RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 TTLL12Q14166 644 aaPredicted RBP20.71■□□□□ 0.91
COL16A1-216ENST00000529928 CCDC30Q5VVM6 783 aa20.71■□□□□ 0.91
COL16A1-216ENST00000529928 ZNF296Q8WUU4 475 aaPredicted RBP20.71■□□□□ 0.91
COL16A1-216ENST00000529928 SCAF8Q9UPN6 1271 aaKnown RBP20.71■□□□□ 0.91
COL16A1-216ENST00000529928 MAP3K2Q9Y2U5 619 aa20.71■□□□□ 0.91
COL16A1-216ENST00000529928 TM4SF4P48230 202 aa20.7■□□□□ 0.9
COL16A1-216ENST00000529928 MMP14P50281 582 aa20.7■□□□□ 0.9
COL16A1-216ENST00000529928 NOM1Q5C9Z4 860 aaKnown RBP20.7■□□□□ 0.9
COL16A1-216ENST00000529928 DACT2Q5SW24 774 aa20.7■□□□□ 0.9
COL16A1-216ENST00000529928 TTLL11Q8NHH1 800 aa20.7■□□□□ 0.9
COL16A1-216ENST00000529928 MINPP1Q9UNW1 487 aa20.7■□□□□ 0.9
COL16A1-216ENST00000529928 WTIPA6NIX2 430 aaPredicted RBP20.69■□□□□ 0.9
COL16A1-216ENST00000529928 WNT10BO00744 389 aa20.69■□□□□ 0.9
COL16A1-216ENST00000529928 TBC1D8O95759 1140 aa20.69■□□□□ 0.9
COL16A1-216ENST00000529928 CCT4P50991 539 aaKnown RBP20.69■□□□□ 0.9
COL16A1-216ENST00000529928 STRIP1Q5VSL9 837 aa20.69■□□□□ 0.9
COL16A1-216ENST00000529928 PRPF38BQ5VTL8 546 aaKnown RBP20.69■□□□□ 0.9
COL16A1-216ENST00000529928 PRAMEF18Q5VWM3 479 aa20.69■□□□□ 0.9
COL16A1-216ENST00000529928 C8orf58Q8NAV2 365 aa20.69■□□□□ 0.9
COL16A1-216ENST00000529928 COA1Q9GZY4 146 aa20.69■□□□□ 0.9
COL16A1-216ENST00000529928 APAF1O14727 1248 aa20.68■□□□□ 0.9
COL16A1-216ENST00000529928 SREBF2Q12772 1141 aa20.68■□□□□ 0.9
COL16A1-216ENST00000529928 FBXW7Q969H0 707 aa20.68■□□□□ 0.9
COL16A1-216ENST00000529928 GREM2Q9H772 168 aa20.68■□□□□ 0.9
COL16A1-216ENST00000529928 NEXNQ0ZGT2 675 aa20.67■□□□□ 0.9
COL16A1-216ENST00000529928 KSR2Q6VAB6 950 aa20.67■□□□□ 0.9
COL16A1-216ENST00000529928 MXD3Q9BW11 206 aa20.67■□□□□ 0.9
COL16A1-216ENST00000529928 MYH3P11055 1940 aa20.66■□□□□ 0.9
COL16A1-216ENST00000529928 PI4KAP2A4QPH2 592 aa20.66■□□□□ 0.9
COL16A1-216ENST00000529928 GPR25O00155 361 aa20.66■□□□□ 0.9
COL16A1-216ENST00000529928 IGKV5-2P06315 115 aa20.66■□□□□ 0.9
COL16A1-216ENST00000529928 ARMC9Q7Z3E5 817 aa20.66■□□□□ 0.9
COL16A1-216ENST00000529928 APOBEC3FQ8IUX4 373 aaKnown RBP20.66■□□□□ 0.9
COL16A1-216ENST00000529928 PI4KAP1Q8N8J0 262 aa20.66■□□□□ 0.9
COL16A1-216ENST00000529928 LEMD3Q9Y2U8 911 aa20.66■□□□□ 0.9
COL16A1-216ENST00000529928 ZNF646O15015 1829 aaPredicted RBP20.66■□□□□ 0.9
COL16A1-216ENST00000529928 SPEF2Q9C093 1822 aa20.65■□□□□ 0.9
COL16A1-216ENST00000529928 CFHR5Q9BXR6 569 aa20.65■□□□□ 0.9
COL16A1-216ENST00000529928 SASH1O94885 1247 aa20.64■□□□□ 0.89
COL16A1-216ENST00000529928 IGHMBP2P38935 993 aaKnown RBP20.64■□□□□ 0.89
COL16A1-216ENST00000529928 MKRN3Q13064 507 aaKnown RBP20.64■□□□□ 0.89
COL16A1-216ENST00000529928 FBXO46Q6PJ61 603 aaPredicted RBP20.64■□□□□ 0.89
COL16A1-216ENST00000529928 PTPN12Q05209 780 aaKnown RBP20.63■□□□□ 0.89
COL16A1-216ENST00000529928 TTLL5Q6EMB2 1281 aa20.63■□□□□ 0.89
COL16A1-216ENST00000529928 TXNRD3Q86VQ6 643 aa20.63■□□□□ 0.89
COL16A1-216ENST00000529928 STK31Q9BXU1 1019 aa20.63■□□□□ 0.89
COL16A1-216ENST00000529928 ZNF804BA4D1E1 1349 aa20.62■□□□□ 0.89
COL16A1-216ENST00000529928 NEURL1BA8MQ27 555 aa20.62■□□□□ 0.89
COL16A1-216ENST00000529928 FKTNO75072 461 aa20.62■□□□□ 0.89
COL16A1-216ENST00000529928 CWF19L2Q2TBE0 894 aaKnown RBP20.62■□□□□ 0.89
COL16A1-216ENST00000529928 UBE3BQ7Z3V4 1068 aa20.62■□□□□ 0.89
COL16A1-216ENST00000529928 KIAA0825Q8IV33 1275 aa20.62■□□□□ 0.89
COL16A1-216ENST00000529928 TSPYL6Q8N831 410 aa20.62■□□□□ 0.89
COL16A1-216ENST00000529928 ANKRD2Q9GZV1 360 aa20.62■□□□□ 0.89
COL16A1-216ENST00000529928 ALDH1A1P00352 501 aa20.61■□□□□ 0.89
COL16A1-216ENST00000529928 LDLRAD1Q5T700 205 aa20.61■□□□□ 0.89
COL16A1-216ENST00000529928 PRKRIP1Q9H875 184 aaPredicted RBP20.61■□□□□ 0.89
COL16A1-216ENST00000529928 COL1A1P02452 1464 aaPredicted RBP20.61■□□□□ 0.89
COL16A1-216ENST00000529928 H7C1W4 665 aa20.6■□□□□ 0.89
COL16A1-216ENST00000529928 PRKG1Q13976 671 aa20.6■□□□□ 0.89
COL16A1-216ENST00000529928 SPRYD7Q5W111 196 aa20.6■□□□□ 0.89
COL16A1-216ENST00000529928 ZBED3Q96IU2 234 aaPredicted RBP20.6■□□□□ 0.89
COL16A1-216ENST00000529928 MPHOSPH8Q99549 860 aa20.6■□□□□ 0.89
COL16A1-216ENST00000529928 ITGA6P23229 1130 aa20.59■□□□□ 0.89
COL16A1-216ENST00000529928 GTF2IP78347 998 aa20.59■□□□□ 0.89
COL16A1-216ENST00000529928 PLA2G12BQ9BX93 195 aa20.59■□□□□ 0.89
COL16A1-216ENST00000529928 ANGEL1Q9UNK9 670 aaKnown RBP20.59■□□□□ 0.89
COL16A1-216ENST00000529928 KLRK1P26718 216 aa20.58■□□□□ 0.89
COL16A1-216ENST00000529928 KCNJ4P48050 445 aa20.58■□□□□ 0.89
COL16A1-216ENST00000529928 INHBEP58166 350 aa20.58■□□□□ 0.89
COL16A1-216ENST00000529928 MANSC4A6NHS7 340 aaPredicted RBP20.57■□□□□ 0.88
COL16A1-216ENST00000529928 GCKRQ14397 625 aa20.57■□□□□ 0.88
COL16A1-216ENST00000529928 DLGAP5Q15398 846 aa20.57■□□□□ 0.88
COL16A1-216ENST00000529928 DEFB129Q9H1M3 183 aa20.57■□□□□ 0.88
COL16A1-216ENST00000529928 R3HDMLQ9H3Y0 253 aa20.57■□□□□ 0.88
COL16A1-216ENST00000529928 ZBTB48P10074 688 aaPredicted RBP20.56■□□□□ 0.88
COL16A1-216ENST00000529928 MAP3K11Q16584 847 aa20.56■□□□□ 0.88
COL16A1-216ENST00000529928 TSR2Q969E8 191 aaKnown RBP20.56■□□□□ 0.88
COL16A1-216ENST00000529928 SLC10A4Q96EP9 437 aa20.56■□□□□ 0.88
COL16A1-216ENST00000529928 CD209Q9NNX6 404 aa20.56■□□□□ 0.88
COL16A1-216ENST00000529928 PPP2R3BQ9Y5P8 575 aa20.56■□□□□ 0.88
COL16A1-216ENST00000529928 PPP1R12BO60237 982 aaPredicted RBP20.55■□□□□ 0.88
COL16A1-216ENST00000529928 CSF1RP07333 972 aa20.55■□□□□ 0.88
COL16A1-216ENST00000529928 CHRNDQ07001 517 aa20.55■□□□□ 0.88
COL16A1-216ENST00000529928 TWISTNBQ3B726 338 aaPredicted RBP20.55■□□□□ 0.88
COL16A1-216ENST00000529928 IFNL1Q8IU54 200 aa20.55■□□□□ 0.88
COL16A1-216ENST00000529928 MTMR14Q8NCE2 650 aa20.55■□□□□ 0.88
COL16A1-216ENST00000529928 MYH16Q9H6N6 1097 aa20.55■□□□□ 0.88
COL16A1-216ENST00000529928 UNCXA6NJT0 531 aa20.54■□□□□ 0.88
COL16A1-216ENST00000529928 SLC4A2P04920 1241 aa20.54■□□□□ 0.88
COL16A1-216ENST00000529928 G2E3Q7L622 706 aa20.54■□□□□ 0.88
COL16A1-216ENST00000529928 FZD1Q9UP38 647 aa20.54■□□□□ 0.88
COL16A1-216ENST00000529928 MYO1BO43795 1136 aa20.53■□□□□ 0.88
COL16A1-216ENST00000529928 CASP7P55210 303 aa20.53■□□□□ 0.88
COL16A1-216ENST00000529928 GCC1Q96CN9 775 aa20.53■□□□□ 0.88
COL16A1-216ENST00000529928 TRIM17Q9Y577 477 aa20.53■□□□□ 0.88
COL16A1-216ENST00000529928 ANKRD18BA2A2Z9 1011 aa20.52■□□□□ 0.88
COL16A1-216ENST00000529928 FLIIQ13045 1269 aa20.52■□□□□ 0.88
COL16A1-216ENST00000529928 INTS3Q68E01 1043 aaKnown RBP20.52■□□□□ 0.88
COL16A1-216ENST00000529928 C15orf52Q6ZUT6 534 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms