RNA–Protein interactions for RNA: ENST00000528216.5

PGAP2-231, Transcript of post-GPI attachment to proteins 2, human

TSL 1 (best)

Gene PGAP2, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-231	ENST00000528216	PANK2	Q9BZ23	570 aa		12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	RIPOR2	Q9Y4F9	1068 aa		12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	KAT6B	Q8WYB5	2073 aa		12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	MYH7	P12883	1935 aa		12.11	□□□□□ -0.47
PGAP2-231	ENST00000528216	RTL9	Q8NET4	1388 aa		12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	WDR19	Q8NEZ3	1342 aa		12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	LARGE1	O95461	756 aa		12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	UQCRFS1P1	P0C7P4	283 aa		12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	CPA1	P15085	419 aa		12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	HMGN5	P82970	282 aa	Known RBP	12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	EN1	Q05925	392 aa	Predicted RBP	12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	TOB2	Q14106	344 aa	Predicted RBP	12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	CCDC183	Q5T5S1	534 aa		12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	ZNF34	Q8IZ26	560 aa		12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	TTLL11	Q8NHH1	800 aa		12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	GTF3C6	Q969F1	213 aa		12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	EDC3	Q96F86	508 aa	Known RBP	12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	XAGE2	Q96GT9	111 aa		12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	TMEM63C	Q9P1W3	806 aa		12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	ARAP2	Q8WZ64	1704 aa		12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	RIC1	Q4ADV7	1423 aa		12.1	□□□□□ -0.47
PGAP2-231	ENST00000528216	MROH5	Q6ZUA9	1318 aa		12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	CYP21A2	P08686	494 aa		12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	KRT85	P78386	507 aa		12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	ATP2B3	Q16720	1220 aa		12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	DZIP3	Q86Y13	1208 aa	Known RBP	12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	APPBP2	Q92624	585 aa		12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	FAM89A	Q96GI7	184 aa		12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	SCAND2P	Q9GZW5	306 aa	Predicted RBP	12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	LAMB2	P55268	1798 aa		12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	IRS4	O14654	1257 aa	Predicted RBP	12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	EIF5	P55010	431 aa	Known RBP	12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	UVSSA	Q2YD98	709 aa		12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	METTL24	Q5JXM2	366 aa		12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	ATL3	Q6DD88	541 aa		12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	LDHAL6A	Q6ZMR3	332 aa		12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	ZNF594	Q96JF6	807 aa	Predicted RBP	12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	TSPY26P	Q9H489	355 aa		12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	CCDC87	Q9NVE4	849 aa		12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	TRMT112	Q9UI30	125 aa	Known RBP	12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.09	□□□□□ -0.47
PGAP2-231	ENST00000528216	MAST3	O60307	1309 aa		12.08	□□□□□ -0.48
PGAP2-231	ENST00000528216	PFKFB2	O60825	505 aa		12.08	□□□□□ -0.48
PGAP2-231	ENST00000528216	HSPD1	P10809	573 aa	Known RBP	12.08	□□□□□ -0.48
PGAP2-231	ENST00000528216	ITGA6	P23229	1130 aa		12.08	□□□□□ -0.48
PGAP2-231	ENST00000528216	ST3GAL1	Q11201	340 aa		12.08	□□□□□ -0.48
PGAP2-231	ENST00000528216	ZNF274	Q96GC6	653 aa	Predicted RBP	12.08	□□□□□ -0.48
PGAP2-231	ENST00000528216	PUS3	Q9BZE2	481 aa	Known RBP	12.08	□□□□□ -0.48
PGAP2-231	ENST00000528216	ZBTB1	Q9Y2K1	713 aa		12.08	□□□□□ -0.48
PGAP2-231	ENST00000528216	LAMA4	Q16363	1823 aa		12.08	□□□□□ -0.48
PGAP2-231	ENST00000528216	FGD1	P98174	961 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	EZH2	Q15910	746 aa	Known RBP	12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	IMMT	Q16891	758 aa	Known RBP	12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	SLC4A9	Q96Q91	983 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	ARX	Q96QS3	562 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	CNNM1	Q9NRU3	951 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	TCHH	Q07283	1943 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	VPS37C	A5D8V6	355 aa	Predicted RBP	12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	PLSCR1	O15162	318 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	PDE8B	O95263	885 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	CLCN1	P35523	988 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	EVC	P57679	992 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	EXOSC10	Q01780	885 aa	Known RBP	12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	HLF	Q16534	295 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	NAA16	Q6N069	864 aa	Predicted RBP	12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216		Q6ZUG5	572 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	VGLL2	Q8N8G2	317 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	NECAB1	Q8N987	351 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	SMARCC2	Q8TAQ2	1214 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	LPIN2	Q92539	896 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	PDLIM2	Q96JY6	352 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	CNPY2	Q9Y2B0	182 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	ZNF652	Q9Y2D9	606 aa		12.07	□□□□□ -0.48
PGAP2-231	ENST00000528216	SYCE3	A1L190	88 aa		12.06	□□□□□ -0.48
PGAP2-231	ENST00000528216	UBE3C	Q15386	1083 aa		12.06	□□□□□ -0.48
PGAP2-231	ENST00000528216	PUM3	Q15397	648 aa	Known RBP	12.06	□□□□□ -0.48
PGAP2-231	ENST00000528216	CCDC129	Q6ZRS4	1044 aa		12.06	□□□□□ -0.48
PGAP2-231	ENST00000528216	CAMKK2	Q96RR4	588 aa		12.06	□□□□□ -0.48
PGAP2-231	ENST00000528216	SEC62	Q99442	399 aa	Known RBP	12.06	□□□□□ -0.48
PGAP2-231	ENST00000528216	RBM27	Q9P2N5	1060 aa	Known RBP	12.06	□□□□□ -0.48
PGAP2-231	ENST00000528216	ZMYM6	O95789	1325 aa		12.05	□□□□□ -0.48
PGAP2-231	ENST00000528216		E7EWF7	191 aa		12.05	□□□□□ -0.48
PGAP2-231	ENST00000528216	DHX16	O60231	1041 aa	Known RBP	12.05	□□□□□ -0.48
PGAP2-231	ENST00000528216	ARID4A	P29374	1257 aa	Predicted RBP	12.05	□□□□□ -0.48
PGAP2-231	ENST00000528216	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.05	□□□□□ -0.48
PGAP2-231	ENST00000528216	UTP14A	Q9BVJ6	771 aa	Known RBP	12.05	□□□□□ -0.48
PGAP2-231	ENST00000528216	RBSN	Q9H1K0	784 aa		12.05	□□□□□ -0.48
PGAP2-231	ENST00000528216	GREM2	Q9H772	168 aa		12.05	□□□□□ -0.48
PGAP2-231	ENST00000528216	TBC1D2B	Q9UPU7	963 aa		12.05	□□□□□ -0.48
PGAP2-231	ENST00000528216	AKAP11	Q9UKA4	1901 aa		12.05	□□□□□ -0.48
PGAP2-231	ENST00000528216	ESPN	B1AK53	854 aa		12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	SLC5A1	P13866	664 aa		12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	GPT	P24298	496 aa		12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	MCM5	P33992	734 aa		12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	KCNQ4	P56696	695 aa		12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	TXNRD1	Q16881	649 aa		12.04	□□□□□ -0.48
PGAP2-231	ENST00000528216	CLEC4G	Q6UXB4	293 aa		12.04	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms