RNA–Protein interactions for RNA: ENST00000527551.1

USH1C-206, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 371 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-206ENST00000527551 IFIT1P09914 478 aaKnown RBP15.83■□□□□ 0.12
USH1C-206ENST00000527551 ZNF784Q8NCA9 323 aaPredicted RBP15.83■□□□□ 0.12
USH1C-206ENST00000527551 LPIN2Q92539 896 aa15.83■□□□□ 0.12
USH1C-206ENST00000527551 L3MBTL3Q96JM7 780 aaPredicted RBP15.83■□□□□ 0.12
USH1C-206ENST00000527551 GPR101Q96P66 508 aaPredicted RBP15.83■□□□□ 0.12
USH1C-206ENST00000527551 DBNDD1Q9H9R9 158 aa15.83■□□□□ 0.12
USH1C-206ENST00000527551 GPBP1L1Q9HC44 474 aaPredicted RBP15.83■□□□□ 0.12
USH1C-206ENST00000527551 AKAP2Q9Y2D5 859 aa15.83■□□□□ 0.12
USH1C-206ENST00000527551 ZNF609O15014 1411 aa15.83■□□□□ 0.12
USH1C-206ENST00000527551 SCN9AQ15858 1988 aa15.82■□□□□ 0.12
USH1C-206ENST00000527551 SURF6O75683 361 aaKnown RBP15.82■□□□□ 0.12
USH1C-206ENST00000527551 SLC5A1P13866 664 aa15.82■□□□□ 0.12
USH1C-206ENST00000527551 FGFR2P21802 821 aa15.82■□□□□ 0.12
USH1C-206ENST00000527551 CXCL9Q07325 125 aa15.82■□□□□ 0.12
USH1C-206ENST00000527551 CIAPIN1Q6FI81 312 aa15.82■□□□□ 0.12
USH1C-206ENST00000527551 ERC1Q8IUD2 1116 aa15.82■□□□□ 0.12
USH1C-206ENST00000527551 GPR108Q9NPR9 543 aa15.82■□□□□ 0.12
USH1C-206ENST00000527551 ZNF541Q9H0D2 1346 aa15.82■□□□□ 0.12
USH1C-206ENST00000527551 IQCA1LA6NCM1 817 aa15.81■□□□□ 0.12
USH1C-206ENST00000527551 WTIPA6NIX2 430 aaPredicted RBP15.81■□□□□ 0.12
USH1C-206ENST00000527551 YDJCA8MPS7 323 aa15.81■□□□□ 0.12
USH1C-206ENST00000527551 ZNF646O15015 1829 aaPredicted RBP15.81■□□□□ 0.12
USH1C-206ENST00000527551 ZBTB22O15209 634 aa15.81■□□□□ 0.12
USH1C-206ENST00000527551 ATP2B3Q16720 1220 aa15.81■□□□□ 0.12
USH1C-206ENST00000527551 DOK7Q18PE1 504 aa15.81■□□□□ 0.12
USH1C-206ENST00000527551 CAVIN4Q5BKX8 364 aa15.81■□□□□ 0.12
USH1C-206ENST00000527551 TXNRD3Q86VQ6 643 aa15.81■□□□□ 0.12
USH1C-206ENST00000527551 CRBNQ96SW2 442 aa15.81■□□□□ 0.12
USH1C-206ENST00000527551 MYH13Q9UKX3 1938 aa15.81■□□□□ 0.12
USH1C-206ENST00000527551 DDNO94850 711 aaPredicted RBP15.8■□□□□ 0.12
USH1C-206ENST00000527551 IL1R1P14778 569 aa15.8■□□□□ 0.12
USH1C-206ENST00000527551 RPS12P25398 132 aaKnown RBP15.8■□□□□ 0.12
USH1C-206ENST00000527551 HIBADHP31937 336 aaKnown RBP15.8■□□□□ 0.12
USH1C-206ENST00000527551 OS9Q13438 667 aaPredicted RBP15.8■□□□□ 0.12
USH1C-206ENST00000527551 SIRT2Q8IXJ6 389 aa15.8■□□□□ 0.12
USH1C-206ENST00000527551 CD209Q9NNX6 404 aa15.8■□□□□ 0.12
USH1C-206ENST00000527551 MYO3BQ8WXR4 1341 aa15.79■□□□□ 0.12
USH1C-206ENST00000527551 USP17L3A6NCW0 530 aa15.79■□□□□ 0.12
USH1C-206ENST00000527551 USP17L4A6NCW7 530 aa15.79■□□□□ 0.12
USH1C-206ENST00000527551 SNAP23O00161 211 aa15.79■□□□□ 0.12
USH1C-206ENST00000527551 VIL1P09327 827 aaKnown RBP15.79■□□□□ 0.12
USH1C-206ENST00000527551 VEGFAP15692 232 aaPredicted RBP15.79■□□□□ 0.12
USH1C-206ENST00000527551 KLRK1P26718 216 aa15.79■□□□□ 0.12
USH1C-206ENST00000527551 MMP14P50281 582 aa15.79■□□□□ 0.12
USH1C-206ENST00000527551 TFCP2Q12800 502 aa15.79■□□□□ 0.12
USH1C-206ENST00000527551 STRIP1Q5VSL9 837 aa15.79■□□□□ 0.12
USH1C-206ENST00000527551 USP17L1Q7RTZ2 530 aa15.79■□□□□ 0.12
USH1C-206ENST00000527551 FAM84BQ96KN1 310 aaPredicted RBP15.79■□□□□ 0.12
USH1C-206ENST00000527551 GJA3Q9Y6H8 435 aa15.79■□□□□ 0.12
USH1C-206ENST00000527551 RAB11FIP3O75154 756 aa15.78■□□□□ 0.12
USH1C-206ENST00000527551 RAD17O75943 681 aa15.78■□□□□ 0.12
USH1C-206ENST00000527551 SASH1O94885 1247 aa15.78■□□□□ 0.12
USH1C-206ENST00000527551 FBXO33Q7Z6M2 555 aa15.78■□□□□ 0.12
USH1C-206ENST00000527551 VPS37DQ86XT2 251 aa15.78■□□□□ 0.12
USH1C-206ENST00000527551 ZNF526Q8TF50 670 aaPredicted RBP15.78■□□□□ 0.12
USH1C-206ENST00000527551 DPF2Q92785 391 aa15.78■□□□□ 0.12
USH1C-206ENST00000527551 PSMD14O00487 310 aa15.77■□□□□ 0.12
USH1C-206ENST00000527551 LMOD1P29536 600 aaPredicted RBP15.77■□□□□ 0.12
USH1C-206ENST00000527551 FKBP1AP62942 108 aaKnown RBP15.77■□□□□ 0.12
USH1C-206ENST00000527551 AGBL3Q8NEM8 1001 aa15.77■□□□□ 0.12
USH1C-206ENST00000527551 TDRD7Q8NHU6 1098 aaKnown RBP15.77■□□□□ 0.12
USH1C-206ENST00000527551 GNL3LQ9NVN8 582 aaKnown RBP15.77■□□□□ 0.12
USH1C-206ENST00000527551 FAM205AQ6ZU69 1335 aa15.76■□□□□ 0.11
USH1C-206ENST00000527551 A0A1B0GUL7 405 aa15.76■□□□□ 0.11
USH1C-206ENST00000527551 SEMA3EO15041 775 aa15.76■□□□□ 0.11
USH1C-206ENST00000527551 CENPBP07199 599 aaPredicted RBP15.76■□□□□ 0.11
USH1C-206ENST00000527551 GYG1P46976 350 aa15.76■□□□□ 0.11
USH1C-206ENST00000527551 TTLL5Q6EMB2 1281 aa15.76■□□□□ 0.11
USH1C-206ENST00000527551 RSBN1LQ6PCB5 846 aaPredicted RBP15.76■□□□□ 0.11
USH1C-206ENST00000527551 KIF1BPQ96EK5 621 aa15.76■□□□□ 0.11
USH1C-206ENST00000527551 RRAGCQ9HB90 399 aa15.76■□□□□ 0.11
USH1C-206ENST00000527551 HACL1Q9UJ83 578 aa15.76■□□□□ 0.11
USH1C-206ENST00000527551 SCNN1DP51172 638 aa15.75■□□□□ 0.11
USH1C-206ENST00000527551 DACT2Q5SW24 774 aa15.75■□□□□ 0.11
USH1C-206ENST00000527551 PNMA8AQ86V59 439 aaPredicted RBP15.75■□□□□ 0.11
USH1C-206ENST00000527551 NMRK2Q9NPI5 230 aa15.75■□□□□ 0.11
USH1C-206ENST00000527551 GPRC5DQ9NZD1 345 aa15.75■□□□□ 0.11
USH1C-206ENST00000527551 EXOC6BQ9Y2D4 811 aa15.75■□□□□ 0.11
USH1C-206ENST00000527551 PCDHB15Q9Y5E8 787 aa15.75■□□□□ 0.11
USH1C-206ENST00000527551 POTECB2RU33 542 aa15.74■□□□□ 0.11
USH1C-206ENST00000527551 GMPSP49915 693 aaPredicted RBP15.74■□□□□ 0.11
USH1C-206ENST00000527551 TIMM10P62072 90 aa15.74■□□□□ 0.11
USH1C-206ENST00000527551 GTF2IP78347 998 aa15.74■□□□□ 0.11
USH1C-206ENST00000527551 TNNI3KQ59H18 835 aa15.74■□□□□ 0.11
USH1C-206ENST00000527551 C16orf71Q8IYS4 520 aaPredicted RBP15.74■□□□□ 0.11
USH1C-206ENST00000527551 TBC1D22AQ8WUA7 517 aa15.74■□□□□ 0.11
USH1C-206ENST00000527551 DCTPP1Q9H773 170 aa15.74■□□□□ 0.11
USH1C-206ENST00000527551 KCNQ5Q9NR82 932 aa15.74■□□□□ 0.11
USH1C-206ENST00000527551 FPGT-TNNI3KV9GXZ4 949 aa15.74■□□□□ 0.11
USH1C-206ENST00000527551 PDS5AQ29RF7 1337 aaKnown RBP15.73■□□□□ 0.11
USH1C-206ENST00000527551 KIF3CO14782 793 aa15.73■□□□□ 0.11
USH1C-206ENST00000527551 FRAT2O75474 233 aaPredicted RBP15.73■□□□□ 0.11
USH1C-206ENST00000527551 BCAMP50895 628 aa15.73■□□□□ 0.11
USH1C-206ENST00000527551 HDAC1Q13547 482 aaPredicted RBP15.73■□□□□ 0.11
USH1C-206ENST00000527551 RHPN1Q8TCX5 695 aa15.73■□□□□ 0.11
USH1C-206ENST00000527551 XAGE2Q96GT9 111 aa15.73■□□□□ 0.11
USH1C-206ENST00000527551 NEUROD6Q96NK8 337 aa15.73■□□□□ 0.11
USH1C-206ENST00000527551 GMLQ99445 158 aa15.73■□□□□ 0.11
USH1C-206ENST00000527551 TAF1DQ9H5J8 278 aaPredicted RBP15.73■□□□□ 0.11
USH1C-206ENST00000527551 ADARB2Q9NS39 739 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms