RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 EYA2O00167 538 aa15.82■□□□□ 0.12
CCDC90B-216ENST00000529856 VIL1P09327 827 aaKnown RBP15.82■□□□□ 0.12
CCDC90B-216ENST00000529856 LMOD1P29536 600 aaPredicted RBP15.82■□□□□ 0.12
CCDC90B-216ENST00000529856 EPHX2P34913 555 aa15.82■□□□□ 0.12
CCDC90B-216ENST00000529856 EPS15P42566 896 aa15.82■□□□□ 0.12
CCDC90B-216ENST00000529856 GMPSP49915 693 aaPredicted RBP15.82■□□□□ 0.12
CCDC90B-216ENST00000529856 MTX1Q13505 466 aa15.82■□□□□ 0.12
CCDC90B-216ENST00000529856 UBE4AQ14139 1066 aa15.82■□□□□ 0.12
CCDC90B-216ENST00000529856 GPRC5DQ9NZD1 345 aa15.82■□□□□ 0.12
CCDC90B-216ENST00000529856 FBXO3Q9UK99 471 aa15.82■□□□□ 0.12
CCDC90B-216ENST00000529856 SCN9AQ15858 1988 aa15.82■□□□□ 0.12
CCDC90B-216ENST00000529856 FSTL1Q12841 308 aa15.81■□□□□ 0.12
CCDC90B-216ENST00000529856 METTL24Q5JXM2 366 aa15.81■□□□□ 0.12
CCDC90B-216ENST00000529856 PNMA8AQ86V59 439 aaPredicted RBP15.81■□□□□ 0.12
CCDC90B-216ENST00000529856 VGLL2Q8N8G2 317 aa15.81■□□□□ 0.12
CCDC90B-216ENST00000529856 SRGAP3O43295 1099 aa15.8■□□□□ 0.12
CCDC90B-216ENST00000529856 CIAO1O76071 339 aa15.8■□□□□ 0.12
CCDC90B-216ENST00000529856 PDE8BO95263 885 aa15.8■□□□□ 0.12
CCDC90B-216ENST00000529856 ATG9AQ7Z3C6 839 aa15.8■□□□□ 0.12
CCDC90B-216ENST00000529856 SMC1BQ8NDV3 1235 aa15.8■□□□□ 0.12
CCDC90B-216ENST00000529856 DPF2Q92785 391 aa15.8■□□□□ 0.12
CCDC90B-216ENST00000529856 COPRSQ9NQ92 184 aa15.8■□□□□ 0.12
CCDC90B-216ENST00000529856 ZBTB12Q9Y330 459 aaPredicted RBP15.8■□□□□ 0.12
CCDC90B-216ENST00000529856 USP17L3A6NCW0 530 aa15.79■□□□□ 0.12
CCDC90B-216ENST00000529856 USP17L4A6NCW7 530 aa15.79■□□□□ 0.12
CCDC90B-216ENST00000529856 POTEIP0CG38 1075 aa15.79■□□□□ 0.12
CCDC90B-216ENST00000529856 POTEJP0CG39 1038 aa15.79■□□□□ 0.12
CCDC90B-216ENST00000529856 RPS12P25398 132 aaKnown RBP15.79■□□□□ 0.12
CCDC90B-216ENST00000529856 USP17L1Q7RTZ2 530 aa15.79■□□□□ 0.12
CCDC90B-216ENST00000529856 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.79■□□□□ 0.12
CCDC90B-216ENST00000529856 CD209Q9NNX6 404 aa15.79■□□□□ 0.12
CCDC90B-216ENST00000529856 CNOT7Q9UIV1 285 aaKnown RBP15.79■□□□□ 0.12
CCDC90B-216ENST00000529856 PA2G4Q9UQ80 394 aaKnown RBP15.79■□□□□ 0.12
CCDC90B-216ENST00000529856 PSME4Q14997 1843 aa15.78■□□□□ 0.12
CCDC90B-216ENST00000529856 ATP8B2P98198 1209 aa15.78■□□□□ 0.12
CCDC90B-216ENST00000529856 MVPQ14764 893 aaKnown RBP15.78■□□□□ 0.12
CCDC90B-216ENST00000529856 EAPPQ56P03 285 aaPredicted RBP15.78■□□□□ 0.12
CCDC90B-216ENST00000529856 CHADLQ6NUI6 762 aa15.78■□□□□ 0.12
CCDC90B-216ENST00000529856 RSBN1LQ6PCB5 846 aaPredicted RBP15.78■□□□□ 0.12
CCDC90B-216ENST00000529856 USP50Q70EL3 339 aaPredicted RBP15.78■□□□□ 0.12
CCDC90B-216ENST00000529856 LDHDQ86WU2 507 aa15.78■□□□□ 0.12
CCDC90B-216ENST00000529856 SIL1Q9H173 461 aa15.78■□□□□ 0.12
CCDC90B-216ENST00000529856 RNF39Q9H2S5 420 aa15.78■□□□□ 0.12
CCDC90B-216ENST00000529856 ADARB2Q9NS39 739 aaKnown RBP15.78■□□□□ 0.12
CCDC90B-216ENST00000529856 PNMA6EA0A0J9YXQ4 647 aa15.77■□□□□ 0.12
CCDC90B-216ENST00000529856 H7C1D1 291 aa15.77■□□□□ 0.12
CCDC90B-216ENST00000529856 IL1R1P14778 569 aa15.77■□□□□ 0.12
CCDC90B-216ENST00000529856 FGFR2P21802 821 aa15.77■□□□□ 0.12
CCDC90B-216ENST00000529856 IL15P40933 162 aaPredicted RBP15.77■□□□□ 0.12
CCDC90B-216ENST00000529856 PDE3AQ14432 1141 aa15.77■□□□□ 0.12
CCDC90B-216ENST00000529856 STRIP1Q5VSL9 837 aa15.77■□□□□ 0.12
CCDC90B-216ENST00000529856 ZNF804AQ7Z570 1209 aa15.77■□□□□ 0.12
CCDC90B-216ENST00000529856 MICALL2Q8IY33 904 aa15.77■□□□□ 0.12
CCDC90B-216ENST00000529856 AGBL3Q8NEM8 1001 aa15.77■□□□□ 0.12
CCDC90B-216ENST00000529856 GMLQ99445 158 aa15.77■□□□□ 0.12
CCDC90B-216ENST00000529856 C1orf115Q9H7X2 142 aa15.77■□□□□ 0.12
CCDC90B-216ENST00000529856 COG6Q9Y2V7 657 aa15.77■□□□□ 0.12
CCDC90B-216ENST00000529856 SHTN1A0MZ66 631 aa15.76■□□□□ 0.11
CCDC90B-216ENST00000529856 PUM3Q15397 648 aaKnown RBP15.76■□□□□ 0.11
CCDC90B-216ENST00000529856 DACT2Q5SW24 774 aa15.76■□□□□ 0.11
CCDC90B-216ENST00000529856 TTLL5Q6EMB2 1281 aa15.76■□□□□ 0.11
CCDC90B-216ENST00000529856 FAM84BQ96KN1 310 aaPredicted RBP15.76■□□□□ 0.11
CCDC90B-216ENST00000529856 CEP126Q9P2H0 1117 aa15.76■□□□□ 0.11
CCDC90B-216ENST00000529856 CLEC11AQ9Y240 323 aa15.76■□□□□ 0.11
CCDC90B-216ENST00000529856 ZNF609O15014 1411 aa15.76■□□□□ 0.11
CCDC90B-216ENST00000529856 ADAMTSL1Q8N6G6 1762 aa15.75■□□□□ 0.11
CCDC90B-216ENST00000529856 HSPA6P17066 643 aa15.75■□□□□ 0.11
CCDC90B-216ENST00000529856 HIBADHP31937 336 aaKnown RBP15.75■□□□□ 0.11
CCDC90B-216ENST00000529856 GYG1P46976 350 aa15.75■□□□□ 0.11
CCDC90B-216ENST00000529856 GTF2IP78347 998 aa15.75■□□□□ 0.11
CCDC90B-216ENST00000529856 POLA2Q14181 598 aa15.75■□□□□ 0.11
CCDC90B-216ENST00000529856 C20orf194Q5TEA3 1177 aa15.75■□□□□ 0.11
CCDC90B-216ENST00000529856 FBXO33Q7Z6M2 555 aa15.75■□□□□ 0.11
CCDC90B-216ENST00000529856 SSH3Q8TE77 659 aa15.75■□□□□ 0.11
CCDC90B-216ENST00000529856 DDX19BQ9UMR2 479 aa15.75■□□□□ 0.11
CCDC90B-216ENST00000529856 IFIT1P09914 478 aaKnown RBP15.74■□□□□ 0.11
CCDC90B-216ENST00000529856 HIRAP54198 1017 aaPredicted RBP15.74■□□□□ 0.11
CCDC90B-216ENST00000529856 TDRD7Q8NHU6 1098 aaKnown RBP15.74■□□□□ 0.11
CCDC90B-216ENST00000529856 LPIN2Q92539 896 aa15.74■□□□□ 0.11
CCDC90B-216ENST00000529856 FBXW7Q969H0 707 aa15.74■□□□□ 0.11
CCDC90B-216ENST00000529856 MXD3Q9BW11 206 aa15.74■□□□□ 0.11
CCDC90B-216ENST00000529856 ZNF646O15015 1829 aaPredicted RBP15.73■□□□□ 0.11
CCDC90B-216ENST00000529856 MYO3BQ8WXR4 1341 aa15.73■□□□□ 0.11
CCDC90B-216ENST00000529856 SASH1O94885 1247 aa15.73■□□□□ 0.11
CCDC90B-216ENST00000529856 SLC5A1P13866 664 aa15.73■□□□□ 0.11
CCDC90B-216ENST00000529856 ZNF280AP59817 542 aaPredicted RBP15.73■□□□□ 0.11
CCDC90B-216ENST00000529856 CAVIN4Q5BKX8 364 aa15.73■□□□□ 0.11
CCDC90B-216ENST00000529856 SAMD7Q7Z3H4 446 aa15.73■□□□□ 0.11
CCDC90B-216ENST00000529856 TRPM4Q8TD43 1214 aa15.73■□□□□ 0.11
CCDC90B-216ENST00000529856 CHMP4BQ9H444 224 aaKnown RBP15.73■□□□□ 0.11
CCDC90B-216ENST00000529856 ZBTB40Q9NUA8 1239 aa15.73■□□□□ 0.11
CCDC90B-216ENST00000529856 PGAP2Q9UHJ9 254 aa15.73■□□□□ 0.11
CCDC90B-216ENST00000529856 ITGBL1O95965 494 aaPredicted RBP15.72■□□□□ 0.11
CCDC90B-216ENST00000529856 EGFRP00533 1210 aa15.72■□□□□ 0.11
CCDC90B-216ENST00000529856 USP17L8P0C7I0 530 aa15.72■□□□□ 0.11
CCDC90B-216ENST00000529856 BCAMP50895 628 aa15.72■□□□□ 0.11
CCDC90B-216ENST00000529856 G3BP1Q13283 466 aaKnown RBP eCLIP15.72■□□□□ 0.11
CCDC90B-216ENST00000529856 ATP2B3Q16720 1220 aa15.72■□□□□ 0.11
CCDC90B-216ENST00000529856 MAP1SQ66K74 1059 aaPredicted RBP15.72■□□□□ 0.11
CCDC90B-216ENST00000529856 CEP85Q6P2H3 762 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms