RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 CAPNS2Q96L46 248 aa14.71□□□□□ -0.05
HIF3A-209ENST00000525854 ZNF408Q9H9D4 720 aa14.71□□□□□ -0.05
HIF3A-209ENST00000525854 PTPRCP08575 1304 aa14.7□□□□□ -0.06
HIF3A-209ENST00000525854 MYO3BQ8WXR4 1341 aa14.7□□□□□ -0.06
HIF3A-209ENST00000525854 TAF7LQ5H9L4 462 aa14.7□□□□□ -0.06
HIF3A-209ENST00000525854 STRIP1Q5VSL9 837 aa14.7□□□□□ -0.06
HIF3A-209ENST00000525854 SAPCD2Q86UD0 394 aa14.7□□□□□ -0.06
HIF3A-209ENST00000525854 SULF1Q8IWU6 871 aa14.7□□□□□ -0.06
HIF3A-209ENST00000525854 HHIPL1Q96JK4 782 aa14.7□□□□□ -0.06
HIF3A-209ENST00000525854 GMLQ99445 158 aa14.7□□□□□ -0.06
HIF3A-209ENST00000525854 WBP1LQ9NX94 342 aa14.7□□□□□ -0.06
HIF3A-209ENST00000525854 SCN9AQ15858 1988 aa14.69□□□□□ -0.06
HIF3A-209ENST00000525854 PCNTO95613 3336 aa14.69□□□□□ -0.06
HIF3A-209ENST00000525854 CTCFP49711 727 aaPredicted RBP14.69□□□□□ -0.06
HIF3A-209ENST00000525854 MMP14P50281 582 aa14.69□□□□□ -0.06
HIF3A-209ENST00000525854 OGFOD1Q8N543 542 aa14.69□□□□□ -0.06
HIF3A-209ENST00000525854 FBXW7Q969H0 707 aa14.69□□□□□ -0.06
HIF3A-209ENST00000525854 MYOZ2Q9NPC6 264 aa14.69□□□□□ -0.06
HIF3A-209ENST00000525854 GGA3Q9NZ52 723 aa14.69□□□□□ -0.06
HIF3A-209ENST00000525854 TRPM7Q96QT4 1865 aa14.68□□□□□ -0.06
HIF3A-209ENST00000525854 FOXN1O15353 648 aa14.68□□□□□ -0.06
HIF3A-209ENST00000525854 GRM1Q13255 1194 aa14.68□□□□□ -0.06
HIF3A-209ENST00000525854 SCARF1Q14162 830 aa14.68□□□□□ -0.06
HIF3A-209ENST00000525854 ALDH1L2Q3SY69 923 aa14.68□□□□□ -0.06
HIF3A-209ENST00000525854 EPHA10Q5JZY3 1008 aa14.68□□□□□ -0.06
HIF3A-209ENST00000525854 DACT2Q5SW24 774 aa14.68□□□□□ -0.06
HIF3A-209ENST00000525854 CYP4F22Q6NT55 531 aa14.68□□□□□ -0.06
HIF3A-209ENST00000525854 LDHAL6AQ6ZMR3 332 aa14.68□□□□□ -0.06
HIF3A-209ENST00000525854 TXNRD3Q86VQ6 643 aa14.68□□□□□ -0.06
HIF3A-209ENST00000525854 TNS4Q8IZW8 715 aa14.68□□□□□ -0.06
HIF3A-209ENST00000525854 SSH1Q8WYL5 1049 aa14.68□□□□□ -0.06
HIF3A-209ENST00000525854 CNNM1Q9NRU3 951 aa14.68□□□□□ -0.06
HIF3A-209ENST00000525854 ADM5C9JUS6 153 aa14.67□□□□□ -0.06
HIF3A-209ENST00000525854 CT47B1P0C2W7 299 aaPredicted RBP14.67□□□□□ -0.06
HIF3A-209ENST00000525854 MAP2K2P36507 400 aa14.67□□□□□ -0.06
HIF3A-209ENST00000525854 TTLL5Q6EMB2 1281 aa14.67□□□□□ -0.06
HIF3A-209ENST00000525854 C15orf52Q6ZUT6 534 aaKnown RBP14.67□□□□□ -0.06
HIF3A-209ENST00000525854 BEGAINQ9BUH8 593 aa14.67□□□□□ -0.06
HIF3A-209ENST00000525854 UTYO14607 1347 aa14.66□□□□□ -0.06
HIF3A-209ENST00000525854 SPEF2Q9C093 1822 aa14.66□□□□□ -0.06
HIF3A-209ENST00000525854 TAF5LO75529 589 aa14.66□□□□□ -0.06
HIF3A-209ENST00000525854 NBPF7P0C2Y1 421 aaPredicted RBP14.66□□□□□ -0.06
HIF3A-209ENST00000525854 KLRK1P26718 216 aa14.66□□□□□ -0.06
HIF3A-209ENST00000525854 ANGEL2Q5VTE6 544 aaKnown RBP14.66□□□□□ -0.06
HIF3A-209ENST00000525854 ZNF804AQ7Z570 1209 aa14.66□□□□□ -0.06
HIF3A-209ENST00000525854 C2orf69Q8N8R5 385 aa14.66□□□□□ -0.06
HIF3A-209ENST00000525854 HELBQ8NG08 1087 aaPredicted RBP14.66□□□□□ -0.06
HIF3A-209ENST00000525854 CDCA7LQ96GN5 454 aa14.66□□□□□ -0.06
HIF3A-209ENST00000525854 SUCLG2Q96I99 432 aa14.66□□□□□ -0.06
HIF3A-209ENST00000525854 GBA2Q9HCG7 927 aaPredicted RBP14.66□□□□□ -0.06
HIF3A-209ENST00000525854 PRDM10Q9NQV6 1147 aa14.66□□□□□ -0.06
HIF3A-209ENST00000525854 HDAC9Q9UKV0 1011 aa14.66□□□□□ -0.06
HIF3A-209ENST00000525854 PITPNM2Q9BZ72 1349 aa14.66□□□□□ -0.06
HIF3A-209ENST00000525854 HUNKP57058 714 aa14.65□□□□□ -0.06
HIF3A-209ENST00000525854 TRMT2AQ8IZ69 625 aaKnown RBP14.65□□□□□ -0.06
HIF3A-209ENST00000525854 ZNF594Q96JF6 807 aaPredicted RBP14.65□□□□□ -0.06
HIF3A-209ENST00000525854 CD209Q9NNX6 404 aa14.65□□□□□ -0.06
HIF3A-209ENST00000525854 SMC4Q9NTJ3 1288 aa14.65□□□□□ -0.06
HIF3A-209ENST00000525854 ASTN2O75129 1339 aaPredicted RBP14.65□□□□□ -0.06
HIF3A-209ENST00000525854 GTF2IP78347 998 aa14.64□□□□□ -0.07
HIF3A-209ENST00000525854 DLK2Q6UY11 383 aa14.64□□□□□ -0.07
HIF3A-209ENST00000525854 KAZALD1Q96I82 304 aa14.64□□□□□ -0.07
HIF3A-209ENST00000525854 MXD3Q9BW11 206 aa14.64□□□□□ -0.07
HIF3A-209ENST00000525854 PSME4Q14997 1843 aa14.64□□□□□ -0.07
HIF3A-209ENST00000525854 SNAP23O00161 211 aa14.63□□□□□ -0.07
HIF3A-209ENST00000525854 PLIN1O60240 522 aa14.63□□□□□ -0.07
HIF3A-209ENST00000525854 NOGQ13253 232 aa14.63□□□□□ -0.07
HIF3A-209ENST00000525854 RABL6Q3YEC7 729 aaPredicted RBP14.63□□□□□ -0.07
HIF3A-209ENST00000525854 CDCA5Q96FF9 252 aa14.63□□□□□ -0.07
HIF3A-209ENST00000525854 BICC1Q9H694 974 aaKnown RBP14.63□□□□□ -0.07
HIF3A-209ENST00000525854 IRS2Q9Y4H2 1338 aa14.63□□□□□ -0.07
HIF3A-209ENST00000525854 CA12O43570 354 aa14.62□□□□□ -0.07
HIF3A-209ENST00000525854 AOC2O75106 756 aa14.62□□□□□ -0.07
HIF3A-209ENST00000525854 IL1R1P14778 569 aa14.62□□□□□ -0.07
HIF3A-209ENST00000525854 LBX1P52954 281 aa14.62□□□□□ -0.07
HIF3A-209ENST00000525854 BRPF1P55201 1214 aaPredicted RBP14.62□□□□□ -0.07
HIF3A-209ENST00000525854 FKBP1BP68106 108 aa14.62□□□□□ -0.07
HIF3A-209ENST00000525854 UBE4AQ14139 1066 aa14.62□□□□□ -0.07
HIF3A-209ENST00000525854 RGMBQ6NW40 437 aa14.62□□□□□ -0.07
HIF3A-209ENST00000525854 KIAA0825Q8IV33 1275 aa14.62□□□□□ -0.07
HIF3A-209ENST00000525854 CCDC102AQ96A19 550 aa14.62□□□□□ -0.07
HIF3A-209ENST00000525854 THSD7BQ9C0I4 1608 aa14.62□□□□□ -0.07
HIF3A-209ENST00000525854 MROH5Q6ZUA9 1318 aa14.62□□□□□ -0.07
HIF3A-209ENST00000525854 WNT10BO00744 389 aa14.61□□□□□ -0.07
HIF3A-209ENST00000525854 HSPA8P11142 646 aaKnown RBP14.61□□□□□ -0.07
HIF3A-209ENST00000525854 FKBP1AP62942 108 aaKnown RBP14.61□□□□□ -0.07
HIF3A-209ENST00000525854 NBPF9Q3BBW0 867 aa14.61□□□□□ -0.07
HIF3A-209ENST00000525854 ANKRD44Q8N8A2 993 aa14.61□□□□□ -0.07
HIF3A-209ENST00000525854 USP44Q9H0E7 712 aa14.61□□□□□ -0.07
HIF3A-209ENST00000525854 SASH1O94885 1247 aa14.6□□□□□ -0.07
HIF3A-209ENST00000525854 ZNF157P51786 506 aaPredicted RBP14.6□□□□□ -0.07
HIF3A-209ENST00000525854 API5Q9BZZ5 524 aaKnown RBP14.6□□□□□ -0.07
HIF3A-209ENST00000525854 RIPOR2Q9Y4F9 1068 aa14.6□□□□□ -0.07
HIF3A-209ENST00000525854 HIBADHP31937 336 aaKnown RBP14.59□□□□□ -0.07
HIF3A-209ENST00000525854 NF2P35240 595 aa14.59□□□□□ -0.07
HIF3A-209ENST00000525854 DLGAP5Q15398 846 aa14.59□□□□□ -0.07
HIF3A-209ENST00000525854 METTL24Q5JXM2 366 aa14.59□□□□□ -0.07
HIF3A-209ENST00000525854 APOBEC3FQ8IUX4 373 aaKnown RBP14.59□□□□□ -0.07
HIF3A-209ENST00000525854 PUS3Q9BZE2 481 aaKnown RBP14.59□□□□□ -0.07
HIF3A-209ENST00000525854 NOB1Q9ULX3 412 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms