577 477 aa23.05■■□□□ 1.28
SCN4B-205ENST00000531550 ZBTB48P10074 688 aaPredicted RBP23.04■■□□□ 1.28
SCN4B-205ENST00000531550 KCNJ4P48050 445 aa23.04■■□□□ 1.28
SCN4B-205ENST00000531550 INHBEP58166 350 aa23.04■■□□□ 1.28
SCN4B-205ENST00000531550 CHRNDQ07001 517 aa23.04■■□□□ 1.28
SCN4B-205ENST00000531550 G2E3Q7L622 706 aa23.04■■□□□ 1.28
SCN4B-205ENST00000531550 CERS5Q8N5B7 392 aa23.04■■□□□ 1.28
SCN4B-205ENST00000531550 TSR2Q969E8 191 aaKnown RBP23.04■■□□□ 1.28
SCN4B-205ENST00000531550 WNK4Q96J92 1243 aa23.04■■□□□ 1.28
SCN4B-205ENST00000531550 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.04■■□□□ 1.28
SCN4B-205ENST00000531550 PPP2R3BQ9Y5P8 575 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms