RNA–Protein interactions for RNA: ENST00000526480.1

CSTF3-207, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-207ENST00000526480 SLC6A16Q9GZN6 736 aa8.77□□□□□ -1.01
CSTF3-207ENST00000526480 CARMIL3Q8ND23 1372 aa8.76□□□□□ -1.01
CSTF3-207ENST00000526480 HMGB2P26583 209 aaKnown RBP8.76□□□□□ -1.01
CSTF3-207ENST00000526480 MAP2K2P36507 400 aa8.76□□□□□ -1.01
CSTF3-207ENST00000526480 CST9Q5W186 159 aa8.76□□□□□ -1.01
CSTF3-207ENST00000526480 NME9Q86XW9 330 aa8.76□□□□□ -1.01
CSTF3-207ENST00000526480 PNMA1Q8ND90 353 aa8.76□□□□□ -1.01
CSTF3-207ENST00000526480 SLC4A9Q96Q91 983 aa8.76□□□□□ -1.01
CSTF3-207ENST00000526480 MAP10Q9P2G4 905 aa8.76□□□□□ -1.01
CSTF3-207ENST00000526480 ASAP1Q9ULH1 1129 aa8.76□□□□□ -1.01
CSTF3-207ENST00000526480 RTCBQ9Y3I0 505 aaKnown RBP8.76□□□□□ -1.01
CSTF3-207ENST00000526480 ZNF541Q9H0D2 1346 aa8.76□□□□□ -1.01
CSTF3-207ENST00000526480 CD163L1Q9NR16 1453 aa8.76□□□□□ -1.01
CSTF3-207ENST00000526480 EYSQ5T1H1 3165 aa8.75□□□□□ -1.01
CSTF3-207ENST00000526480 IQCA1LA6NCM1 817 aa8.75□□□□□ -1.01
CSTF3-207ENST00000526480 POLRMTO00411 1230 aaKnown RBP8.75□□□□□ -1.01
CSTF3-207ENST00000526480 TRAF5O00463 557 aa8.75□□□□□ -1.01
CSTF3-207ENST00000526480 CYP27B1O15528 508 aa8.75□□□□□ -1.01
CSTF3-207ENST00000526480 S1PR4O95977 384 aa8.75□□□□□ -1.01
CSTF3-207ENST00000526480 CCNYL3P0C7X3 344 aa8.75□□□□□ -1.01
CSTF3-207ENST00000526480 MPNDQ8N594 471 aa8.75□□□□□ -1.01
CSTF3-207ENST00000526480 GLMNQ92990 594 aa8.75□□□□□ -1.01
CSTF3-207ENST00000526480 CCDC97Q96F63 343 aaPredicted RBP8.75□□□□□ -1.01
CSTF3-207ENST00000526480 SERPINA10Q9UK55 444 aa8.75□□□□□ -1.01
CSTF3-207ENST00000526480 TLL2Q9Y6L7 1015 aa8.75□□□□□ -1.01
CSTF3-207ENST00000526480 EPHX2P34913 555 aa8.74□□□□□ -1.01
CSTF3-207ENST00000526480 VAC14Q08AM6 782 aa8.74□□□□□ -1.01
CSTF3-207ENST00000526480 TTLL6Q8N841 843 aa8.74□□□□□ -1.01
CSTF3-207ENST00000526480 IP6K1Q92551 441 aa8.74□□□□□ -1.01
CSTF3-207ENST00000526480 ZNF775Q96BV0 537 aaPredicted RBP8.74□□□□□ -1.01
CSTF3-207ENST00000526480 NUDT12Q9BQG2 462 aa8.74□□□□□ -1.01
CSTF3-207ENST00000526480 ANKRD26Q9UPS8 1709 aa8.74□□□□□ -1.01
CSTF3-207ENST00000526480 KTN1Q86UP2 1357 aaKnown RBP8.73□□□□□ -1.01
CSTF3-207ENST00000526480 RFC4P35249 363 aa8.73□□□□□ -1.01
CSTF3-207ENST00000526480 ZNF787Q6DD87 383 aa8.73□□□□□ -1.01
CSTF3-207ENST00000526480 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.73□□□□□ -1.01
CSTF3-207ENST00000526480 FKBPLQ9UIM3 349 aa8.73□□□□□ -1.01
CSTF3-207ENST00000526480 POLR2AP24928 1970 aaKnown RBP8.73□□□□□ -1.01
CSTF3-207ENST00000526480 PRUNE2Q8WUY3 3088 aa8.73□□□□□ -1.01
CSTF3-207ENST00000526480 RNF123Q5XPI4 1314 aa8.73□□□□□ -1.01
CSTF3-207ENST00000526480 PCDH11XQ9BZA7 1347 aa8.73□□□□□ -1.01
CSTF3-207ENST00000526480 PCDH11YQ9BZA8 1340 aa8.73□□□□□ -1.01
CSTF3-207ENST00000526480 LAMA2P24043 3122 aaKnown RBP8.72□□□□□ -1.01
CSTF3-207ENST00000526480 PPEF1O14829 653 aaPredicted RBP8.72□□□□□ -1.01
CSTF3-207ENST00000526480 C21orf2O43822 256 aa8.72□□□□□ -1.01
CSTF3-207ENST00000526480 CTHP32929 405 aa8.72□□□□□ -1.01
CSTF3-207ENST00000526480 NBPF6Q5VWK0 638 aa8.72□□□□□ -1.01
CSTF3-207ENST00000526480 DCAF11Q8TEB1 546 aa8.72□□□□□ -1.01
CSTF3-207ENST00000526480 CALR3Q96L12 384 aaKnown RBP8.72□□□□□ -1.01
CSTF3-207ENST00000526480 NBPF4Q96M43 638 aa8.72□□□□□ -1.01
CSTF3-207ENST00000526480 SIN3AQ96ST3 1273 aa8.72□□□□□ -1.01
CSTF3-207ENST00000526480 EVA1BQ9NVM1 165 aa8.72□□□□□ -1.01
CSTF3-207ENST00000526480 HACL1Q9UJ83 578 aa8.72□□□□□ -1.01
CSTF3-207ENST00000526480 USP42Q9H9J4 1324 aaKnown RBP8.72□□□□□ -1.01
CSTF3-207ENST00000526480 SMG6Q86US8 1419 aaKnown RBP8.71□□□□□ -1.01
CSTF3-207ENST00000526480 RNF223E7ERA6 249 aa8.71□□□□□ -1.02
CSTF3-207ENST00000526480 GFRA3O60609 400 aa8.71□□□□□ -1.02
CSTF3-207ENST00000526480 TM4SF1P30408 202 aa8.71□□□□□ -1.02
CSTF3-207ENST00000526480 KCNH2Q12809 1159 aa8.71□□□□□ -1.02
CSTF3-207ENST00000526480 ADAMTS19Q8TE59 1207 aa8.71□□□□□ -1.02
CSTF3-207ENST00000526480 CENPJQ9HC77 1338 aaPredicted RBP8.71□□□□□ -1.02
CSTF3-207ENST00000526480 LTBP3Q9NS15 1303 aa8.71□□□□□ -1.02
CSTF3-207ENST00000526480 INSRP06213 1382 aa8.71□□□□□ -1.02
CSTF3-207ENST00000526480 SBNO2Q9Y2G9 1366 aa8.71□□□□□ -1.02
CSTF3-207ENST00000526480 COL4A5P29400 1685 aa8.7□□□□□ -1.02
CSTF3-207ENST00000526480 RPS6KA4O75676 772 aa8.7□□□□□ -1.02
CSTF3-207ENST00000526480 CTU1Q7Z7A3 348 aaKnown RBP8.7□□□□□ -1.02
CSTF3-207ENST00000526480 SAPCD2Q86UD0 394 aa8.7□□□□□ -1.02
CSTF3-207ENST00000526480 C2CD5Q86YS7 1000 aa8.7□□□□□ -1.02
CSTF3-207ENST00000526480 CNTNAP4Q9C0A0 1308 aa8.7□□□□□ -1.02
CSTF3-207ENST00000526480 FBLN1P23142 703 aa8.69□□□□□ -1.02
CSTF3-207ENST00000526480 HOXC9P31274 260 aa8.69□□□□□ -1.02
CSTF3-207ENST00000526480 SOX11P35716 441 aa8.69□□□□□ -1.02
CSTF3-207ENST00000526480 RC3H1Q5TC82 1133 aaKnown RBP8.69□□□□□ -1.02
CSTF3-207ENST00000526480 HDGFL1Q5TGJ6 251 aa8.69□□□□□ -1.02
CSTF3-207ENST00000526480 ANKLE1Q8NAG6 615 aa8.69□□□□□ -1.02
CSTF3-207ENST00000526480 COL25A1Q9BXS0 654 aaPredicted RBP8.69□□□□□ -1.02
CSTF3-207ENST00000526480 TAOK3Q9H2K8 898 aa8.69□□□□□ -1.02
CSTF3-207ENST00000526480 ATG3Q9NT62 314 aa8.69□□□□□ -1.02
CSTF3-207ENST00000526480 ZBBXA8MT70 800 aa8.68□□□□□ -1.02
CSTF3-207ENST00000526480 NR1H3Q13133 447 aa8.68□□□□□ -1.02
CSTF3-207ENST00000526480 PNMA8AQ86V59 439 aaPredicted RBP8.68□□□□□ -1.02
CSTF3-207ENST00000526480 ARMC2Q8NEN0 867 aa8.68□□□□□ -1.02
CSTF3-207ENST00000526480 ALG2Q9H553 416 aa8.68□□□□□ -1.02
CSTF3-207ENST00000526480 CGNL1Q0VF96 1302 aa8.68□□□□□ -1.02
CSTF3-207ENST00000526480 MAP3K19Q56UN5 1328 aa8.68□□□□□ -1.02
CSTF3-207ENST00000526480 MUC3AQ02505 3323 aa8.67□□□□□ -1.02
CSTF3-207ENST00000526480 FBXO45P0C2W1 286 aa8.67□□□□□ -1.02
CSTF3-207ENST00000526480 RAPGEF4Q8WZA2 1011 aa8.67□□□□□ -1.02
CSTF3-207ENST00000526480 GPKOWQ92917 476 aaPredicted RBP eCLIP8.67□□□□□ -1.02
CSTF3-207ENST00000526480 PRKD2Q9BZL6 878 aa8.67□□□□□ -1.02
CSTF3-207ENST00000526480 TATP17735 454 aaPredicted RBP8.66□□□□□ -1.02
CSTF3-207ENST00000526480 CCDC24Q8N4L8 307 aa8.66□□□□□ -1.02
CSTF3-207ENST00000526480 UNC93B1Q9H1C4 597 aa8.66□□□□□ -1.02
CSTF3-207ENST00000526480 TMOD3Q9NYL9 352 aa8.66□□□□□ -1.02
CSTF3-207ENST00000526480 FCF1Q9Y324 198 aaKnown RBP8.66□□□□□ -1.02
CSTF3-207ENST00000526480 SCN7AQ01118 1682 aa8.65□□□□□ -1.02
CSTF3-207ENST00000526480 H0YIN7 160 aa8.65□□□□□ -1.02
CSTF3-207ENST00000526480 TRPA1O75762 1119 aa8.65□□□□□ -1.02
CSTF3-207ENST00000526480 CELF2O95319 508 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms