RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 RILPL2Q969X0 211 aa17.56■□□□□ 0.4
TTC39A-216ENST00000530004 SNED1Q8TER0 1413 aa17.55■□□□□ 0.4
TTC39A-216ENST00000530004 CACNA1SQ13698 1873 aa17.55■□□□□ 0.4
TTC39A-216ENST00000530004 GRIPAP1Q4V328 841 aa17.55■□□□□ 0.4
TTC39A-216ENST00000530004 CASC1Q6TDU7 716 aa17.55■□□□□ 0.4
TTC39A-216ENST00000530004 SNAP23O00161 211 aa17.54■□□□□ 0.4
TTC39A-216ENST00000530004 DPP8Q6V1X1 898 aaPredicted RBP17.54■□□□□ 0.4
TTC39A-216ENST00000530004 RTKN2Q8IZC4 609 aa17.54■□□□□ 0.4
TTC39A-216ENST00000530004 GPR108Q9NPR9 543 aa17.54■□□□□ 0.4
TTC39A-216ENST00000530004 LEMD3Q9Y2U8 911 aa17.54■□□□□ 0.4
TTC39A-216ENST00000530004 WTIPA6NIX2 430 aaPredicted RBP17.53■□□□□ 0.4
TTC39A-216ENST00000530004 MAP4K4O95819 1239 aaPredicted RBP17.53■□□□□ 0.4
TTC39A-216ENST00000530004 FGFR2P21802 821 aa17.53■□□□□ 0.4
TTC39A-216ENST00000530004 ATP2B4P23634 1241 aa17.53■□□□□ 0.4
TTC39A-216ENST00000530004 UBE4AQ14139 1066 aa17.53■□□□□ 0.4
TTC39A-216ENST00000530004 PUM3Q15397 648 aaKnown RBP17.53■□□□□ 0.4
TTC39A-216ENST00000530004 TBC1D32Q96NH3 1257 aa17.53■□□□□ 0.4
TTC39A-216ENST00000530004 DBNLQ9UJU6 430 aaKnown RBP17.53■□□□□ 0.4
TTC39A-216ENST00000530004 GGA1Q9UJY5 639 aa17.53■□□□□ 0.4
TTC39A-216ENST00000530004 AKAP2Q9Y2D5 859 aa17.53■□□□□ 0.4
TTC39A-216ENST00000530004 ZNF804BA4D1E1 1349 aa17.53■□□□□ 0.4
TTC39A-216ENST00000530004 TBC1D16Q8TBP0 767 aa17.53■□□□□ 0.4
TTC39A-216ENST00000530004 POLLQ9UGP5 575 aa17.53■□□□□ 0.4
TTC39A-216ENST00000530004 A0A1B0GUL7 405 aa17.52■□□□□ 0.4
TTC39A-216ENST00000530004 UFL1O94874 794 aa17.52■□□□□ 0.4
TTC39A-216ENST00000530004 KCNJ4P48050 445 aa17.52■□□□□ 0.4
TTC39A-216ENST00000530004 ATP2B3Q16720 1220 aa17.52■□□□□ 0.4
TTC39A-216ENST00000530004 LPIN2Q92539 896 aa17.52■□□□□ 0.4
TTC39A-216ENST00000530004 RTFDC1Q9BY42 306 aaPredicted RBP17.52■□□□□ 0.4
TTC39A-216ENST00000530004 EIF5BO60841 1220 aaKnown RBP17.51■□□□□ 0.39
TTC39A-216ENST00000530004 YBX3P16989 372 aaKnown RBP eCLIP17.51■□□□□ 0.39
TTC39A-216ENST00000530004 TIMM10P62072 90 aa17.51■□□□□ 0.39
TTC39A-216ENST00000530004 CNTROBQ8N137 903 aa17.51■□□□□ 0.39
TTC39A-216ENST00000530004 PSMD1Q99460 953 aa17.51■□□□□ 0.39
TTC39A-216ENST00000530004 DBNDD2Q9BQY9 259 aa17.51■□□□□ 0.39
TTC39A-216ENST00000530004 C22orf23Q9BZE7 217 aa17.51■□□□□ 0.39
TTC39A-216ENST00000530004 GOLGB1Q14789 3259 aaKnown RBP17.51■□□□□ 0.39
TTC39A-216ENST00000530004 ZNF609O15014 1411 aa17.51■□□□□ 0.39
TTC39A-216ENST00000530004 C6orf229H3BNL8 230 aa17.51■□□□□ 0.39
TTC39A-216ENST00000530004 NEUROD6Q96NK8 337 aa17.51■□□□□ 0.39
TTC39A-216ENST00000530004 LTBP1Q14766 1721 aa17.5■□□□□ 0.39
TTC39A-216ENST00000530004 DUOX1Q9NRD9 1551 aa17.5■□□□□ 0.39
TTC39A-216ENST00000530004 IFIT1P09914 478 aaKnown RBP17.5■□□□□ 0.39
TTC39A-216ENST00000530004 SLC5A1P13866 664 aa17.5■□□□□ 0.39
TTC39A-216ENST00000530004 A0A1B0GUL6 1792 aa17.49■□□□□ 0.39
TTC39A-216ENST00000530004 KLRK1P26718 216 aa17.49■□□□□ 0.39
TTC39A-216ENST00000530004 FKBP4Q02790 459 aaKnown RBP eCLIP17.49■□□□□ 0.39
TTC39A-216ENST00000530004 GPR101Q96P66 508 aaPredicted RBP17.49■□□□□ 0.39
TTC39A-216ENST00000530004 IRS2Q9Y4H2 1338 aa17.49■□□□□ 0.39
TTC39A-216ENST00000530004 ARFGEF1Q9Y6D6 1849 aa17.48■□□□□ 0.39
TTC39A-216ENST00000530004 NFKBIEO00221 500 aa17.48■□□□□ 0.39
TTC39A-216ENST00000530004 CHMLP26374 656 aa17.48■□□□□ 0.39
TTC39A-216ENST00000530004 C15orf52Q6ZUT6 534 aaKnown RBP17.48■□□□□ 0.39
TTC39A-216ENST00000530004 SUPT20HQ8NEM7 779 aa17.48■□□□□ 0.39
TTC39A-216ENST00000530004 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
TTC39A-216ENST00000530004 TAOK3Q9H2K8 898 aa17.48■□□□□ 0.39
TTC39A-216ENST00000530004 BOLA2Q9H3K6 86 aa17.48■□□□□ 0.39
TTC39A-216ENST00000530004 MED23Q9ULK4 1368 aa17.48■□□□□ 0.39
TTC39A-216ENST00000530004 ATP5JP18859 108 aa17.48■□□□□ 0.39
TTC39A-216ENST00000530004 GPR162Q16538 588 aa17.48■□□□□ 0.39
TTC39A-216ENST00000530004 TXNRD3Q86VQ6 643 aa17.48■□□□□ 0.39
TTC39A-216ENST00000530004 XAGE2Q96GT9 111 aa17.48■□□□□ 0.39
TTC39A-216ENST00000530004 EYA3Q99504 573 aa17.48■□□□□ 0.39
TTC39A-216ENST00000530004 ADORA1P30542 326 aa17.47■□□□□ 0.39
TTC39A-216ENST00000530004 WASHC4Q2M389 1173 aa17.47■□□□□ 0.39
TTC39A-216ENST00000530004 DDRGK1Q96HY6 314 aa17.47■□□□□ 0.39
TTC39A-216ENST00000530004 LTBP3Q9NS15 1303 aa17.47■□□□□ 0.39
TTC39A-216ENST00000530004 ARHGAP27Q6ZUM4 889 aa17.46■□□□□ 0.39
TTC39A-216ENST00000530004 EVI5LQ96CN4 794 aa17.46■□□□□ 0.39
TTC39A-216ENST00000530004 FAM84BQ96KN1 310 aaPredicted RBP17.46■□□□□ 0.39
TTC39A-216ENST00000530004 ESYT1Q9BSJ8 1104 aa17.46■□□□□ 0.39
TTC39A-216ENST00000530004 ZC3H12CQ9C0D7 883 aaKnown RBP17.46■□□□□ 0.39
TTC39A-216ENST00000530004 RIMBP2O15034 1052 aa17.45■□□□□ 0.38
TTC39A-216ENST00000530004 GYG1P46976 350 aa17.45■□□□□ 0.38
TTC39A-216ENST00000530004 KIAA2012Q0VF49 1180 aa17.45■□□□□ 0.38
TTC39A-216ENST00000530004 ZNF277Q9NRM2 450 aaPredicted RBP17.45■□□□□ 0.38
TTC39A-216ENST00000530004 AK9Q5TCS8 1911 aa17.45■□□□□ 0.38
TTC39A-216ENST00000530004 RBM25P49756 843 aaKnown RBP17.45■□□□□ 0.38
TTC39A-216ENST00000530004 BCAMP50895 628 aa17.45■□□□□ 0.38
TTC39A-216ENST00000530004 RASSF7Q02833 373 aa17.45■□□□□ 0.38
TTC39A-216ENST00000530004 AOC3Q16853 763 aa17.45■□□□□ 0.38
TTC39A-216ENST00000530004 CAVIN4Q5BKX8 364 aa17.45■□□□□ 0.38
TTC39A-216ENST00000530004 VPS33BQ9H267 617 aa17.45■□□□□ 0.38
TTC39A-216ENST00000530004 FER1L6Q2WGJ9 1857 aa17.44■□□□□ 0.38
TTC39A-216ENST00000530004 PPIP5K2O43314 1243 aa17.44■□□□□ 0.38
TTC39A-216ENST00000530004 GRIN3BO60391 1043 aa17.44■□□□□ 0.38
TTC39A-216ENST00000530004 REC8O95072 547 aa17.44■□□□□ 0.38
TTC39A-216ENST00000530004 GORABQ5T7V8 394 aa17.44■□□□□ 0.38
TTC39A-216ENST00000530004 FBXO33Q7Z6M2 555 aa17.44■□□□□ 0.38
TTC39A-216ENST00000530004 HIBADHP31937 336 aaKnown RBP17.43■□□□□ 0.38
TTC39A-216ENST00000530004 IARSP41252 1262 aaKnown RBP17.43■□□□□ 0.38
TTC39A-216ENST00000530004 CCDC102BQ68D86 513 aa17.43■□□□□ 0.38
TTC39A-216ENST00000530004 HAUS7Q99871 368 aa17.43■□□□□ 0.38
TTC39A-216ENST00000530004 PHKA1P46020 1223 aa17.43■□□□□ 0.38
TTC39A-216ENST00000530004 PRELPP51888 382 aa17.43■□□□□ 0.38
TTC39A-216ENST00000530004 CCDC158Q5M9N0 1113 aa17.43■□□□□ 0.38
TTC39A-216ENST00000530004 ZNF804AQ7Z570 1209 aa17.43■□□□□ 0.38
TTC39A-216ENST00000530004 VPS37DQ86XT2 251 aa17.43■□□□□ 0.38
TTC39A-216ENST00000530004 DNAJC2Q99543 621 aaKnown RBP17.43■□□□□ 0.38
TTC39A-216ENST00000530004 USP26Q9BXU7 913 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms