RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ADORA1P30542 326 aa18.14■□□□□ 0.49
USH1C-207ENST00000527720 TTC6Q86TZ1 520 aa18.14■□□□□ 0.49
USH1C-207ENST00000527720 RNF214Q8ND24 703 aa18.14■□□□□ 0.49
USH1C-207ENST00000527720 ZSCAN16Q9H4T2 348 aaPredicted RBP18.14■□□□□ 0.49
USH1C-207ENST00000527720 KIF3AQ9Y496 699 aa18.14■□□□□ 0.49
USH1C-207ENST00000527720 ITGA6P23229 1130 aa18.14■□□□□ 0.49
USH1C-207ENST00000527720 MSNP26038 577 aaKnown RBP18.14■□□□□ 0.49
USH1C-207ENST00000527720 HMGN5P82970 282 aaKnown RBP18.14■□□□□ 0.49
USH1C-207ENST00000527720 ATP2B3Q16720 1220 aa18.14■□□□□ 0.49
USH1C-207ENST00000527720 OSBP2Q969R2 916 aa18.14■□□□□ 0.49
USH1C-207ENST00000527720 NOL7Q9UMY1 257 aaKnown RBP18.14■□□□□ 0.49
USH1C-207ENST00000527720 NRAPQ86VF7 1730 aa18.14■□□□□ 0.49
USH1C-207ENST00000527720 LRP5O75197 1615 aa18.13■□□□□ 0.49
USH1C-207ENST00000527720 SCRN1Q12765 414 aa18.13■□□□□ 0.49
USH1C-207ENST00000527720 SLFNL1Q499Z3 407 aa18.13■□□□□ 0.49
USH1C-207ENST00000527720 METTL24Q5JXM2 366 aa18.13■□□□□ 0.49
USH1C-207ENST00000527720 LDHAL6AQ6ZMR3 332 aa18.13■□□□□ 0.49
USH1C-207ENST00000527720 FERMT3Q86UX7 667 aa18.13■□□□□ 0.49
USH1C-207ENST00000527720 APPBP2Q92624 585 aa18.13■□□□□ 0.49
USH1C-207ENST00000527720 AK7Q96M32 723 aa18.13■□□□□ 0.49
USH1C-207ENST00000527720 ZBTB1Q9Y2K1 713 aa18.13■□□□□ 0.49
USH1C-207ENST00000527720 RREB1Q92766 1687 aa18.13■□□□□ 0.49
USH1C-207ENST00000527720 IRS4O14654 1257 aaPredicted RBP18.12■□□□□ 0.49
USH1C-207ENST00000527720 PDE8AO60658 829 aa18.12■□□□□ 0.49
USH1C-207ENST00000527720 DTNBO60941 627 aa18.12■□□□□ 0.49
USH1C-207ENST00000527720 GPTP24298 496 aa18.12■□□□□ 0.49
USH1C-207ENST00000527720 ZNF274Q96GC6 653 aaPredicted RBP18.12■□□□□ 0.49
USH1C-207ENST00000527720 CCDC39Q9UFE4 941 aa18.12■□□□□ 0.49
USH1C-207ENST00000527720 JAK2O60674 1132 aa18.12■□□□□ 0.49
USH1C-207ENST00000527720 MCM5P33992 734 aa18.12■□□□□ 0.49
USH1C-207ENST00000527720 FUCA2Q9BTY2 467 aa18.12■□□□□ 0.49
USH1C-207ENST00000527720 GREM2Q9H772 168 aa18.12■□□□□ 0.49
USH1C-207ENST00000527720 ZSCAN25Q6NSZ9 544 aa18.11■□□□□ 0.49
USH1C-207ENST00000527720 CCDC85AQ96PX6 553 aaPredicted RBP18.11■□□□□ 0.49
USH1C-207ENST00000527720 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.11■□□□□ 0.49
USH1C-207ENST00000527720 TRMT112Q9UI30 125 aaKnown RBP18.11■□□□□ 0.49
USH1C-207ENST00000527720 RESTQ13127 1097 aa18.11■□□□□ 0.49
USH1C-207ENST00000527720 TTF1Q15361 905 aaPredicted RBP18.11■□□□□ 0.49
USH1C-207ENST00000527720 NAA16Q6N069 864 aaPredicted RBP18.11■□□□□ 0.49
USH1C-207ENST00000527720 DZIP3Q86Y13 1208 aaKnown RBP18.11■□□□□ 0.49
USH1C-207ENST00000527720 VGLL2Q8N8G2 317 aa18.11■□□□□ 0.49
USH1C-207ENST00000527720 SPATA32Q96LK8 384 aa18.11■□□□□ 0.49
USH1C-207ENST00000527720 THRAP3Q9Y2W1 955 aaKnown RBP18.11■□□□□ 0.49
USH1C-207ENST00000527720 H3BQV1 296 aa18.1■□□□□ 0.49
USH1C-207ENST00000527720 ATRNO75882 1429 aa18.1■□□□□ 0.49
USH1C-207ENST00000527720 ZAP70P43403 619 aa18.1■□□□□ 0.49
USH1C-207ENST00000527720 EVCP57679 992 aa18.1■□□□□ 0.49
USH1C-207ENST00000527720 IMMTQ16891 758 aaKnown RBP18.1■□□□□ 0.49
USH1C-207ENST00000527720 WASHC4Q2M389 1173 aa18.1■□□□□ 0.49
USH1C-207ENST00000527720 IFFO2Q5TF58 517 aa18.1■□□□□ 0.49
USH1C-207ENST00000527720 ZNF34Q8IZ26 560 aa18.1■□□□□ 0.49
USH1C-207ENST00000527720 NSUN7Q8NE18 718 aaKnown RBP18.1■□□□□ 0.49
USH1C-207ENST00000527720 LRRC2Q9BYS8 371 aa18.1■□□□□ 0.49
USH1C-207ENST00000527720 CNNM1Q9NRU3 951 aa18.1■□□□□ 0.49
USH1C-207ENST00000527720 MYO5AQ9Y4I1 1855 aaKnown RBP18.1■□□□□ 0.49
USH1C-207ENST00000527720 PHLPP1O60346 1717 aa18.1■□□□□ 0.49
USH1C-207ENST00000527720 SCARF1Q14162 830 aa18.1■□□□□ 0.49
USH1C-207ENST00000527720 SYNE4Q8N205 404 aa18.1■□□□□ 0.49
USH1C-207ENST00000527720 LAMB2P55268 1798 aa18.09■□□□□ 0.49
USH1C-207ENST00000527720 APOBRQ0VD83 1088 aa18.09■□□□□ 0.49
USH1C-207ENST00000527720 LEO1Q8WVC0 666 aaPredicted RBP18.09■□□□□ 0.49
USH1C-207ENST00000527720 SYTL4Q96C24 671 aaPredicted RBP18.09■□□□□ 0.49
USH1C-207ENST00000527720 CFAP45Q9UL16 551 aa18.09■□□□□ 0.49
USH1C-207ENST00000527720 PDE8BO95263 885 aa18.09■□□□□ 0.49
USH1C-207ENST00000527720 WDR19Q8NEZ3 1342 aa18.08■□□□□ 0.49
USH1C-207ENST00000527720 SALL1Q9NSC2 1324 aa18.08■□□□□ 0.49
USH1C-207ENST00000527720 DOCK2Q92608 1830 aa18.08■□□□□ 0.49
USH1C-207ENST00000527720 GOLGA6L4A6NEF3 574 aa18.08■□□□□ 0.48
USH1C-207ENST00000527720 ZKSCAN5Q9Y2L8 839 aa18.08■□□□□ 0.48
USH1C-207ENST00000527720 MROH5Q6ZUA9 1318 aa18.08■□□□□ 0.48
USH1C-207ENST00000527720 FOXP2O15409 715 aa18.07■□□□□ 0.48
USH1C-207ENST00000527720 MCAMP43121 646 aa18.07■□□□□ 0.48
USH1C-207ENST00000527720 ATL3Q6DD88 541 aa18.07■□□□□ 0.48
USH1C-207ENST00000527720 FAM173BQ6P4H8 233 aa18.07■□□□□ 0.48
USH1C-207ENST00000527720 PTPDC1A2A3K4 754 aa18.07■□□□□ 0.48
USH1C-207ENST00000527720 ZNF500O60304 480 aaPredicted RBP18.07■□□□□ 0.48
USH1C-207ENST00000527720 CTDNEP1O95476 244 aa18.07■□□□□ 0.48
USH1C-207ENST00000527720 FGAP02671 866 aa18.07■□□□□ 0.48
USH1C-207ENST00000527720 UQCRFS1P1P0C7P4 283 aa18.07■□□□□ 0.48
USH1C-207ENST00000527720 CCDC192P0DO97 292 aa18.07■□□□□ 0.48
USH1C-207ENST00000527720 HCLS1P14317 486 aaPredicted RBP18.07■□□□□ 0.48
USH1C-207ENST00000527720 PDIA3P30101 505 aaKnown RBP18.07■□□□□ 0.48
USH1C-207ENST00000527720 EIF5P55010 431 aaKnown RBP18.07■□□□□ 0.48
USH1C-207ENST00000527720 GIMAP6Q6P9H5 292 aa18.07■□□□□ 0.48
USH1C-207ENST00000527720 DDX11Q96FC9 970 aa18.07■□□□□ 0.48
USH1C-207ENST00000527720 DDX19AQ9NUU7 478 aaKnown RBP18.07■□□□□ 0.48
USH1C-207ENST00000527720 UBN2Q6ZU65 1347 aa18.07■□□□□ 0.48
USH1C-207ENST00000527720 A0A0G2JLW4 131 aa18.06■□□□□ 0.48
USH1C-207ENST00000527720 ARID4AP29374 1257 aaPredicted RBP18.06■□□□□ 0.48
USH1C-207ENST00000527720 TTLL5Q6EMB2 1281 aa18.06■□□□□ 0.48
USH1C-207ENST00000527720 PUS7LQ9H0K6 701 aaKnown RBP18.06■□□□□ 0.48
USH1C-207ENST00000527720 NUP62CLQ9H1M0 184 aa18.06■□□□□ 0.48
USH1C-207ENST00000527720 SPATA31A1Q5TZJ5 1347 aa18.06■□□□□ 0.48
USH1C-207ENST00000527720 GPAA1O43292 621 aa18.06■□□□□ 0.48
USH1C-207ENST00000527720 ADD2P35612 726 aa18.06■□□□□ 0.48
USH1C-207ENST00000527720 UBE3CQ15386 1083 aa18.06■□□□□ 0.48
USH1C-207ENST00000527720 MAP3K11Q16584 847 aa18.06■□□□□ 0.48
USH1C-207ENST00000527720 TBC1D2BQ9UPU7 963 aa18.06■□□□□ 0.48
USH1C-207ENST00000527720 PUM3Q15397 648 aaKnown RBP18.05■□□□□ 0.48
USH1C-207ENST00000527720 TPRNQ4KMQ1 711 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms