RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 SHTN1A0MZ66 631 aa14.53□□□□□ -0.08
CCDC90B-210ENST00000528149 GRM8O00222 908 aa14.53□□□□□ -0.08
CCDC90B-210ENST00000528149 PDE8AO60658 829 aa14.53□□□□□ -0.08
CCDC90B-210ENST00000528149 CENPBP07199 599 aaPredicted RBP14.53□□□□□ -0.08
CCDC90B-210ENST00000528149 USP48Q86UV5 1035 aa14.53□□□□□ -0.08
CCDC90B-210ENST00000528149 ZC3H15Q8WU90 426 aaKnown RBP14.53□□□□□ -0.08
CCDC90B-210ENST00000528149 KAZALD1Q96I82 304 aa14.53□□□□□ -0.08
CCDC90B-210ENST00000528149 SUCLG2Q96I99 432 aa14.53□□□□□ -0.08
CCDC90B-210ENST00000528149 NBPF7P0C2Y1 421 aaPredicted RBP14.52□□□□□ -0.09
CCDC90B-210ENST00000528149 GPSM2P81274 684 aa14.52□□□□□ -0.09
CCDC90B-210ENST00000528149 FOXO4P98177 505 aa14.52□□□□□ -0.09
CCDC90B-210ENST00000528149 DDX46Q7L014 1031 aaKnown RBP14.52□□□□□ -0.09
CCDC90B-210ENST00000528149 TTLL11Q8NHH1 800 aa14.52□□□□□ -0.09
CCDC90B-210ENST00000528149 MEIS3Q99687 375 aa14.52□□□□□ -0.09
CCDC90B-210ENST00000528149 C9orf78Q9NZ63 289 aaPredicted RBP14.52□□□□□ -0.09
CCDC90B-210ENST00000528149 COG6Q9Y2V7 657 aa14.52□□□□□ -0.09
CCDC90B-210ENST00000528149 MS4A1P11836 297 aa14.51□□□□□ -0.09
CCDC90B-210ENST00000528149 ZNF157P51786 506 aaPredicted RBP14.51□□□□□ -0.09
CCDC90B-210ENST00000528149 CCDC102AQ96A19 550 aa14.51□□□□□ -0.09
CCDC90B-210ENST00000528149 CSRNP1Q96S65 589 aa14.51□□□□□ -0.09
CCDC90B-210ENST00000528149 GBA2Q9HCG7 927 aaPredicted RBP14.51□□□□□ -0.09
CCDC90B-210ENST00000528149 ZNRF3Q9ULT6 936 aa14.51□□□□□ -0.09
CCDC90B-210ENST00000528149 ATP6V0A2Q9Y487 856 aa14.51□□□□□ -0.09
CCDC90B-210ENST00000528149 SZT2Q5T011 3432 aa14.51□□□□□ -0.09
CCDC90B-210ENST00000528149 TRIOBPQ9H2D6 2365 aa14.5□□□□□ -0.09
CCDC90B-210ENST00000528149 SNAP23O00161 211 aa14.5□□□□□ -0.09
CCDC90B-210ENST00000528149 SLC10A3P09131 477 aa14.5□□□□□ -0.09
CCDC90B-210ENST00000528149 PKN2Q16513 984 aaKnown RBP14.5□□□□□ -0.09
CCDC90B-210ENST00000528149 GRIPAP1Q4V328 841 aa14.5□□□□□ -0.09
CCDC90B-210ENST00000528149 ZNF594Q96JF6 807 aaPredicted RBP14.5□□□□□ -0.09
CCDC90B-210ENST00000528149 USP44Q9H0E7 712 aa14.5□□□□□ -0.09
CCDC90B-210ENST00000528149 HTTP42858 3142 aa14.49□□□□□ -0.09
CCDC90B-210ENST00000528149 UTYO14607 1347 aa14.49□□□□□ -0.09
CCDC90B-210ENST00000528149 PDE3AQ14432 1141 aa14.49□□□□□ -0.09
CCDC90B-210ENST00000528149 MVPQ14764 893 aaKnown RBP14.49□□□□□ -0.09
CCDC90B-210ENST00000528149 CUL9Q8IWT3 2517 aa14.49□□□□□ -0.09
CCDC90B-210ENST00000528149 POLR2AP24928 1970 aaKnown RBP14.49□□□□□ -0.09
CCDC90B-210ENST00000528149 RAD17O75943 681 aa14.48□□□□□ -0.09
CCDC90B-210ENST00000528149 UBTFL1P0CB47 393 aaPredicted RBP14.48□□□□□ -0.09
CCDC90B-210ENST00000528149 IRX6P78412 446 aaPredicted RBP14.48□□□□□ -0.09
CCDC90B-210ENST00000528149 ANKRD44Q8N8A2 993 aa14.48□□□□□ -0.09
CCDC90B-210ENST00000528149 POLLQ9UGP5 575 aa14.48□□□□□ -0.09
CCDC90B-210ENST00000528149 HDAC9Q9UKV0 1011 aa14.48□□□□□ -0.09
CCDC90B-210ENST00000528149 CEP290O15078 2479 aa14.47□□□□□ -0.09
CCDC90B-210ENST00000528149 ADM5C9JUS6 153 aa14.47□□□□□ -0.09
CCDC90B-210ENST00000528149 KLRK1P26718 216 aa14.47□□□□□ -0.09
CCDC90B-210ENST00000528149 CCDC152Q4G0S7 254 aa14.47□□□□□ -0.09
CCDC90B-210ENST00000528149 LMBR1LQ6UX01 489 aa14.47□□□□□ -0.09
CCDC90B-210ENST00000528149 KRT26Q7Z3Y9 468 aa14.47□□□□□ -0.09
CCDC90B-210ENST00000528149 SP8Q8IXZ3 490 aa14.47□□□□□ -0.09
CCDC90B-210ENST00000528149 MICALL2Q8IY33 904 aa14.47□□□□□ -0.09
CCDC90B-210ENST00000528149 C2orf69Q8N8R5 385 aa14.47□□□□□ -0.09
CCDC90B-210ENST00000528149 ZNF296Q8WUU4 475 aaPredicted RBP14.47□□□□□ -0.09
CCDC90B-210ENST00000528149 CRBNQ96SW2 442 aa14.47□□□□□ -0.09
CCDC90B-210ENST00000528149 CNOT7Q9UIV1 285 aaKnown RBP14.47□□□□□ -0.09
CCDC90B-210ENST00000528149 CHMP3Q9Y3E7 222 aa14.47□□□□□ -0.09
CCDC90B-210ENST00000528149 LRRFIP2Q9Y608 721 aaKnown RBP14.47□□□□□ -0.09
CCDC90B-210ENST00000528149 ZNF646O15015 1829 aaPredicted RBP14.46□□□□□ -0.09
CCDC90B-210ENST00000528149 SCN9AQ15858 1988 aa14.46□□□□□ -0.09
CCDC90B-210ENST00000528149 RIMBP2O15034 1052 aa14.46□□□□□ -0.09
CCDC90B-210ENST00000528149 CSF1RP07333 972 aa14.46□□□□□ -0.09
CCDC90B-210ENST00000528149 ITGA6P23229 1130 aa14.46□□□□□ -0.09
CCDC90B-210ENST00000528149 RPS8P62241 208 aaKnown RBP14.46□□□□□ -0.09
CCDC90B-210ENST00000528149 DPP8Q6V1X1 898 aaPredicted RBP14.46□□□□□ -0.09
CCDC90B-210ENST00000528149 MPNDQ8N594 471 aa14.46□□□□□ -0.09
CCDC90B-210ENST00000528149 KLHDC4Q8TBB5 520 aa14.46□□□□□ -0.09
CCDC90B-210ENST00000528149 PLA2G12BQ9BX93 195 aa14.46□□□□□ -0.09
CCDC90B-210ENST00000528149 BICC1Q9H694 974 aaKnown RBP14.46□□□□□ -0.09
CCDC90B-210ENST00000528149 C1orf115Q9H7X2 142 aa14.46□□□□□ -0.09
CCDC90B-210ENST00000528149 KCNQ5Q9NR82 932 aa14.46□□□□□ -0.09
CCDC90B-210ENST00000528149 KIAA0100Q14667 2235 aaKnown RBP14.45□□□□□ -0.1
CCDC90B-210ENST00000528149 YDJCA8MPS7 323 aa14.45□□□□□ -0.1
CCDC90B-210ENST00000528149 BBOX1O75936 387 aa14.45□□□□□ -0.1
CCDC90B-210ENST00000528149 EGFRP00533 1210 aa14.45□□□□□ -0.1
CCDC90B-210ENST00000528149 GNAI3P08754 354 aa14.45□□□□□ -0.1
CCDC90B-210ENST00000528149 FBXO46Q6PJ61 603 aaPredicted RBP14.45□□□□□ -0.1
CCDC90B-210ENST00000528149 RASAL3Q86YV0 1011 aa14.45□□□□□ -0.1
CCDC90B-210ENST00000528149 HELBQ8NG08 1087 aaPredicted RBP14.45□□□□□ -0.1
CCDC90B-210ENST00000528149 PUS3Q9BZE2 481 aaKnown RBP14.45□□□□□ -0.1
CCDC90B-210ENST00000528149 VPS33BQ9H267 617 aa14.45□□□□□ -0.1
CCDC90B-210ENST00000528149 DDX19BQ9UMR2 479 aa14.45□□□□□ -0.1
CCDC90B-210ENST00000528149 NSFL1CQ9UNZ2 370 aaKnown RBP14.45□□□□□ -0.1
CCDC90B-210ENST00000528149 RTL9Q8NET4 1388 aa14.45□□□□□ -0.1
CCDC90B-210ENST00000528149 BRCA2P51587 3418 aa14.44□□□□□ -0.1
CCDC90B-210ENST00000528149 ZBTB7BO15156 539 aaPredicted RBP14.44□□□□□ -0.1
CCDC90B-210ENST00000528149 HSP90B1P14625 803 aaKnown RBP14.44□□□□□ -0.1
CCDC90B-210ENST00000528149 TNIP1Q15025 636 aa14.44□□□□□ -0.1
CCDC90B-210ENST00000528149 DOK7Q18PE1 504 aa14.44□□□□□ -0.1
CCDC90B-210ENST00000528149 SAMD7Q7Z3H4 446 aa14.44□□□□□ -0.1
CCDC90B-210ENST00000528149 ANKRD18AQ8IVF6 992 aa14.44□□□□□ -0.1
CCDC90B-210ENST00000528149 RTFDC1Q9BY42 306 aaPredicted RBP14.44□□□□□ -0.1
CCDC90B-210ENST00000528149 CENPFP49454 3210 aa14.43□□□□□ -0.1
CCDC90B-210ENST00000528149 H7C1D1 291 aa14.43□□□□□ -0.1
CCDC90B-210ENST00000528149 DLL1O00548 723 aa14.43□□□□□ -0.1
CCDC90B-210ENST00000528149 TBC1D8O95759 1140 aa14.43□□□□□ -0.1
CCDC90B-210ENST00000528149 TBC1D10BQ4KMP7 808 aaPredicted RBP14.43□□□□□ -0.1
CCDC90B-210ENST00000528149 TXNRD3Q86VQ6 643 aa14.43□□□□□ -0.1
CCDC90B-210ENST00000528149 TBC1D16Q8TBP0 767 aa14.43□□□□□ -0.1
CCDC90B-210ENST00000528149 DBNDD1Q9H9R9 158 aa14.43□□□□□ -0.1
CCDC90B-210ENST00000528149 MINPP1Q9UNW1 487 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms