RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 BEGAINQ9BUH8 593 aa20.12■□□□□ 0.81
CPSF1-205ENST00000531042 GGA3Q9NZ52 723 aa20.11■□□□□ 0.81
CPSF1-205ENST00000531042 LEMD3Q9Y2U8 911 aa20.11■□□□□ 0.81
CPSF1-205ENST00000531042 ASTN2O75129 1339 aaPredicted RBP20.1■□□□□ 0.81
CPSF1-205ENST00000531042 F6X3S4 739 aa20.1■□□□□ 0.81
CPSF1-205ENST00000531042 USP17L8P0C7I0 530 aa20.1■□□□□ 0.81
CPSF1-205ENST00000531042 HUNKP57058 714 aa20.1■□□□□ 0.81
CPSF1-205ENST00000531042 BEND3Q5T5X7 828 aa20.1■□□□□ 0.81
CPSF1-205ENST00000531042 MPHOSPH8Q99549 860 aa20.1■□□□□ 0.81
CPSF1-205ENST00000531042 ANKRD2Q9GZV1 360 aa20.1■□□□□ 0.81
CPSF1-205ENST00000531042 ZNF646O15015 1829 aaPredicted RBP20.1■□□□□ 0.81
CPSF1-205ENST00000531042 SCARF1Q14162 830 aa20.09■□□□□ 0.81
CPSF1-205ENST00000531042 TXNRD3Q86VQ6 643 aa20.09■□□□□ 0.81
CPSF1-205ENST00000531042 SULF1Q8IWU6 871 aa20.09■□□□□ 0.81
CPSF1-205ENST00000531042 COA1Q9GZY4 146 aa20.09■□□□□ 0.81
CPSF1-205ENST00000531042 GBA2Q9HCG7 927 aaPredicted RBP20.09■□□□□ 0.81
CPSF1-205ENST00000531042 MYOZ2Q9NPC6 264 aa20.09■□□□□ 0.81
CPSF1-205ENST00000531042 ZNF804BA4D1E1 1349 aa20.08■□□□□ 0.81
CPSF1-205ENST00000531042 DACT2Q5SW24 774 aa20.08■□□□□ 0.81
CPSF1-205ENST00000531042 C2orf69Q8N8R5 385 aa20.08■□□□□ 0.81
CPSF1-205ENST00000531042 ANKRD18BA2A2Z9 1011 aa20.07■□□□□ 0.8
CPSF1-205ENST00000531042 BRPF1P55201 1214 aaPredicted RBP20.07■□□□□ 0.8
CPSF1-205ENST00000531042 FOXO4P98177 505 aa20.07■□□□□ 0.8
CPSF1-205ENST00000531042 ANGEL2Q5VTE6 544 aaKnown RBP20.07■□□□□ 0.8
CPSF1-205ENST00000531042 CHRNDQ07001 517 aa20.06■□□□□ 0.8
CPSF1-205ENST00000531042 NOGQ13253 232 aa20.06■□□□□ 0.8
CPSF1-205ENST00000531042 STRIP1Q5VSL9 837 aa20.06■□□□□ 0.8
CPSF1-205ENST00000531042 MXD3Q9BW11 206 aa20.06■□□□□ 0.8
CPSF1-205ENST00000531042 ZNF521Q96K83 1311 aa20.05■□□□□ 0.8
CPSF1-205ENST00000531042 KLRK1P26718 216 aa20.05■□□□□ 0.8
CPSF1-205ENST00000531042 RGMBQ6NW40 437 aa20.05■□□□□ 0.8
CPSF1-205ENST00000531042 FBXW7Q969H0 707 aa20.05■□□□□ 0.8
CPSF1-205ENST00000531042 CDCA5Q96FF9 252 aa20.05■□□□□ 0.8
CPSF1-205ENST00000531042 MYO3BQ8WXR4 1341 aa20.04■□□□□ 0.8
CPSF1-205ENST00000531042 PITPNM2Q9BZ72 1349 aa20.04■□□□□ 0.8
CPSF1-205ENST00000531042 FAM155AB1AL88 458 aaPredicted RBP20.04■□□□□ 0.8
CPSF1-205ENST00000531042 CA12O43570 354 aa20.04■□□□□ 0.8
CPSF1-205ENST00000531042 IFIT5Q13325 482 aaKnown RBP20.04■□□□□ 0.8
CPSF1-205ENST00000531042 ZIC5Q96T25 663 aa20.04■□□□□ 0.8
CPSF1-205ENST00000531042 TSKSQ9UJT2 592 aa20.04■□□□□ 0.8
CPSF1-205ENST00000531042 A0A1B0GUL6 1792 aa20.03■□□□□ 0.8
CPSF1-205ENST00000531042 GRM8O00222 908 aa20.03■□□□□ 0.8
CPSF1-205ENST00000531042 KCNJ4P48050 445 aa20.03■□□□□ 0.8
CPSF1-205ENST00000531042 EPHA10Q5JZY3 1008 aa20.03■□□□□ 0.8
CPSF1-205ENST00000531042 TTLL5Q6EMB2 1281 aa20.03■□□□□ 0.8
CPSF1-205ENST00000531042 LMBR1LQ6UX01 489 aa20.03■□□□□ 0.8
CPSF1-205ENST00000531042 OGFOD1Q8N543 542 aa20.03■□□□□ 0.8
CPSF1-205ENST00000531042 CHMP3Q9Y3E7 222 aa20.03■□□□□ 0.8
CPSF1-205ENST00000531042 TAF5LO75529 589 aa20.02■□□□□ 0.8
CPSF1-205ENST00000531042 NBPF9Q3BBW0 867 aa20.02■□□□□ 0.8
CPSF1-205ENST00000531042 CCDC102AQ96A19 550 aa20.02■□□□□ 0.8
CPSF1-205ENST00000531042 IRS2Q9Y4H2 1338 aa20.02■□□□□ 0.79
CPSF1-205ENST00000531042 SNAP23O00161 211 aa20.01■□□□□ 0.79
CPSF1-205ENST00000531042 ALDH1L1O75891 902 aa20.01■□□□□ 0.79
CPSF1-205ENST00000531042 MMP14P50281 582 aa20.01■□□□□ 0.79
CPSF1-205ENST00000531042 ZNF157P51786 506 aaPredicted RBP20.01■□□□□ 0.79
CPSF1-205ENST00000531042 SLC4A10Q6U841 1118 aa20.01■□□□□ 0.79
CPSF1-205ENST00000531042 C15orf52Q6ZUT6 534 aaKnown RBP20.01■□□□□ 0.79
CPSF1-205ENST00000531042 HELBQ8NG08 1087 aaPredicted RBP20.01■□□□□ 0.79
CPSF1-205ENST00000531042 CD209Q9NNX6 404 aa20.01■□□□□ 0.79
CPSF1-205ENST00000531042 C9orf78Q9NZ63 289 aaPredicted RBP20.01■□□□□ 0.79
CPSF1-205ENST00000531042 WNT10BO00744 389 aa20■□□□□ 0.79
CPSF1-205ENST00000531042 GTF2IP78347 998 aa20■□□□□ 0.79
CPSF1-205ENST00000531042 CCDC57Q2TAC2 916 aa20■□□□□ 0.79
CPSF1-205ENST00000531042 SRCIN1Q9C0H9 1055 aa20■□□□□ 0.79
CPSF1-205ENST00000531042 SCAF8Q9UPN6 1271 aaKnown RBP20■□□□□ 0.79
CPSF1-205ENST00000531042 FKBP1BP68106 108 aa19.99■□□□□ 0.79
CPSF1-205ENST00000531042 ZNF594Q96JF6 807 aaPredicted RBP19.99■□□□□ 0.79
CPSF1-205ENST00000531042 PAPPA2Q9BXP8 1791 aa19.98■□□□□ 0.79
CPSF1-205ENST00000531042 SLC10A3P09131 477 aa19.98■□□□□ 0.79
CPSF1-205ENST00000531042 KIF23Q02241 960 aaPredicted RBP19.98■□□□□ 0.79
CPSF1-205ENST00000531042 LDHAL6AQ6ZMR3 332 aa19.98■□□□□ 0.79
CPSF1-205ENST00000531042 KIAA0825Q8IV33 1275 aa19.98■□□□□ 0.79
CPSF1-205ENST00000531042 TAF7LQ5H9L4 462 aa19.97■□□□□ 0.79
CPSF1-205ENST00000531042 ABHD8Q96I13 439 aa19.97■□□□□ 0.79
CPSF1-205ENST00000531042 HDAC9Q9UKV0 1011 aa19.97■□□□□ 0.79
CPSF1-205ENST00000531042 CASP8AP2Q9UKL3 1982 aa19.96■□□□□ 0.79
CPSF1-205ENST00000531042 SASH1O94885 1247 aa19.96■□□□□ 0.79
CPSF1-205ENST00000531042 IL1R1P14778 569 aa19.96■□□□□ 0.79
CPSF1-205ENST00000531042 PRAMEF18Q5VWM3 479 aa19.96■□□□□ 0.79
CPSF1-205ENST00000531042 ZNF804AQ7Z570 1209 aa19.96■□□□□ 0.79
CPSF1-205ENST00000531042 MRPL50Q8N5N7 158 aaKnown RBP19.96■□□□□ 0.79
CPSF1-205ENST00000531042 SUCLG2Q96I99 432 aa19.96■□□□□ 0.79
CPSF1-205ENST00000531042 CNNM1Q9NRU3 951 aa19.96■□□□□ 0.79
CPSF1-205ENST00000531042 E9PSI1 815 aa19.95■□□□□ 0.78
CPSF1-205ENST00000531042 PLIN1O60240 522 aa19.95■□□□□ 0.78
CPSF1-205ENST00000531042 NBPF7P0C2Y1 421 aaPredicted RBP19.95■□□□□ 0.78
CPSF1-205ENST00000531042 KAZALD1Q96I82 304 aa19.95■□□□□ 0.78
CPSF1-205ENST00000531042 ZBED3Q96IU2 234 aaPredicted RBP19.95■□□□□ 0.78
CPSF1-205ENST00000531042 UTYO14607 1347 aa19.95■□□□□ 0.78
CPSF1-205ENST00000531042 MOB2Q70IA6 237 aa19.94■□□□□ 0.78
CPSF1-205ENST00000531042 RASAL3Q86YV0 1011 aa19.94■□□□□ 0.78
CPSF1-205ENST00000531042 CERS5Q8N5B7 392 aa19.94■□□□□ 0.78
CPSF1-205ENST00000531042 SAGE1Q9NXZ1 904 aa19.94■□□□□ 0.78
CPSF1-205ENST00000531042 CSRNP1Q96S65 589 aa19.93■□□□□ 0.78
CPSF1-205ENST00000531042 AKAP11Q9UKA4 1901 aa19.93■□□□□ 0.78
CPSF1-205ENST00000531042 UBE2Q2LH0YL09 131 aa19.92■□□□□ 0.78
CPSF1-205ENST00000531042 FKBP1AP62942 108 aaKnown RBP19.92■□□□□ 0.78
CPSF1-205ENST00000531042 SLFN5Q08AF3 891 aa19.92■□□□□ 0.78
CPSF1-205ENST00000531042 APOBEC3FQ8IUX4 373 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms