RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 STRIP1Q5VSL9 837 aa17.99■□□□□ 0.47
CAPN1-212ENST00000527887 CYP4F22Q6NT55 531 aa17.99■□□□□ 0.47
CAPN1-212ENST00000527887 SULF1Q8IWU6 871 aa17.99■□□□□ 0.47
CAPN1-212ENST00000527887 BEGAINQ9BUH8 593 aa17.99■□□□□ 0.47
CAPN1-212ENST00000527887 FOXO4P98177 505 aa17.98■□□□□ 0.47
CAPN1-212ENST00000527887 OGFOD1Q8N543 542 aa17.98■□□□□ 0.47
CAPN1-212ENST00000527887 SRCIN1Q9C0H9 1055 aa17.98■□□□□ 0.47
CAPN1-212ENST00000527887 ZNF408Q9H9D4 720 aa17.98■□□□□ 0.47
CAPN1-212ENST00000527887 C9orf78Q9NZ63 289 aaPredicted RBP17.98■□□□□ 0.47
CAPN1-212ENST00000527887 KCNJ4P48050 445 aa17.97■□□□□ 0.47
CAPN1-212ENST00000527887 CHRNDQ07001 517 aa17.97■□□□□ 0.47
CAPN1-212ENST00000527887 CCDC57Q2TAC2 916 aa17.97■□□□□ 0.47
CAPN1-212ENST00000527887 C15orf52Q6ZUT6 534 aaKnown RBP17.97■□□□□ 0.47
CAPN1-212ENST00000527887 C2orf69Q8N8R5 385 aa17.97■□□□□ 0.47
CAPN1-212ENST00000527887 MYOZ2Q9NPC6 264 aa17.97■□□□□ 0.47
CAPN1-212ENST00000527887 PITPNM2Q9BZ72 1349 aa17.97■□□□□ 0.47
CAPN1-212ENST00000527887 WTIPA6NIX2 430 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-212ENST00000527887 CA12O43570 354 aa17.96■□□□□ 0.47
CAPN1-212ENST00000527887 DACT2Q5SW24 774 aa17.96■□□□□ 0.47
CAPN1-212ENST00000527887 LMBR1LQ6UX01 489 aa17.96■□□□□ 0.47
CAPN1-212ENST00000527887 GGA3Q9NZ52 723 aa17.96■□□□□ 0.47
CAPN1-212ENST00000527887 TRPM7Q96QT4 1865 aa17.95■□□□□ 0.46
CAPN1-212ENST00000527887 SCARF1Q14162 830 aa17.95■□□□□ 0.46
CAPN1-212ENST00000527887 TTLL5Q6EMB2 1281 aa17.95■□□□□ 0.46
CAPN1-212ENST00000527887 SLC4A10Q6U841 1118 aa17.95■□□□□ 0.46
CAPN1-212ENST00000527887 GBA2Q9HCG7 927 aaPredicted RBP17.95■□□□□ 0.46
CAPN1-212ENST00000527887 CHMP3Q9Y3E7 222 aa17.95■□□□□ 0.46
CAPN1-212ENST00000527887 PTPRCP08575 1304 aa17.95■□□□□ 0.46
CAPN1-212ENST00000527887 MYH3P11055 1940 aa17.94■□□□□ 0.46
CAPN1-212ENST00000527887 BRPF1P55201 1214 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-212ENST00000527887 HUNKP57058 714 aa17.94■□□□□ 0.46
CAPN1-212ENST00000527887 NOGQ13253 232 aa17.94■□□□□ 0.46
CAPN1-212ENST00000527887 GRM1Q13255 1194 aa17.94■□□□□ 0.46
CAPN1-212ENST00000527887 TAF7LQ5H9L4 462 aa17.94■□□□□ 0.46
CAPN1-212ENST00000527887 HSPA8P11142 646 aaKnown RBP17.93■□□□□ 0.46
CAPN1-212ENST00000527887 LBX1P52954 281 aa17.93■□□□□ 0.46
CAPN1-212ENST00000527887 SLFN5Q08AF3 891 aa17.93■□□□□ 0.46
CAPN1-212ENST00000527887 ANGEL2Q5VTE6 544 aaKnown RBP17.93■□□□□ 0.46
CAPN1-212ENST00000527887 LDHAL6AQ6ZMR3 332 aa17.93■□□□□ 0.46
CAPN1-212ENST00000527887 TXNRD3Q86VQ6 643 aa17.93■□□□□ 0.46
CAPN1-212ENST00000527887 MRPL50Q8N5N7 158 aaKnown RBP17.93■□□□□ 0.46
CAPN1-212ENST00000527887 CCDC102AQ96A19 550 aa17.93■□□□□ 0.46
CAPN1-212ENST00000527887 HDAC9Q9UKV0 1011 aa17.93■□□□□ 0.46
CAPN1-212ENST00000527887 UTYO14607 1347 aa17.93■□□□□ 0.46
CAPN1-212ENST00000527887 SCN9AQ15858 1988 aa17.92■□□□□ 0.46
CAPN1-212ENST00000527887 ADM5C9JUS6 153 aa17.92■□□□□ 0.46
CAPN1-212ENST00000527887 CCER2I3L3R5 266 aa17.92■□□□□ 0.46
CAPN1-212ENST00000527887 FKBP1BP68106 108 aa17.92■□□□□ 0.46
CAPN1-212ENST00000527887 EPHA10Q5JZY3 1008 aa17.92■□□□□ 0.46
CAPN1-212ENST00000527887 RGMBQ6NW40 437 aa17.92■□□□□ 0.46
CAPN1-212ENST00000527887 CD209Q9NNX6 404 aa17.92■□□□□ 0.46
CAPN1-212ENST00000527887 AOC2O75106 756 aa17.91■□□□□ 0.46
CAPN1-212ENST00000527887 CT47B1P0C2W7 299 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-212ENST00000527887 ALDH1L2Q3SY69 923 aa17.91■□□□□ 0.46
CAPN1-212ENST00000527887 FBXW7Q969H0 707 aa17.91■□□□□ 0.46
CAPN1-212ENST00000527887 CDCA5Q96FF9 252 aa17.91■□□□□ 0.46
CAPN1-212ENST00000527887 CNNM1Q9NRU3 951 aa17.91■□□□□ 0.46
CAPN1-212ENST00000527887 THSD7BQ9C0I4 1608 aa17.9■□□□□ 0.46
CAPN1-212ENST00000527887 FKBP1AP62942 108 aaKnown RBP17.9■□□□□ 0.46
CAPN1-212ENST00000527887 GTF2IP78347 998 aa17.9■□□□□ 0.46
CAPN1-212ENST00000527887 ZNF804AQ7Z570 1209 aa17.9■□□□□ 0.46
CAPN1-212ENST00000527887 IRS2Q9Y4H2 1338 aa17.9■□□□□ 0.46
CAPN1-212ENST00000527887 WNT10BO00744 389 aa17.89■□□□□ 0.45
CAPN1-212ENST00000527887 TAF5LO75529 589 aa17.89■□□□□ 0.45
CAPN1-212ENST00000527887 IL1R1P14778 569 aa17.89■□□□□ 0.45
CAPN1-212ENST00000527887 KLRK1P26718 216 aa17.89■□□□□ 0.45
CAPN1-212ENST00000527887 UBE4AQ14139 1066 aa17.89■□□□□ 0.45
CAPN1-212ENST00000527887 DLK2Q6UY11 383 aa17.89■□□□□ 0.45
CAPN1-212ENST00000527887 SSH1Q8WYL5 1049 aa17.89■□□□□ 0.45
CAPN1-212ENST00000527887 ASTN2O75129 1339 aaPredicted RBP17.89■□□□□ 0.45
CAPN1-212ENST00000527887 RABL6Q3YEC7 729 aaPredicted RBP17.88■□□□□ 0.45
CAPN1-212ENST00000527887 REM2Q8IYK8 340 aaPredicted RBP17.88■□□□□ 0.45
CAPN1-212ENST00000527887 TRMT2AQ8IZ69 625 aaKnown RBP17.88■□□□□ 0.45
CAPN1-212ENST00000527887 HELBQ8NG08 1087 aaPredicted RBP17.88■□□□□ 0.45
CAPN1-212ENST00000527887 SUCLG2Q96I99 432 aa17.88■□□□□ 0.45
CAPN1-212ENST00000527887 PSME4Q14997 1843 aa17.88■□□□□ 0.45
CAPN1-212ENST00000527887 NBPF7P0C2Y1 421 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-212ENST00000527887 ZNF157P51786 506 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-212ENST00000527887 NBPF9Q3BBW0 867 aa17.87■□□□□ 0.45
CAPN1-212ENST00000527887 MIER1Q8N108 512 aa17.87■□□□□ 0.45
CAPN1-212ENST00000527887 KAZALD1Q96I82 304 aa17.87■□□□□ 0.45
CAPN1-212ENST00000527887 ZNF594Q96JF6 807 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-212ENST00000527887 MXD3Q9BW11 206 aa17.87■□□□□ 0.45
CAPN1-212ENST00000527887 FAM155AB1AL88 458 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-212ENST00000527887 NF2P35240 595 aa17.86■□□□□ 0.45
CAPN1-212ENST00000527887 APOBEC3FQ8IUX4 373 aaKnown RBP17.86■□□□□ 0.45
CAPN1-212ENST00000527887 KIAA0825Q8IV33 1275 aa17.86■□□□□ 0.45
CAPN1-212ENST00000527887 MTMR14Q8NCE2 650 aa17.86■□□□□ 0.45
CAPN1-212ENST00000527887 MROH5Q6ZUA9 1318 aa17.86■□□□□ 0.45
CAPN1-212ENST00000527887 SNAP23O00161 211 aa17.85■□□□□ 0.45
CAPN1-212ENST00000527887 PLIN1O60240 522 aa17.85■□□□□ 0.45
CAPN1-212ENST00000527887 SASH1O94885 1247 aa17.85■□□□□ 0.45
CAPN1-212ENST00000527887 ZBED3Q96IU2 234 aaPredicted RBP17.85■□□□□ 0.45
CAPN1-212ENST00000527887 RIPOR2Q9Y4F9 1068 aa17.85■□□□□ 0.45
CAPN1-212ENST00000527887 SLC10A3P09131 477 aa17.84■□□□□ 0.45
CAPN1-212ENST00000527887 DLGAP5Q15398 846 aa17.84■□□□□ 0.45
CAPN1-212ENST00000527887 BICC1Q9H694 974 aaKnown RBP17.84■□□□□ 0.45
CAPN1-212ENST00000527887 SAGE1Q9NXZ1 904 aa17.84■□□□□ 0.45
CAPN1-212ENST00000527887 FAM205AQ6ZU69 1335 aa17.83■□□□□ 0.44
CAPN1-212ENST00000527887 HIBADHP31937 336 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms