RNA–Protein interactions for RNA: ENST00000524852.1

CAVIN3-202, Transcript of caveolae associated protein 3, humanhuman

TSL 3

Gene CAVIN3, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-202ENST00000524852 LTBP1Q14766 1721 aa20.26■□□□□ 0.83
CAVIN3-202ENST00000524852 TMEM57Q8N5G2 664 aa20.25■□□□□ 0.83
CAVIN3-202ENST00000524852 FBXW7Q969H0 707 aa20.25■□□□□ 0.83
CAVIN3-202ENST00000524852 PUS3Q9BZE2 481 aaKnown RBP20.25■□□□□ 0.83
CAVIN3-202ENST00000524852 KCNQ5Q9NR82 932 aa20.25■□□□□ 0.83
CAVIN3-202ENST00000524852 WTIPA6NIX2 430 aaPredicted RBP20.24■□□□□ 0.83
CAVIN3-202ENST00000524852 RSBN1LQ6PCB5 846 aaPredicted RBP20.24■□□□□ 0.83
CAVIN3-202ENST00000524852 ITPRIPQ8IWB1 547 aa20.24■□□□□ 0.83
CAVIN3-202ENST00000524852 MICALL2Q8IY33 904 aa20.24■□□□□ 0.83
CAVIN3-202ENST00000524852 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.24■□□□□ 0.83
CAVIN3-202ENST00000524852 ZBTB12Q9Y330 459 aaPredicted RBP20.24■□□□□ 0.83
CAVIN3-202ENST00000524852 MYO3BQ8WXR4 1341 aa20.24■□□□□ 0.83
CAVIN3-202ENST00000524852 SPEF2Q9C093 1822 aa20.23■□□□□ 0.83
CAVIN3-202ENST00000524852 EYA2O00167 538 aa20.23■□□□□ 0.83
CAVIN3-202ENST00000524852 MMP14P50281 582 aa20.23■□□□□ 0.83
CAVIN3-202ENST00000524852 CAVIN4Q5BKX8 364 aa20.23■□□□□ 0.83
CAVIN3-202ENST00000524852 STRIP1Q5VSL9 837 aa20.23■□□□□ 0.83
CAVIN3-202ENST00000524852 TTLL5Q6EMB2 1281 aa20.23■□□□□ 0.83
CAVIN3-202ENST00000524852 VPS37DQ86XT2 251 aa20.23■□□□□ 0.83
CAVIN3-202ENST00000524852 OGFOD1Q8N543 542 aa20.23■□□□□ 0.83
CAVIN3-202ENST00000524852 ZC3H15Q8WU90 426 aaKnown RBP20.23■□□□□ 0.83
CAVIN3-202ENST00000524852 PDE8BO95263 885 aa20.22■□□□□ 0.83
CAVIN3-202ENST00000524852 POTEIP0CG38 1075 aa20.22■□□□□ 0.83
CAVIN3-202ENST00000524852 POTEJP0CG39 1038 aa20.22■□□□□ 0.83
CAVIN3-202ENST00000524852 LRRC24Q50LG9 513 aa20.22■□□□□ 0.83
CAVIN3-202ENST00000524852 TXNRD3Q86VQ6 643 aa20.22■□□□□ 0.83
CAVIN3-202ENST00000524852 CNTROBQ8N137 903 aa20.22■□□□□ 0.83
CAVIN3-202ENST00000524852 CHMP4BQ9H444 224 aaKnown RBP20.22■□□□□ 0.83
CAVIN3-202ENST00000524852 CD209Q9NNX6 404 aa20.22■□□□□ 0.83
CAVIN3-202ENST00000524852 CEP126Q9P2H0 1117 aa20.22■□□□□ 0.83
CAVIN3-202ENST00000524852 SRGAP3O43295 1099 aa20.21■□□□□ 0.83
CAVIN3-202ENST00000524852 CIAO1O76071 339 aa20.21■□□□□ 0.83
CAVIN3-202ENST00000524852 IFIT1P09914 478 aaKnown RBP20.21■□□□□ 0.83
CAVIN3-202ENST00000524852 USP17L8P0C7I0 530 aa20.21■□□□□ 0.83
CAVIN3-202ENST00000524852 PTPN12Q05209 780 aaKnown RBP20.21■□□□□ 0.83
CAVIN3-202ENST00000524852 KLHDC4Q8TBB5 520 aa20.21■□□□□ 0.83
CAVIN3-202ENST00000524852 TNNQ9UQP3 1299 aa20.21■□□□□ 0.83
CAVIN3-202ENST00000524852 HIBADHP31937 336 aaKnown RBP20.2■□□□□ 0.82
CAVIN3-202ENST00000524852 IL15P40933 162 aaPredicted RBP20.2■□□□□ 0.82
CAVIN3-202ENST00000524852 RFX5P48382 616 aaPredicted RBP20.2■□□□□ 0.82
CAVIN3-202ENST00000524852 PUM3Q15397 648 aaKnown RBP20.2■□□□□ 0.82
CAVIN3-202ENST00000524852 SNAP23O00161 211 aa20.19■□□□□ 0.82
CAVIN3-202ENST00000524852 FRAT2O75474 233 aaPredicted RBP20.19■□□□□ 0.82
CAVIN3-202ENST00000524852 KLRK1P26718 216 aa20.19■□□□□ 0.82
CAVIN3-202ENST00000524852 GTF2IP78347 998 aa20.19■□□□□ 0.82
CAVIN3-202ENST00000524852 MTX1Q13505 466 aa20.19■□□□□ 0.82
CAVIN3-202ENST00000524852 RBM26Q5T8P6 1007 aaKnown RBP20.19■□□□□ 0.82
CAVIN3-202ENST00000524852 MAP1SQ66K74 1059 aaPredicted RBP20.19■□□□□ 0.82
CAVIN3-202ENST00000524852 SIL1Q9H173 461 aa20.19■□□□□ 0.82
CAVIN3-202ENST00000524852 COPRSQ9NQ92 184 aa20.19■□□□□ 0.82
CAVIN3-202ENST00000524852 HDAC9Q9UKV0 1011 aa20.19■□□□□ 0.82
CAVIN3-202ENST00000524852 SLC5A1P13866 664 aa20.18■□□□□ 0.82
CAVIN3-202ENST00000524852 IL1R1P14778 569 aa20.18■□□□□ 0.82
CAVIN3-202ENST00000524852 DACT2Q5SW24 774 aa20.18■□□□□ 0.82
CAVIN3-202ENST00000524852 YTHDC1Q96MU7 727 aaKnown RBP20.18■□□□□ 0.82
CAVIN3-202ENST00000524852 SASH1O94885 1247 aa20.17■□□□□ 0.82
CAVIN3-202ENST00000524852 TBC1D10BQ4KMP7 808 aaPredicted RBP20.17■□□□□ 0.82
CAVIN3-202ENST00000524852 SAMD7Q7Z3H4 446 aa20.17■□□□□ 0.82
CAVIN3-202ENST00000524852 LPIN2Q92539 896 aa20.17■□□□□ 0.82
CAVIN3-202ENST00000524852 DCPSQ96C86 337 aaKnown RBP20.17■□□□□ 0.82
CAVIN3-202ENST00000524852 ZBTB7BO15156 539 aaPredicted RBP20.16■□□□□ 0.82
CAVIN3-202ENST00000524852 ITGBL1O95965 494 aaPredicted RBP20.16■□□□□ 0.82
CAVIN3-202ENST00000524852 ZNF280AP59817 542 aaPredicted RBP20.16■□□□□ 0.82
CAVIN3-202ENST00000524852 KIF4BQ2VIQ3 1234 aa20.16■□□□□ 0.82
CAVIN3-202ENST00000524852 CDC37L1Q7L3B6 337 aa20.16■□□□□ 0.82
CAVIN3-202ENST00000524852 GMLQ99445 158 aa20.16■□□□□ 0.82
CAVIN3-202ENST00000524852 PGAP2Q9UHJ9 254 aa20.16■□□□□ 0.82
CAVIN3-202ENST00000524852 ZNF609O15014 1411 aa20.16■□□□□ 0.82
CAVIN3-202ENST00000524852 RLBP1P12271 317 aa20.15■□□□□ 0.82
CAVIN3-202ENST00000524852 GYG1P46976 350 aa20.15■□□□□ 0.82
CAVIN3-202ENST00000524852 G3BP1Q13283 466 aaKnown RBP eCLIP20.15■□□□□ 0.82
CAVIN3-202ENST00000524852 ATG9AQ7Z3C6 839 aa20.15■□□□□ 0.82
CAVIN3-202ENST00000524852 VGLL2Q8N8G2 317 aa20.15■□□□□ 0.82
CAVIN3-202ENST00000524852 PANK1Q8TE04 598 aa20.15■□□□□ 0.82
CAVIN3-202ENST00000524852 FAM84BQ96KN1 310 aaPredicted RBP20.15■□□□□ 0.82
CAVIN3-202ENST00000524852 AKAP2Q9Y2D5 859 aa20.15■□□□□ 0.82
CAVIN3-202ENST00000524852 IRS2Q9Y4H2 1338 aa20.15■□□□□ 0.82
CAVIN3-202ENST00000524852 FKBP1AP62942 108 aaKnown RBP20.14■□□□□ 0.81
CAVIN3-202ENST00000524852 TDRD7Q8NHU6 1098 aaKnown RBP20.14■□□□□ 0.81
CAVIN3-202ENST00000524852 TRPM4Q8TD43 1214 aa20.14■□□□□ 0.81
CAVIN3-202ENST00000524852 MYOZ2Q9NPC6 264 aa20.14■□□□□ 0.81
CAVIN3-202ENST00000524852 CREBZFQ9NS37 354 aa20.14■□□□□ 0.81
CAVIN3-202ENST00000524852 GNL3LQ9NVN8 582 aaKnown RBP20.14■□□□□ 0.81
CAVIN3-202ENST00000524852 DDX19BQ9UMR2 479 aa20.14■□□□□ 0.81
CAVIN3-202ENST00000524852 SHTN1A0MZ66 631 aa20.13■□□□□ 0.81
CAVIN3-202ENST00000524852 TMEM88BA6NKF7 163 aa20.13■□□□□ 0.81
CAVIN3-202ENST00000524852 HIRAP54198 1017 aaPredicted RBP20.13■□□□□ 0.81
CAVIN3-202ENST00000524852 ATP8B2P98198 1209 aa20.13■□□□□ 0.81
CAVIN3-202ENST00000524852 ATP2B3Q16720 1220 aa20.13■□□□□ 0.81
CAVIN3-202ENST00000524852 FBXO33Q7Z6M2 555 aa20.13■□□□□ 0.81
CAVIN3-202ENST00000524852 PA2G4Q9UQ80 394 aaKnown RBP20.13■□□□□ 0.81
CAVIN3-202ENST00000524852 PASKQ96RG2 1323 aa20.12■□□□□ 0.81
CAVIN3-202ENST00000524852 PDE3AQ14432 1141 aa20.12■□□□□ 0.81
CAVIN3-202ENST00000524852 MVPQ14764 893 aaKnown RBP20.12■□□□□ 0.81
CAVIN3-202ENST00000524852 TBC1D22AQ8WUA7 517 aa20.12■□□□□ 0.81
CAVIN3-202ENST00000524852 FAM205AQ6ZU69 1335 aa20.11■□□□□ 0.81
CAVIN3-202ENST00000524852 FGFR2P21802 821 aa20.11■□□□□ 0.81
CAVIN3-202ENST00000524852 OS9Q13438 667 aaPredicted RBP20.11■□□□□ 0.81
CAVIN3-202ENST00000524852 SCARF1Q14162 830 aa20.11■□□□□ 0.81
CAVIN3-202ENST00000524852 KIAA0825Q8IV33 1275 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms