RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 C6orf229H3BNL8 230 aa17.28■□□□□ 0.36
UBXN1-205ENST00000525004 IFIT1P09914 478 aaKnown RBP17.28■□□□□ 0.36
UBXN1-205ENST00000525004 PRELPP51888 382 aa17.28■□□□□ 0.36
UBXN1-205ENST00000525004 KIAA2012Q0VF49 1180 aa17.28■□□□□ 0.36
UBXN1-205ENST00000525004 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
UBXN1-205ENST00000525004 FBXO33Q7Z6M2 555 aa17.28■□□□□ 0.36
UBXN1-205ENST00000525004 TXNRD3Q86VQ6 643 aa17.28■□□□□ 0.36
UBXN1-205ENST00000525004 CLASRPQ8N2M8 674 aaKnown RBP17.28■□□□□ 0.36
UBXN1-205ENST00000525004 EYA3Q99504 573 aa17.28■□□□□ 0.36
UBXN1-205ENST00000525004 SLC5A1P13866 664 aa17.27■□□□□ 0.36
UBXN1-205ENST00000525004 ANKRD45Q5TZF3 282 aa17.27■□□□□ 0.36
UBXN1-205ENST00000525004 B4GALNT3Q6L9W6 998 aa17.27■□□□□ 0.36
UBXN1-205ENST00000525004 ARHGAP27Q6ZUM4 889 aa17.27■□□□□ 0.36
UBXN1-205ENST00000525004 FAM84BQ96KN1 310 aaPredicted RBP17.27■□□□□ 0.36
UBXN1-205ENST00000525004 IL1RAPL2Q9NP60 686 aa17.27■□□□□ 0.36
UBXN1-205ENST00000525004 UTRNP46939 3433 aa17.27■□□□□ 0.35
UBXN1-205ENST00000525004 SMARCA5O60264 1052 aaPredicted RBP17.26■□□□□ 0.35
UBXN1-205ENST00000525004 KLRK1P26718 216 aa17.26■□□□□ 0.35
UBXN1-205ENST00000525004 KCNJ4P48050 445 aa17.26■□□□□ 0.35
UBXN1-205ENST00000525004 XAGE2Q96GT9 111 aa17.26■□□□□ 0.35
UBXN1-205ENST00000525004 ZC3H12CQ9C0D7 883 aaKnown RBP17.26■□□□□ 0.35
UBXN1-205ENST00000525004 PSME4Q14997 1843 aa17.26■□□□□ 0.35
UBXN1-205ENST00000525004 AKAP11Q9UKA4 1901 aa17.25■□□□□ 0.35
UBXN1-205ENST00000525004 SALL3Q9BXA9 1300 aa17.25■□□□□ 0.35
UBXN1-205ENST00000525004 APBB1O00213 710 aa17.25■□□□□ 0.35
UBXN1-205ENST00000525004 IARSP41252 1262 aaKnown RBP17.25■□□□□ 0.35
UBXN1-205ENST00000525004 CHD1LQ86WJ1 897 aa17.25■□□□□ 0.35
UBXN1-205ENST00000525004 PELP1Q8IZL8 1130 aaKnown RBP17.25■□□□□ 0.35
UBXN1-205ENST00000525004 GPR101Q96P66 508 aaPredicted RBP17.25■□□□□ 0.35
UBXN1-205ENST00000525004 ZNF277Q9NRM2 450 aaPredicted RBP17.25■□□□□ 0.35
UBXN1-205ENST00000525004 DBNLQ9UJU6 430 aaKnown RBP17.25■□□□□ 0.35
UBXN1-205ENST00000525004 SCN9AQ15858 1988 aa17.24■□□□□ 0.35
UBXN1-205ENST00000525004 COL4A5P29400 1685 aa17.24■□□□□ 0.35
UBXN1-205ENST00000525004 IL1R1P14778 569 aa17.24■□□□□ 0.35
UBXN1-205ENST00000525004 LMNB1P20700 586 aa17.24■□□□□ 0.35
UBXN1-205ENST00000525004 ADORA1P30542 326 aa17.24■□□□□ 0.35
UBXN1-205ENST00000525004 RASSF7Q02833 373 aa17.24■□□□□ 0.35
UBXN1-205ENST00000525004 AACSQ86V21 672 aa17.24■□□□□ 0.35
UBXN1-205ENST00000525004 ZNF512BQ96KM6 892 aaPredicted RBP17.24■□□□□ 0.35
UBXN1-205ENST00000525004 NEUROD6Q96NK8 337 aa17.24■□□□□ 0.35
UBXN1-205ENST00000525004 COA1Q9GZY4 146 aa17.24■□□□□ 0.35
UBXN1-205ENST00000525004 MYH13Q9UKX3 1938 aa17.23■□□□□ 0.35
UBXN1-205ENST00000525004 PPIP5K2O43314 1243 aa17.23■□□□□ 0.35
UBXN1-205ENST00000525004 HIBADHP31937 336 aaKnown RBP17.23■□□□□ 0.35
UBXN1-205ENST00000525004 BCAMP50895 628 aa17.23■□□□□ 0.35
UBXN1-205ENST00000525004 AOC3Q16853 763 aa17.23■□□□□ 0.35
UBXN1-205ENST00000525004 CAVIN4Q5BKX8 364 aa17.23■□□□□ 0.35
UBXN1-205ENST00000525004 PODNQ7Z5L7 613 aa17.23■□□□□ 0.35
UBXN1-205ENST00000525004 TDRD7Q8NHU6 1098 aaKnown RBP17.23■□□□□ 0.35
UBXN1-205ENST00000525004 DBNDD2Q9BQY9 259 aa17.23■□□□□ 0.35
UBXN1-205ENST00000525004 CCDC8Q9H0W5 538 aaPredicted RBP17.23■□□□□ 0.35
UBXN1-205ENST00000525004 CD209Q9NNX6 404 aa17.23■□□□□ 0.35
UBXN1-205ENST00000525004 ZNF646O15015 1829 aaPredicted RBP17.22■□□□□ 0.35
UBXN1-205ENST00000525004 RIMBP2O15034 1052 aa17.22■□□□□ 0.35
UBXN1-205ENST00000525004 GYG1P46976 350 aa17.22■□□□□ 0.35
UBXN1-205ENST00000525004 CCDC102BQ68D86 513 aa17.22■□□□□ 0.35
UBXN1-205ENST00000525004 ZNF804AQ7Z570 1209 aa17.22■□□□□ 0.35
UBXN1-205ENST00000525004 C16orf71Q8IYS4 520 aaPredicted RBP17.22■□□□□ 0.35
UBXN1-205ENST00000525004 TLR7Q9NYK1 1049 aaKnown RBP17.22■□□□□ 0.35
UBXN1-205ENST00000525004 GTF3C3Q9Y5Q9 886 aa17.22■□□□□ 0.35
UBXN1-205ENST00000525004 IFIT2P09913 472 aaKnown RBP17.21■□□□□ 0.35
UBXN1-205ENST00000525004 ARID4AP29374 1257 aaPredicted RBP17.21■□□□□ 0.35
UBXN1-205ENST00000525004 PHKA1P46020 1223 aa17.21■□□□□ 0.35
UBXN1-205ENST00000525004 LARGE2Q8N3Y3 721 aa17.21■□□□□ 0.35
UBXN1-205ENST00000525004 LNPKQ9C0E8 428 aa17.21■□□□□ 0.35
UBXN1-205ENST00000525004 STAP2Q9UGK3 403 aa17.21■□□□□ 0.35
UBXN1-205ENST00000525004 FZD9O00144 591 aa17.2■□□□□ 0.34
UBXN1-205ENST00000525004 CCDC158Q5M9N0 1113 aa17.2■□□□□ 0.34
UBXN1-205ENST00000525004 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.2■□□□□ 0.34
UBXN1-205ENST00000525004 OSBPL3Q9H4L5 887 aa17.2■□□□□ 0.34
UBXN1-205ENST00000525004 ZBTB47Q9UFB7 747 aaPredicted RBP17.2■□□□□ 0.34
UBXN1-205ENST00000525004 DCAF8L1A6NGE4 600 aa17.19■□□□□ 0.34
UBXN1-205ENST00000525004 YDJCA8MPS7 323 aa17.19■□□□□ 0.34
UBXN1-205ENST00000525004 SEMA3EO15041 775 aa17.19■□□□□ 0.34
UBXN1-205ENST00000525004 OTUD7AQ8TE49 926 aaPredicted RBP17.19■□□□□ 0.34
UBXN1-205ENST00000525004 GNL3LQ9NVN8 582 aaKnown RBP17.19■□□□□ 0.34
UBXN1-205ENST00000525004 ZNRF3Q9ULT6 936 aa17.19■□□□□ 0.34
UBXN1-205ENST00000525004 PDS5AQ29RF7 1337 aaKnown RBP17.19■□□□□ 0.34
UBXN1-205ENST00000525004 TTC41PQ6P2S7 1318 aa17.19■□□□□ 0.34
UBXN1-205ENST00000525004 ECE2O60344 883 aa17.18■□□□□ 0.34
UBXN1-205ENST00000525004 UQCRFS1P1P0C7P4 283 aa17.18■□□□□ 0.34
UBXN1-205ENST00000525004 ATP5JP18859 108 aa17.18■□□□□ 0.34
UBXN1-205ENST00000525004 PDE4AP27815 886 aa17.18■□□□□ 0.34
UBXN1-205ENST00000525004 DOK7Q18PE1 504 aa17.18■□□□□ 0.34
UBXN1-205ENST00000525004 PLEKHM2Q8IWE5 1019 aa17.18■□□□□ 0.34
UBXN1-205ENST00000525004 NIM1KQ8IY84 436 aa17.18■□□□□ 0.34
UBXN1-205ENST00000525004 JDP2Q8WYK2 163 aa17.18■□□□□ 0.34
UBXN1-205ENST00000525004 DBNDD1Q9H9R9 158 aa17.18■□□□□ 0.34
UBXN1-205ENST00000525004 ECHDC1Q9NTX5 307 aa17.18■□□□□ 0.34
UBXN1-205ENST00000525004 FAM205AQ6ZU69 1335 aa17.18■□□□□ 0.34
UBXN1-205ENST00000525004 ZC3H4Q9UPT8 1303 aaKnown RBP17.18■□□□□ 0.34
UBXN1-205ENST00000525004 MX1P20591 662 aa17.17■□□□□ 0.34
UBXN1-205ENST00000525004 PDE1AP54750 535 aa17.17■□□□□ 0.34
UBXN1-205ENST00000525004 GORABQ5T7V8 394 aa17.17■□□□□ 0.34
UBXN1-205ENST00000525004 VPS37DQ86XT2 251 aa17.17■□□□□ 0.34
UBXN1-205ENST00000525004 TIAM2Q8IVF5 1701 aa17.16■□□□□ 0.34
UBXN1-205ENST00000525004 MCAMP43121 646 aa17.16■□□□□ 0.34
UBXN1-205ENST00000525004 RASGRF1Q13972 1273 aa17.16■□□□□ 0.34
UBXN1-205ENST00000525004 C9orf131Q5VYM1 1079 aa17.16■□□□□ 0.34
UBXN1-205ENST00000525004 PI4K2BQ8TCG2 481 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms