RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 IL17RAQ96F46 866 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 CEP83Q9Y592 693 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 AKAP12Q02952 1782 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 SURF6O75683 361 aaKnown RBP13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 IVLP07476 585 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 PDCP20941 246 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 HOXC9P31274 260 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 CEP57L1Q8IYX8 460 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 EYA1Q99502 592 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 CXorf56Q9H5V9 222 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 STAP2Q9UGK3 403 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 AXIN2Q9Y2T1 843 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 PARP3Q9Y6F1 533 aa13.07□□□□□ -0.32
CLNS1A-204ENST00000525428 JAK2O60674 1132 aa13.06□□□□□ -0.32
CLNS1A-204ENST00000525428 CAVIN2O95810 425 aa13.06□□□□□ -0.32
CLNS1A-204ENST00000525428 PPM1EQ8WY54 764 aa13.06□□□□□ -0.32
CLNS1A-204ENST00000525428 SUGCTQ9HAC7 445 aa13.06□□□□□ -0.32
CLNS1A-204ENST00000525428 FAN1Q9Y2M0 1017 aa13.06□□□□□ -0.32
CLNS1A-204ENST00000525428 NWD1Q149M9 1564 aa13.06□□□□□ -0.32
CLNS1A-204ENST00000525428 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
CLNS1A-204ENST00000525428 NBPF6Q5VWK0 638 aa13.06□□□□□ -0.32
CLNS1A-204ENST00000525428 MICALL1Q8N3F8 863 aa13.06□□□□□ -0.32
CLNS1A-204ENST00000525428 NBPF4Q96M43 638 aa13.06□□□□□ -0.32
CLNS1A-204ENST00000525428 H3BQV1 296 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 KINO60870 393 aaKnown RBP13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 GNG11P61952 73 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 PIP4K2BP78356 416 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 IFFO2Q5TF58 517 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 CCDC30Q5VVM6 783 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 TRIM65Q6PJ69 517 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 GOLPH3LQ9H4A5 285 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 ANO10Q9NW15 660 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 ATP8B1O43520 1251 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 PPP2R3AQ06190 1150 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 ZRSR1Q15695 479 aaKnown RBP13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 CNPY4Q8N129 248 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 CNTROBQ8N137 903 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 OSBPL5Q9H0X9 879 aaPredicted RBP13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 USP31Q70CQ4 1352 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 TPM1P09493 284 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 ZKSCAN1P17029 563 aaPredicted RBP13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 CCDC91Q7Z6B0 441 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 GPR161Q8N6U8 529 aaKnown RBP13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 SDF4Q9BRK5 362 aa13.05□□□□□ -0.32
CLNS1A-204ENST00000525428 LMOD1P29536 600 aaPredicted RBP13.04□□□□□ -0.32
CLNS1A-204ENST00000525428 AXDND1Q5T1B0 1012 aaPredicted RBP13.04□□□□□ -0.32
CLNS1A-204ENST00000525428 CCDC73Q6ZRK6 1079 aa13.04□□□□□ -0.32
CLNS1A-204ENST00000525428 CCDC150Q8NCX0 1101 aa13.04□□□□□ -0.32
CLNS1A-204ENST00000525428 CCDC102AQ96A19 550 aa13.04□□□□□ -0.32
CLNS1A-204ENST00000525428 WDR24Q96S15 920 aa13.04□□□□□ -0.32
CLNS1A-204ENST00000525428 ZSWIM6Q9HCJ5 1215 aa13.04□□□□□ -0.32
CLNS1A-204ENST00000525428 CCT4P50991 539 aaKnown RBP13.04□□□□□ -0.32
CLNS1A-204ENST00000525428 MNAT1P51948 309 aa13.04□□□□□ -0.32
CLNS1A-204ENST00000525428 ATP8B2P98198 1209 aa13.04□□□□□ -0.32
CLNS1A-204ENST00000525428 PIK3C2AO00443 1686 aa13.04□□□□□ -0.32
CLNS1A-204ENST00000525428 PI4K2BQ8TCG2 481 aa13.03□□□□□ -0.32
CLNS1A-204ENST00000525428 BRF1Q92994 677 aa13.03□□□□□ -0.32
CLNS1A-204ENST00000525428 KCND1Q9NSA2 647 aa13.03□□□□□ -0.32
CLNS1A-204ENST00000525428 PHLPP2Q6ZVD8 1323 aa13.03□□□□□ -0.32
CLNS1A-204ENST00000525428 PATL2C9JE40 543 aaKnown RBP13.03□□□□□ -0.32
CLNS1A-204ENST00000525428 DPCR1Q3MIW9 517 aa13.03□□□□□ -0.32
CLNS1A-204ENST00000525428 SRRTQ9BXP5 876 aaKnown RBP13.03□□□□□ -0.32
CLNS1A-204ENST00000525428 BICC1Q9H694 974 aaKnown RBP13.03□□□□□ -0.32
CLNS1A-204ENST00000525428 PSD3Q9NYI0 1048 aa13.03□□□□□ -0.32
CLNS1A-204ENST00000525428 MAP2K2P36507 400 aa13.02□□□□□ -0.32
CLNS1A-204ENST00000525428 APOBRQ0VD83 1088 aa13.02□□□□□ -0.32
CLNS1A-204ENST00000525428 DNAAF4Q8WXU2 420 aa13.02□□□□□ -0.32
CLNS1A-204ENST00000525428 NAT10Q9H0A0 1025 aaKnown RBP13.02□□□□□ -0.32
CLNS1A-204ENST00000525428 SIL1Q9H173 461 aa13.02□□□□□ -0.32
CLNS1A-204ENST00000525428 IMPACTQ9P2X3 320 aa13.02□□□□□ -0.32
CLNS1A-204ENST00000525428 PUF60Q9UHX1 559 aaKnown RBP13.02□□□□□ -0.32
CLNS1A-204ENST00000525428 SUFUQ9UMX1 484 aa13.02□□□□□ -0.32
CLNS1A-204ENST00000525428 AKAP2Q9Y2D5 859 aa13.02□□□□□ -0.32
CLNS1A-204ENST00000525428 TAF6LQ9Y6J9 622 aa13.02□□□□□ -0.32
CLNS1A-204ENST00000525428 NRKQ7Z2Y5 1582 aa13.02□□□□□ -0.32
CLNS1A-204ENST00000525428 ME1P48163 572 aa13.02□□□□□ -0.33
CLNS1A-204ENST00000525428 CORO7P57737 925 aa13.02□□□□□ -0.33
CLNS1A-204ENST00000525428 MCTP2Q6DN12 878 aa13.02□□□□□ -0.33
CLNS1A-204ENST00000525428 IQUBQ8NA54 791 aa13.02□□□□□ -0.33
CLNS1A-204ENST00000525428 ANKRD20A12PQ8NF67 263 aa13.02□□□□□ -0.33
CLNS1A-204ENST00000525428 PLEKHO1Q53GL0 409 aaPredicted RBP13.02□□□□□ -0.33
CLNS1A-204ENST00000525428 SRGAP3O43295 1099 aa13.01□□□□□ -0.33
CLNS1A-204ENST00000525428 ATP1A3P13637 1013 aa13.01□□□□□ -0.33
CLNS1A-204ENST00000525428 LIG3P49916 1009 aa13.01□□□□□ -0.33
CLNS1A-204ENST00000525428 HAP1P54257 671 aaPredicted RBP13.01□□□□□ -0.33
CLNS1A-204ENST00000525428 HSP90AA4PQ58FG1 418 aa13.01□□□□□ -0.33
CLNS1A-204ENST00000525428 LRRC31Q6UY01 552 aa13.01□□□□□ -0.33
CLNS1A-204ENST00000525428 FSIP1Q8NA03 581 aa13.01□□□□□ -0.33
CLNS1A-204ENST00000525428 ZNF622Q969S3 477 aaKnown RBP eCLIP13.01□□□□□ -0.331e-13■■□□□ 12.4
CLNS1A-204ENST00000525428 RABEP2Q9H5N1 569 aa13.01□□□□□ -0.33
CLNS1A-204ENST00000525428 RBM8AQ9Y5S9 174 aaKnown RBP13.01□□□□□ -0.33
CLNS1A-204ENST00000525428 FLT4P35916 1363 aa13.01□□□□□ -0.33
CLNS1A-204ENST00000525428 MMS22LQ6ZRQ5 1243 aa13.01□□□□□ -0.33
CLNS1A-204ENST00000525428 DHX58Q96C10 678 aa13.01□□□□□ -0.33
CLNS1A-204ENST00000525428 ZSCAN16Q9H4T2 348 aaPredicted RBP13.01□□□□□ -0.33
CLNS1A-204ENST00000525428 ANKRD26Q9UPS8 1709 aa13□□□□□ -0.33
CLNS1A-204ENST00000525428 SBNO1A3KN83 1393 aa13□□□□□ -0.33
CLNS1A-204ENST00000525428 TTC41PQ6P2S7 1318 aa13□□□□□ -0.33
CLNS1A-204ENST00000525428 CREB3L3Q68CJ9 461 aa13□□□□□ -0.33
CLNS1A-204ENST00000525428 ARHGEF25Q86VW2 580 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms