RNA–Protein interactions for RNA: ENST00000530786.5

BDNF-214, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-214ENST00000530786 NMIQ13287 307 aaPredicted RBP8.84□□□□□ -0.99
BDNF-214ENST00000530786 TRIM34Q9BYJ4 488 aa8.84□□□□□ -0.99
BDNF-214ENST00000530786 SLKQ9H2G2 1235 aaPredicted RBP8.84□□□□□ -0.99
BDNF-214ENST00000530786 KIF3AQ9Y496 699 aa8.84□□□□□ -0.99
BDNF-214ENST00000530786 ZNF804BA4D1E1 1349 aa8.84□□□□□ -0.99
BDNF-214ENST00000530786 ERICH2A1L162 156 aa8.83□□□□□ -1
BDNF-214ENST00000530786 SPATA5Q8NB90 893 aa8.83□□□□□ -1
BDNF-214ENST00000530786 SUPT20HQ8NEM7 779 aa8.83□□□□□ -1
BDNF-214ENST00000530786 IL27Q8NEV9 243 aa8.83□□□□□ -1
BDNF-214ENST00000530786 UBE2Q2Q8WVN8 375 aa8.83□□□□□ -1
BDNF-214ENST00000530786 MASTLQ96GX5 879 aa8.83□□□□□ -1
BDNF-214ENST00000530786 TLR7Q9NYK1 1049 aaKnown RBP8.83□□□□□ -1
BDNF-214ENST00000530786 RIPOR2Q9Y4F9 1068 aa8.83□□□□□ -1
BDNF-214ENST00000530786 PPEF1O14829 653 aaPredicted RBP8.83□□□□□ -1
BDNF-214ENST00000530786 BAG3O95817 575 aa8.83□□□□□ -1
BDNF-214ENST00000530786 PRPF40BQ6NWY9 871 aaKnown RBP8.83□□□□□ -1
BDNF-214ENST00000530786 ATG9AQ7Z3C6 839 aa8.83□□□□□ -1
BDNF-214ENST00000530786 HELLSQ9NRZ9 838 aa8.83□□□□□ -1
BDNF-214ENST00000530786 CYP7A1P22680 504 aa8.83□□□□□ -1
BDNF-214ENST00000530786 ZAP70P43403 619 aa8.83□□□□□ -1
BDNF-214ENST00000530786 NAA16Q6N069 864 aaPredicted RBP8.83□□□□□ -1
BDNF-214ENST00000530786 BLOC1S2Q6QNY1 142 aa8.83□□□□□ -1
BDNF-214ENST00000530786 WDR66Q8TBY9 1149 aa8.83□□□□□ -1
BDNF-214ENST00000530786 CELF1Q92879 486 aaKnown RBP8.83□□□□□ -1
BDNF-214ENST00000530786 NAPBQ9H115 298 aa8.83□□□□□ -1
BDNF-214ENST00000530786 RBM5P52756 815 aaKnown RBP eCLIP8.83□□□□□ -1
BDNF-214ENST00000530786 SART3Q15020 963 aaKnown RBP8.83□□□□□ -1
BDNF-214ENST00000530786 CPLX2Q6PUV4 134 aaKnown RBP8.83□□□□□ -1
BDNF-214ENST00000530786 RIMBP2O15034 1052 aa8.82□□□□□ -1
BDNF-214ENST00000530786 ADORA1P30542 326 aa8.82□□□□□ -1
BDNF-214ENST00000530786 ANKRD1Q15327 319 aa8.82□□□□□ -1
BDNF-214ENST00000530786 HMG20BQ9P0W2 317 aa8.82□□□□□ -1
BDNF-214ENST00000530786 MINPP1Q9UNW1 487 aa8.82□□□□□ -1
BDNF-214ENST00000530786 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.82□□□□□ -1
BDNF-214ENST00000530786 JAKMIP1Q96N16 626 aaKnown RBP8.82□□□□□ -1
BDNF-214ENST00000530786 DOT1LQ8TEK3 1739 aa8.82□□□□□ -1
BDNF-214ENST00000530786 SEMA3EO15041 775 aa8.82□□□□□ -1
BDNF-214ENST00000530786 SGSM2O43147 1006 aa8.82□□□□□ -1
BDNF-214ENST00000530786 EPB41L2O43491 1005 aaKnown RBP8.82□□□□□ -1
BDNF-214ENST00000530786 GYG1P46976 350 aa8.82□□□□□ -1
BDNF-214ENST00000530786 BCAMP50895 628 aa8.82□□□□□ -1
BDNF-214ENST00000530786 ANAPC15P60006 121 aa8.82□□□□□ -1
BDNF-214ENST00000530786 CC2D2BQ6DHV5 1058 aa8.82□□□□□ -1
BDNF-214ENST00000530786 PI4K2BQ8TCG2 481 aa8.82□□□□□ -1
BDNF-214ENST00000530786 ZNF213O14771 459 aa8.81□□□□□ -1
BDNF-214ENST00000530786 LDHBP07195 334 aaKnown RBP8.81□□□□□ -1
BDNF-214ENST00000530786 PHKA1P46020 1223 aa8.81□□□□□ -1
BDNF-214ENST00000530786 SLC4A3P48751 1232 aa8.81□□□□□ -1
BDNF-214ENST00000530786 TICAM2Q86XR7 235 aa8.81□□□□□ -1
BDNF-214ENST00000530786 APPBP2Q92624 585 aa8.81□□□□□ -1
BDNF-214ENST00000530786 CRAMP1Q96RY5 1269 aa8.81□□□□□ -1
BDNF-214ENST00000530786 GNAT2P19087 354 aa8.81□□□□□ -1
BDNF-214ENST00000530786 NCLP19338 710 aaKnown RBP8.81□□□□□ -1
BDNF-214ENST00000530786 USP5P45974 858 aa8.81□□□□□ -1
BDNF-214ENST00000530786 MAGEB6Q8N7X4 407 aa8.81□□□□□ -1
BDNF-214ENST00000530786 ATF5Q9Y2D1 282 aaPredicted RBP8.81□□□□□ -1
BDNF-214ENST00000530786 HMGB1P09429 215 aaKnown RBP8.81□□□□□ -1
BDNF-214ENST00000530786 SOGA3Q5TF21 947 aa8.81□□□□□ -1
BDNF-214ENST00000530786 TBC1D22AQ8WUA7 517 aa8.81□□□□□ -1
BDNF-214ENST00000530786 FOXD4L1Q9NU39 408 aa8.81□□□□□ -1
BDNF-214ENST00000530786 NDUFB9Q9Y6M9 179 aa8.81□□□□□ -1
BDNF-214ENST00000530786 CCDC171Q6TFL3 1326 aa8.81□□□□□ -1
BDNF-214ENST00000530786 GLI3P10071 1580 aa8.81□□□□□ -1
BDNF-214ENST00000530786 NRAPQ86VF7 1730 aa8.81□□□□□ -1
BDNF-214ENST00000530786 DCAF8L1A6NGE4 600 aa8.8□□□□□ -1
BDNF-214ENST00000530786 SEC24BO95487 1268 aa8.8□□□□□ -1
BDNF-214ENST00000530786 NFXL1Q6ZNB6 911 aa8.8□□□□□ -1
BDNF-214ENST00000530786 EDC3Q96F86 508 aaKnown RBP8.8□□□□□ -1
BDNF-214ENST00000530786 USP26Q9BXU7 913 aa8.8□□□□□ -1
BDNF-214ENST00000530786 CRNKL1Q9BZJ0 848 aaKnown RBP8.8□□□□□ -1
BDNF-214ENST00000530786 BCL2L12Q9HB09 334 aa8.8□□□□□ -1
BDNF-214ENST00000530786 TMOD2Q9NZR1 351 aa8.8□□□□□ -1
BDNF-214ENST00000530786 ISY1Q9ULR0 285 aaKnown RBP8.8□□□□□ -1
BDNF-214ENST00000530786 ZNF827Q17R98 1081 aa8.8□□□□□ -1
BDNF-214ENST00000530786 JDP2Q8WYK2 163 aa8.8□□□□□ -1
BDNF-214ENST00000530786 RBM8AQ9Y5S9 174 aaKnown RBP8.8□□□□□ -1
BDNF-214ENST00000530786 CASTP20810 708 aaKnown RBP8.8□□□□□ -1
BDNF-214ENST00000530786 RRP12Q5JTH9 1297 aaKnown RBP8.8□□□□□ -1
BDNF-214ENST00000530786 RNF41Q9H4P4 317 aaPredicted RBP8.8□□□□□ -1
BDNF-214ENST00000530786 ZNF287Q9HBT7 754 aa8.8□□□□□ -1
BDNF-214ENST00000530786 PDRG1Q9NUG6 133 aa8.8□□□□□ -1
BDNF-214ENST00000530786 MAGEB6P1A0A0J9YX57 407 aa8.8□□□□□ -1
BDNF-214ENST00000530786 CPLX1O14810 134 aa8.8□□□□□ -1
BDNF-214ENST00000530786 ZBTB7AO95365 584 aa8.8□□□□□ -1
BDNF-214ENST00000530786 ILDR1Q86SU0 546 aaPredicted RBP8.8□□□□□ -1
BDNF-214ENST00000530786 FAM227BQ96M60 508 aa8.8□□□□□ -1
BDNF-214ENST00000530786 TTLL6Q8N841 843 aa8.79□□□□□ -1
BDNF-214ENST00000530786 TAOK2Q9UL54 1235 aa8.79□□□□□ -1
BDNF-214ENST00000530786 K7ELQ4 463 aaPredicted RBP8.79□□□□□ -1
BDNF-214ENST00000530786 PLCG2P16885 1265 aa8.79□□□□□ -1
BDNF-214ENST00000530786 FAM184AQ8NB25 1140 aa8.79□□□□□ -1
BDNF-214ENST00000530786 UPF3BQ9BZI7 483 aaKnown RBP8.79□□□□□ -1
BDNF-214ENST00000530786 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.79□□□□□ -1
BDNF-214ENST00000530786 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.79□□□□□ -1
BDNF-214ENST00000530786 RTL9Q8NET4 1388 aa8.79□□□□□ -1
BDNF-214ENST00000530786 MINDY4BA8MYZ0 360 aa8.79□□□□□ -1
BDNF-214ENST00000530786 POLRMTO00411 1230 aaKnown RBP8.79□□□□□ -1
BDNF-214ENST00000530786 GRIPAP1Q4V328 841 aa8.79□□□□□ -1
BDNF-214ENST00000530786 CERS3Q8IU89 383 aa8.79□□□□□ -1
BDNF-214ENST00000530786 SP8Q8IXZ3 490 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms