RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 C7P10643 843 aa11.7□□□□□ -0.54
VPS11-203ENST00000529545 TMPOP42166 694 aaKnown RBP11.7□□□□□ -0.54
VPS11-203ENST00000529545 SCARF1Q14162 830 aa11.7□□□□□ -0.54
VPS11-203ENST00000529545 RTL5Q5HYW3 569 aaPredicted RBP11.7□□□□□ -0.54
VPS11-203ENST00000529545 HDGFL1Q5TGJ6 251 aa11.7□□□□□ -0.54
VPS11-203ENST00000529545 RASAL3Q86YV0 1011 aa11.7□□□□□ -0.54
VPS11-203ENST00000529545 AGBL3Q8NEM8 1001 aa11.7□□□□□ -0.54
VPS11-203ENST00000529545 GGA1Q9UJY5 639 aa11.7□□□□□ -0.54
VPS11-203ENST00000529545 LAS1LQ9Y4W2 734 aaKnown RBP11.7□□□□□ -0.54
VPS11-203ENST00000529545 ZNF280AP59817 542 aaPredicted RBP11.69□□□□□ -0.54
VPS11-203ENST00000529545 NEUROD2Q15784 382 aa11.69□□□□□ -0.54
VPS11-203ENST00000529545 RSBN1LQ6PCB5 846 aaPredicted RBP11.69□□□□□ -0.54
VPS11-203ENST00000529545 HYPKQ9NX55 129 aa11.69□□□□□ -0.54
VPS11-203ENST00000529545 PODXL2Q9NZ53 605 aa11.69□□□□□ -0.54
VPS11-203ENST00000529545 HPS5Q9UPZ3 1129 aa11.69□□□□□ -0.54
VPS11-203ENST00000529545 ASTN2O75129 1339 aaPredicted RBP11.68□□□□□ -0.54
VPS11-203ENST00000529545 PITPNM2Q9BZ72 1349 aa11.68□□□□□ -0.54
VPS11-203ENST00000529545 CHL1O00533 1208 aa11.68□□□□□ -0.54
VPS11-203ENST00000529545 HOXB7P09629 217 aa11.68□□□□□ -0.54
VPS11-203ENST00000529545 USP17L8P0C7I0 530 aa11.68□□□□□ -0.54
VPS11-203ENST00000529545 CHRM1P11229 460 aaPredicted RBP11.68□□□□□ -0.54
VPS11-203ENST00000529545 ATN1P54259 1190 aaPredicted RBP11.68□□□□□ -0.54
VPS11-203ENST00000529545 TRIM28Q13263 835 aaKnown RBP11.68□□□□□ -0.54
VPS11-203ENST00000529545 TTLL12Q14166 644 aaPredicted RBP11.68□□□□□ -0.54
VPS11-203ENST00000529545 TRPC6Q9Y210 931 aa11.68□□□□□ -0.54
VPS11-203ENST00000529545 PAPPA2Q9BXP8 1791 aa11.68□□□□□ -0.54
VPS11-203ENST00000529545 SCN9AQ15858 1988 aa11.67□□□□□ -0.54
VPS11-203ENST00000529545 TTLL13PA6NNM8 815 aa11.67□□□□□ -0.54
VPS11-203ENST00000529545 NF2P35240 595 aa11.67□□□□□ -0.54
VPS11-203ENST00000529545 KRT24Q2M2I5 525 aa11.67□□□□□ -0.54
VPS11-203ENST00000529545 CCDC152Q4G0S7 254 aa11.67□□□□□ -0.54
VPS11-203ENST00000529545 RIC3Q7Z5B4 369 aa11.67□□□□□ -0.54
VPS11-203ENST00000529545 MYOZ2Q9NPC6 264 aa11.67□□□□□ -0.54
VPS11-203ENST00000529545 METRNQ9UJH8 293 aa11.67□□□□□ -0.54
VPS11-203ENST00000529545 USP17L3A6NCW0 530 aa11.66□□□□□ -0.54
VPS11-203ENST00000529545 USP17L4A6NCW7 530 aa11.66□□□□□ -0.54
VPS11-203ENST00000529545 UBE2Q2LH0YL09 131 aa11.66□□□□□ -0.54
VPS11-203ENST00000529545 TBC1D8O95759 1140 aa11.66□□□□□ -0.54
VPS11-203ENST00000529545 GOLGA2Q08379 1002 aa11.66□□□□□ -0.54
VPS11-203ENST00000529545 USP17L1Q7RTZ2 530 aa11.66□□□□□ -0.54
VPS11-203ENST00000529545 PODNQ7Z5L7 613 aa11.66□□□□□ -0.54
VPS11-203ENST00000529545 ZNF467Q7Z7K2 595 aaPredicted RBP11.66□□□□□ -0.54
VPS11-203ENST00000529545 ZBTB38Q8NAP3 1195 aaPredicted RBP11.66□□□□□ -0.54
VPS11-203ENST00000529545 ZNF296Q8WUU4 475 aaPredicted RBP11.66□□□□□ -0.54
VPS11-203ENST00000529545 GCC1Q96CN9 775 aa11.66□□□□□ -0.54
VPS11-203ENST00000529545 SEC31BQ9NQW1 1179 aa11.66□□□□□ -0.54
VPS11-203ENST00000529545 ZNF609O15014 1411 aa11.66□□□□□ -0.54
VPS11-203ENST00000529545 XDHP47989 1333 aa11.65□□□□□ -0.54
VPS11-203ENST00000529545 ATP2B4P23634 1241 aa11.65□□□□□ -0.54
VPS11-203ENST00000529545 SREBF2Q12772 1141 aa11.65□□□□□ -0.54
VPS11-203ENST00000529545 ANKRD18AQ8IVF6 992 aa11.65□□□□□ -0.54
VPS11-203ENST00000529545 OGFOD1Q8N543 542 aa11.65□□□□□ -0.54
VPS11-203ENST00000529545 CIZ1Q9ULV3 898 aaPredicted RBP11.65□□□□□ -0.54
VPS11-203ENST00000529545 PSME4Q14997 1843 aa11.65□□□□□ -0.55
VPS11-203ENST00000529545 GPR25O00155 361 aa11.64□□□□□ -0.55
VPS11-203ENST00000529545 PDE8AO60658 829 aa11.64□□□□□ -0.55
VPS11-203ENST00000529545 TM4SF4P48230 202 aa11.64□□□□□ -0.55
VPS11-203ENST00000529545 RALBP1Q15311 655 aa11.64□□□□□ -0.55
VPS11-203ENST00000529545 NOM1Q5C9Z4 860 aaKnown RBP11.64□□□□□ -0.55
VPS11-203ENST00000529545 DUSP27Q5VZP5 1158 aa11.64□□□□□ -0.55
VPS11-203ENST00000529545 FBXO46Q6PJ61 603 aaPredicted RBP11.64□□□□□ -0.55
VPS11-203ENST00000529545 MOB2Q70IA6 237 aa11.64□□□□□ -0.55
VPS11-203ENST00000529545 GMLQ99445 158 aa11.64□□□□□ -0.55
VPS11-203ENST00000529545 COL4A1P02462 1669 aa11.63□□□□□ -0.55
VPS11-203ENST00000529545 FKTNO75072 461 aa11.63□□□□□ -0.55
VPS11-203ENST00000529545 PCCAP05165 728 aaPredicted RBP11.63□□□□□ -0.55
VPS11-203ENST00000529545 ARMC9Q7Z3E5 817 aa11.63□□□□□ -0.55
VPS11-203ENST00000529545 CCDC146Q8IYE0 955 aa11.63□□□□□ -0.55
VPS11-203ENST00000529545 CCDC191Q8NCU4 936 aa11.63□□□□□ -0.55
VPS11-203ENST00000529545 FBXW7Q969H0 707 aa11.63□□□□□ -0.55
VPS11-203ENST00000529545 RUNDC1Q96C34 613 aa11.63□□□□□ -0.55
VPS11-203ENST00000529545 CCDC85AQ96PX6 553 aaPredicted RBP11.63□□□□□ -0.55
VPS11-203ENST00000529545 CDC5LQ99459 802 aaKnown RBP11.63□□□□□ -0.55
VPS11-203ENST00000529545 MYD88Q99836 296 aa11.63□□□□□ -0.55
VPS11-203ENST00000529545 CWC25Q9NXE8 425 aaPredicted RBP11.63□□□□□ -0.55
VPS11-203ENST00000529545 MYO3BQ8WXR4 1341 aa11.62□□□□□ -0.55
VPS11-203ENST00000529545 ALDH1A1P00352 501 aa11.62□□□□□ -0.55
VPS11-203ENST00000529545 MMP14P50281 582 aa11.62□□□□□ -0.55
VPS11-203ENST00000529545 MKRN3Q13064 507 aaKnown RBP11.62□□□□□ -0.55
VPS11-203ENST00000529545 WDR43Q15061 677 aaKnown RBP eCLIP11.62□□□□□ -0.55
VPS11-203ENST00000529545 NBPF9Q3BBW0 867 aa11.62□□□□□ -0.55
VPS11-203ENST00000529545 PRAMEF18Q5VWM3 479 aa11.62□□□□□ -0.55
VPS11-203ENST00000529545 CHMP4AQ9BY43 222 aa11.62□□□□□ -0.55
VPS11-203ENST00000529545 SCAF8Q9UPN6 1271 aaKnown RBP11.62□□□□□ -0.55
VPS11-203ENST00000529545 DDX58O95786 925 aaKnown RBP11.61□□□□□ -0.55
VPS11-203ENST00000529545 TMEM106CQ9BVX2 250 aa11.61□□□□□ -0.55
VPS11-203ENST00000529545 TRIM35Q9UPQ4 493 aa11.61□□□□□ -0.55
VPS11-203ENST00000529545 MED23Q9ULK4 1368 aa11.6□□□□□ -0.55
VPS11-203ENST00000529545 WNT10BO00744 389 aa11.6□□□□□ -0.55
VPS11-203ENST00000529545 PTPN12Q05209 780 aaKnown RBP11.6□□□□□ -0.55
VPS11-203ENST00000529545 IER5LQ5T953 404 aa11.6□□□□□ -0.55
VPS11-203ENST00000529545 APOBEC3FQ8IUX4 373 aaKnown RBP11.6□□□□□ -0.55
VPS11-203ENST00000529545 CFHR5Q9BXR6 569 aa11.6□□□□□ -0.55
VPS11-203ENST00000529545 INHBEP58166 350 aa11.59□□□□□ -0.55
VPS11-203ENST00000529545 PRKG1Q13976 671 aa11.59□□□□□ -0.55
VPS11-203ENST00000529545 DACT2Q5SW24 774 aa11.59□□□□□ -0.55
VPS11-203ENST00000529545 STRIP1Q5VSL9 837 aa11.59□□□□□ -0.55
VPS11-203ENST00000529545 INTS3Q68E01 1043 aaKnown RBP11.59□□□□□ -0.55
VPS11-203ENST00000529545 JARID2Q92833 1246 aaPredicted RBP11.59□□□□□ -0.55
VPS11-203ENST00000529545 METTL22Q9BUU2 404 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms