RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 PRAMEF18Q5VWM3 479 aa11.92□□□□□ -0.5
CHMP4A-205ENST00000531158 TXNRD3Q86VQ6 643 aa11.92□□□□□ -0.5
CHMP4A-205ENST00000531158 METTL22Q9BUU2 404 aaPredicted RBP11.92□□□□□ -0.5
CHMP4A-205ENST00000531158 MED23Q9ULK4 1368 aa11.92□□□□□ -0.5
CHMP4A-205ENST00000531158 PITPNM2Q9BZ72 1349 aa11.91□□□□□ -0.5
CHMP4A-205ENST00000531158 WDR43Q15061 677 aaKnown RBP eCLIP11.91□□□□□ -0.5
CHMP4A-205ENST00000531158 CCDC152Q4G0S7 254 aa11.91□□□□□ -0.5
CHMP4A-205ENST00000531158 DACT2Q5SW24 774 aa11.91□□□□□ -0.5
CHMP4A-205ENST00000531158 TSPYL6Q8N831 410 aa11.91□□□□□ -0.5
CHMP4A-205ENST00000531158 IFT57Q9NWB7 429 aa11.91□□□□□ -0.5
CHMP4A-205ENST00000531158 CWC25Q9NXE8 425 aaPredicted RBP11.91□□□□□ -0.5
CHMP4A-205ENST00000531158 SSC5DA1L4H1 1573 aa11.9□□□□□ -0.5
CHMP4A-205ENST00000531158 USP17L3A6NCW0 530 aa11.9□□□□□ -0.5
CHMP4A-205ENST00000531158 USP17L4A6NCW7 530 aa11.9□□□□□ -0.5
CHMP4A-205ENST00000531158 UBE2Q2LH0YL09 131 aa11.9□□□□□ -0.5
CHMP4A-205ENST00000531158 APAF1O14727 1248 aa11.9□□□□□ -0.5
CHMP4A-205ENST00000531158 KLRK1P26718 216 aa11.9□□□□□ -0.5
CHMP4A-205ENST00000531158 CTSWP56202 376 aa11.9□□□□□ -0.5
CHMP4A-205ENST00000531158 FKBP1BP68106 108 aa11.9□□□□□ -0.5
CHMP4A-205ENST00000531158 USP17L1Q7RTZ2 530 aa11.9□□□□□ -0.5
CHMP4A-205ENST00000531158 TTLL11Q8NHH1 800 aa11.9□□□□□ -0.5
CHMP4A-205ENST00000531158 ARAP2Q8WZ64 1704 aa11.9□□□□□ -0.5
CHMP4A-205ENST00000531158 GREM2Q9H772 168 aa11.9□□□□□ -0.5
CHMP4A-205ENST00000531158 MINPP1Q9UNW1 487 aa11.9□□□□□ -0.5
CHMP4A-205ENST00000531158 MAP3K2Q9Y2U5 619 aa11.9□□□□□ -0.5
CHMP4A-205ENST00000531158 TBC1D8O95759 1140 aa11.89□□□□□ -0.51
CHMP4A-205ENST00000531158 PODNQ7Z5L7 613 aa11.89□□□□□ -0.51
CHMP4A-205ENST00000531158 ANKRD18AQ8IVF6 992 aa11.89□□□□□ -0.51
CHMP4A-205ENST00000531158 ZNF296Q8WUU4 475 aaPredicted RBP11.89□□□□□ -0.51
CHMP4A-205ENST00000531158 SZT2Q5T011 3432 aa11.89□□□□□ -0.51
CHMP4A-205ENST00000531158 G3V3G9 751 aa11.88□□□□□ -0.51
CHMP4A-205ENST00000531158 WNT10BO00744 389 aa11.88□□□□□ -0.51
CHMP4A-205ENST00000531158 SASH1O94885 1247 aa11.88□□□□□ -0.51
CHMP4A-205ENST00000531158 ATP2B4P23634 1241 aa11.88□□□□□ -0.51
CHMP4A-205ENST00000531158 GNAI1P63096 354 aa11.88□□□□□ -0.51
CHMP4A-205ENST00000531158 CWF19L2Q2TBE0 894 aaKnown RBP11.88□□□□□ -0.51
CHMP4A-205ENST00000531158 DCAF8Q5TAQ9 597 aa11.88□□□□□ -0.51
CHMP4A-205ENST00000531158 FBXO46Q6PJ61 603 aaPredicted RBP11.88□□□□□ -0.51
CHMP4A-205ENST00000531158 R3HDMLQ9H3Y0 253 aa11.88□□□□□ -0.51
CHMP4A-205ENST00000531158 KIAA0100Q14667 2235 aaKnown RBP11.88□□□□□ -0.51
CHMP4A-205ENST00000531158 IRS2Q9Y4H2 1338 aa11.87□□□□□ -0.51
CHMP4A-205ENST00000531158 PI4KAP2A4QPH2 592 aa11.87□□□□□ -0.51
CHMP4A-205ENST00000531158 CCT4P50991 539 aaKnown RBP11.87□□□□□ -0.51
CHMP4A-205ENST00000531158 G2E3Q7L622 706 aa11.87□□□□□ -0.51
CHMP4A-205ENST00000531158 PI4KAP1Q8N8J0 262 aa11.87□□□□□ -0.51
CHMP4A-205ENST00000531158 ZBED3Q96IU2 234 aaPredicted RBP11.87□□□□□ -0.51
CHMP4A-205ENST00000531158 PRKRIP1Q9H875 184 aaPredicted RBP11.87□□□□□ -0.51
CHMP4A-205ENST00000531158 BSDC1Q9NW68 430 aaPredicted RBP11.87□□□□□ -0.51
CHMP4A-205ENST00000531158 FZD1Q9UP38 647 aa11.87□□□□□ -0.51
CHMP4A-205ENST00000531158 POTEFA5A3E0 1075 aa11.86□□□□□ -0.51
CHMP4A-205ENST00000531158 NEURL1BA8MQ27 555 aa11.86□□□□□ -0.51
CHMP4A-205ENST00000531158 TM4SF4P48230 202 aa11.86□□□□□ -0.51
CHMP4A-205ENST00000531158 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
CHMP4A-205ENST00000531158 KSR2Q6VAB6 950 aa11.86□□□□□ -0.51
CHMP4A-205ENST00000531158 REM2Q8IYK8 340 aaPredicted RBP11.86□□□□□ -0.51
CHMP4A-205ENST00000531158 TSR2Q969E8 191 aaKnown RBP11.86□□□□□ -0.51
CHMP4A-205ENST00000531158 AOX1Q06278 1338 aa11.86□□□□□ -0.51
CHMP4A-205ENST00000531158 H7C1W4 665 aa11.85□□□□□ -0.51
CHMP4A-205ENST00000531158 HSP90B1P14625 803 aaKnown RBP11.85□□□□□ -0.51
CHMP4A-205ENST00000531158 CASP7P55210 303 aa11.85□□□□□ -0.51
CHMP4A-205ENST00000531158 PTPN12Q05209 780 aaKnown RBP11.85□□□□□ -0.51
CHMP4A-205ENST00000531158 STRIP1Q5VSL9 837 aa11.85□□□□□ -0.51
CHMP4A-205ENST00000531158 UBE3BQ7Z3V4 1068 aa11.85□□□□□ -0.51
CHMP4A-205ENST00000531158 CDC5LQ99459 802 aaKnown RBP11.85□□□□□ -0.51
CHMP4A-205ENST00000531158 PCDHAC2Q9Y5I4 1007 aa11.85□□□□□ -0.51
CHMP4A-205ENST00000531158 ZSWIM8A7E2V4 1837 aa11.85□□□□□ -0.51
CHMP4A-205ENST00000531158 CEP290O15078 2479 aa11.84□□□□□ -0.51
CHMP4A-205ENST00000531158 GPR25O00155 361 aa11.84□□□□□ -0.51
CHMP4A-205ENST00000531158 SNAP23O00161 211 aa11.84□□□□□ -0.51
CHMP4A-205ENST00000531158 CCDC184Q52MB2 194 aa11.84□□□□□ -0.51
CHMP4A-205ENST00000531158 LDLRAD1Q5T700 205 aa11.84□□□□□ -0.51
CHMP4A-205ENST00000531158 CCDC30Q5VVM6 783 aa11.84□□□□□ -0.51
CHMP4A-205ENST00000531158 CERS5Q8N5B7 392 aa11.84□□□□□ -0.51
CHMP4A-205ENST00000531158 COA1Q9GZY4 146 aa11.84□□□□□ -0.51
CHMP4A-205ENST00000531158 ZNF804BA4D1E1 1349 aa11.84□□□□□ -0.51
CHMP4A-205ENST00000531158 MYO3BQ8WXR4 1341 aa11.84□□□□□ -0.51
CHMP4A-205ENST00000531158 A0A0C4DFX4 3053 aa11.83□□□□□ -0.52
CHMP4A-205ENST00000531158 DDX58O95786 925 aaKnown RBP11.83□□□□□ -0.52
CHMP4A-205ENST00000531158 PRKG1Q13976 671 aa11.83□□□□□ -0.52
CHMP4A-205ENST00000531158 NOM1Q5C9Z4 860 aaKnown RBP11.83□□□□□ -0.52
CHMP4A-205ENST00000531158 KIAA0825Q8IV33 1275 aa11.83□□□□□ -0.52
CHMP4A-205ENST00000531158 FBXW7Q969H0 707 aa11.83□□□□□ -0.52
CHMP4A-205ENST00000531158 CFHR5Q9BXR6 569 aa11.83□□□□□ -0.52
CHMP4A-205ENST00000531158 COL1A1P02452 1464 aaPredicted RBP11.83□□□□□ -0.52
CHMP4A-205ENST00000531158 ITGA6P23229 1130 aa11.82□□□□□ -0.52
CHMP4A-205ENST00000531158 MNX1P50219 401 aaPredicted RBP11.82□□□□□ -0.52
CHMP4A-205ENST00000531158 TTLL12Q14166 644 aaPredicted RBP11.82□□□□□ -0.52
CHMP4A-205ENST00000531158 GCKRQ14397 625 aa11.82□□□□□ -0.52
CHMP4A-205ENST00000531158 SPRYD7Q5W111 196 aa11.82□□□□□ -0.52
CHMP4A-205ENST00000531158 INTS3Q68E01 1043 aaKnown RBP11.82□□□□□ -0.52
CHMP4A-205ENST00000531158 CLMNQ96JQ2 1002 aa11.82□□□□□ -0.52
CHMP4A-205ENST00000531158 PLA2G12BQ9BX93 195 aa11.82□□□□□ -0.52
CHMP4A-205ENST00000531158 CSF1RP07333 972 aa11.81□□□□□ -0.52
CHMP4A-205ENST00000531158 GTF2IP78347 998 aa11.81□□□□□ -0.52
CHMP4A-205ENST00000531158 CAP1Q01518 475 aa11.81□□□□□ -0.52
CHMP4A-205ENST00000531158 CALD1Q05682 793 aaKnown RBP11.81□□□□□ -0.52
CHMP4A-205ENST00000531158 TTLL5Q6EMB2 1281 aa11.81□□□□□ -0.52
CHMP4A-205ENST00000531158 MIER1Q8N108 512 aa11.81□□□□□ -0.52
CHMP4A-205ENST00000531158 OGFOD1Q8N543 542 aa11.81□□□□□ -0.52
CHMP4A-205ENST00000531158 LEMD3Q9Y2U8 911 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 294.4 ms