RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 STXBP5LQ9Y2K9 1186 aa12.82□□□□□ -0.36
CAPN1-210ENST00000527699 PTPN22Q9Y2R2 807 aa12.82□□□□□ -0.36
CAPN1-210ENST00000527699 KIF4BQ2VIQ3 1234 aa12.81□□□□□ -0.36
CAPN1-210ENST00000527699 TMC4Q7Z404 712 aa12.81□□□□□ -0.36
CAPN1-210ENST00000527699 FBXW7Q969H0 707 aa12.81□□□□□ -0.36
CAPN1-210ENST00000527699 ARMC5Q96C12 935 aa12.81□□□□□ -0.36
CAPN1-210ENST00000527699 CDCA5Q96FF9 252 aa12.81□□□□□ -0.36
CAPN1-210ENST00000527699 GGA3Q9NZ52 723 aa12.81□□□□□ -0.36
CAPN1-210ENST00000527699 SREBF2Q12772 1141 aa12.8□□□□□ -0.36
CAPN1-210ENST00000527699 Q7L0L9 218 aa12.8□□□□□ -0.36
CAPN1-210ENST00000527699 ZBTB38Q8NAP3 1195 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-210ENST00000527699 DPF2Q92785 391 aa12.8□□□□□ -0.36
CAPN1-210ENST00000527699 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-210ENST00000527699 RAPGEFL1Q9UHV5 662 aa12.8□□□□□ -0.36
CAPN1-210ENST00000527699 GGA1Q9UJY5 639 aa12.8□□□□□ -0.36
CAPN1-210ENST00000527699 HOXB7P09629 217 aa12.79□□□□□ -0.36
CAPN1-210ENST00000527699 TM4SF4P48230 202 aa12.79□□□□□ -0.36
CAPN1-210ENST00000527699 TTLL12Q14166 644 aaPredicted RBP12.79□□□□□ -0.36
CAPN1-210ENST00000527699 PRAMEF18Q5VWM3 479 aa12.79□□□□□ -0.36
CAPN1-210ENST00000527699 TSPYL6Q8N831 410 aa12.79□□□□□ -0.36
CAPN1-210ENST00000527699 FAM122AQ96E09 287 aa12.79□□□□□ -0.36
CAPN1-210ENST00000527699 MXD3Q9BW11 206 aa12.79□□□□□ -0.36
CAPN1-210ENST00000527699 LRRC37AA6NMS7 1700 aa12.79□□□□□ -0.36
CAPN1-210ENST00000527699 ZNF853P0CG23 659 aa12.78□□□□□ -0.36
CAPN1-210ENST00000527699 SCARF1Q14162 830 aa12.78□□□□□ -0.36
CAPN1-210ENST00000527699 ANGEL2Q5VTE6 544 aaKnown RBP12.78□□□□□ -0.36
CAPN1-210ENST00000527699 MOB2Q70IA6 237 aa12.78□□□□□ -0.36
CAPN1-210ENST00000527699 NBPF11Q86T75 865 aa12.78□□□□□ -0.36
CAPN1-210ENST00000527699 CD99L2Q8TCZ2 262 aa12.78□□□□□ -0.36
CAPN1-210ENST00000527699 TSR2Q969E8 191 aaKnown RBP12.78□□□□□ -0.36
CAPN1-210ENST00000527699 ERO1AQ96HE7 468 aa12.78□□□□□ -0.36
CAPN1-210ENST00000527699 MAP3K2Q9Y2U5 619 aa12.78□□□□□ -0.36
CAPN1-210ENST00000527699 UBE2Q2LH0YL09 131 aa12.77□□□□□ -0.37
CAPN1-210ENST00000527699 PDE8AO60658 829 aa12.77□□□□□ -0.37
CAPN1-210ENST00000527699 PCCAP05165 728 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-210ENST00000527699 VIL1P09327 827 aaKnown RBP12.77□□□□□ -0.37
CAPN1-210ENST00000527699 GNAI1P63096 354 aa12.77□□□□□ -0.37
CAPN1-210ENST00000527699 SLC9C1Q4G0N8 1177 aa12.77□□□□□ -0.37
CAPN1-210ENST00000527699 CCDC152Q4G0S7 254 aa12.77□□□□□ -0.37
CAPN1-210ENST00000527699 ANKRD18AQ8IVF6 992 aa12.77□□□□□ -0.37
CAPN1-210ENST00000527699 ZNF333Q96JL9 665 aa12.77□□□□□ -0.37
CAPN1-210ENST00000527699 EFCC1Q9HA90 598 aa12.77□□□□□ -0.37
CAPN1-210ENST00000527699 IFT57Q9NWB7 429 aa12.77□□□□□ -0.37
CAPN1-210ENST00000527699 CWC25Q9NXE8 425 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-210ENST00000527699 NR2E3Q9Y5X4 410 aa12.77□□□□□ -0.37
CAPN1-210ENST00000527699 RPS12P25398 132 aaKnown RBP12.76□□□□□ -0.37
CAPN1-210ENST00000527699 PLA2G5P39877 138 aa12.76□□□□□ -0.37
CAPN1-210ENST00000527699 FKBP1BP68106 108 aa12.76□□□□□ -0.37
CAPN1-210ENST00000527699 TRIM28Q13263 835 aaKnown RBP12.76□□□□□ -0.37
CAPN1-210ENST00000527699 CCDC184Q52MB2 194 aa12.76□□□□□ -0.37
CAPN1-210ENST00000527699 RSBN1LQ6PCB5 846 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-210ENST00000527699 METTL22Q9BUU2 404 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-210ENST00000527699 PRO3102Q9H379 93 aa12.76□□□□□ -0.37
CAPN1-210ENST00000527699 PRKRIP1Q9H875 184 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-210ENST00000527699 A0A1W2PPC1 479 aa12.75□□□□□ -0.37
CAPN1-210ENST00000527699 ALDH1A1P00352 501 aa12.75□□□□□ -0.37
CAPN1-210ENST00000527699 SCN9AQ15858 1988 aa12.75□□□□□ -0.37
CAPN1-210ENST00000527699 CWF19L2Q2TBE0 894 aaKnown RBP12.75□□□□□ -0.37
CAPN1-210ENST00000527699 G2E3Q7L622 706 aa12.75□□□□□ -0.37
CAPN1-210ENST00000527699 CCDC191Q8NCU4 936 aa12.75□□□□□ -0.37
CAPN1-210ENST00000527699 PODXL2Q9NZ53 605 aa12.75□□□□□ -0.37
CAPN1-210ENST00000527699 SALL2Q9Y467 1007 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-210ENST00000527699 PI4KAP2A4QPH2 592 aa12.74□□□□□ -0.37
CAPN1-210ENST00000527699 DDX58O95786 925 aaKnown RBP12.74□□□□□ -0.37
CAPN1-210ENST00000527699 IGKV5-2P06315 115 aa12.74□□□□□ -0.37
CAPN1-210ENST00000527699 CTSWP56202 376 aa12.74□□□□□ -0.37
CAPN1-210ENST00000527699 PRKG1Q13976 671 aa12.74□□□□□ -0.37
CAPN1-210ENST00000527699 CCDC30Q5VVM6 783 aa12.74□□□□□ -0.37
CAPN1-210ENST00000527699 PI4KAP1Q8N8J0 262 aa12.74□□□□□ -0.37
CAPN1-210ENST00000527699 HTATIP2Q9BUP3 242 aa12.74□□□□□ -0.37
CAPN1-210ENST00000527699 CFHR5Q9BXR6 569 aa12.74□□□□□ -0.37
CAPN1-210ENST00000527699 GREM2Q9H772 168 aa12.74□□□□□ -0.37
CAPN1-210ENST00000527699 MYOZ2Q9NPC6 264 aa12.74□□□□□ -0.37
CAPN1-210ENST00000527699 XDHP47989 1333 aa12.73□□□□□ -0.37
CAPN1-210ENST00000527699 USP17L3A6NCW0 530 aa12.73□□□□□ -0.37
CAPN1-210ENST00000527699 USP17L4A6NCW7 530 aa12.73□□□□□ -0.37
CAPN1-210ENST00000527699 ATP2B4P23634 1241 aa12.73□□□□□ -0.37
CAPN1-210ENST00000527699 NBPF9Q3BBW0 867 aa12.73□□□□□ -0.37
CAPN1-210ENST00000527699 USP17L1Q7RTZ2 530 aa12.73□□□□□ -0.37
CAPN1-210ENST00000527699 LAMA3Q16787 3333 aa12.73□□□□□ -0.37
CAPN1-210ENST00000527699 ZNF609O15014 1411 aa12.72□□□□□ -0.37
CAPN1-210ENST00000527699 USP17L8P0C7I0 530 aa12.72□□□□□ -0.37
CAPN1-210ENST00000527699 KLRK1P26718 216 aa12.72□□□□□ -0.37
CAPN1-210ENST00000527699 CALD1Q05682 793 aaKnown RBP12.72□□□□□ -0.37
CAPN1-210ENST00000527699 UBE3BQ7Z3V4 1068 aa12.72□□□□□ -0.37
CAPN1-210ENST00000527699 TXNRD3Q86VQ6 643 aa12.72□□□□□ -0.37
CAPN1-210ENST00000527699 TTLL11Q8NHH1 800 aa12.72□□□□□ -0.37
CAPN1-210ENST00000527699 MINPP1Q9UNW1 487 aa12.72□□□□□ -0.37
CAPN1-210ENST00000527699 VCANP13611 3396 aa12.72□□□□□ -0.37
CAPN1-210ENST00000527699 SPEF2Q9C093 1822 aa12.72□□□□□ -0.37
CAPN1-210ENST00000527699 SASH1O94885 1247 aa12.71□□□□□ -0.37
CAPN1-210ENST00000527699 HSP90B1P14625 803 aaKnown RBP12.71□□□□□ -0.37
CAPN1-210ENST00000527699 ZNF280AP59817 542 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-210ENST00000527699 KSR2Q6VAB6 950 aa12.71□□□□□ -0.37
CAPN1-210ENST00000527699 AGBL3Q8NEM8 1001 aa12.71□□□□□ -0.37
CAPN1-210ENST00000527699 CDC5LQ99459 802 aaKnown RBP12.71□□□□□ -0.37
CAPN1-210ENST00000527699 MTMR10Q9NXD2 777 aa12.71□□□□□ -0.37
CAPN1-210ENST00000527699 STAP2Q9UGK3 403 aa12.71□□□□□ -0.37
CAPN1-210ENST00000527699 FZD1Q9UP38 647 aa12.71□□□□□ -0.37
CAPN1-210ENST00000527699 NEURL1BA8MQ27 555 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms