RNA–Protein interactions for RNA: ENST00000524784.1

PACS1-202, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-202ENST00000524784 DPEP1P16444 411 aa12.85□□□□□ -0.35
PACS1-202ENST00000524784 PHKA1P46020 1223 aa12.85□□□□□ -0.35
PACS1-202ENST00000524784 BCAMP50895 628 aa12.85□□□□□ -0.35
PACS1-202ENST00000524784 FKBP4Q02790 459 aaKnown RBP eCLIP12.85□□□□□ -0.35
PACS1-202ENST00000524784 CC2D2BQ6DHV5 1058 aa12.85□□□□□ -0.35
PACS1-202ENST00000524784 PRPF40BQ6NWY9 871 aaKnown RBP12.85□□□□□ -0.35
PACS1-202ENST00000524784 TBC1D9Q6ZT07 1266 aa12.85□□□□□ -0.35
PACS1-202ENST00000524784 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
PACS1-202ENST00000524784 MPNDQ8N594 471 aa12.85□□□□□ -0.35
PACS1-202ENST00000524784 TTLL6Q8N841 843 aa12.85□□□□□ -0.35
PACS1-202ENST00000524784 FSD1Q9BTV5 496 aa12.85□□□□□ -0.35
PACS1-202ENST00000524784 PODXL2Q9NZ53 605 aa12.85□□□□□ -0.35
PACS1-202ENST00000524784 PPP1R1BQ9UD71 204 aaPredicted RBP12.85□□□□□ -0.35
PACS1-202ENST00000524784 CD2APQ9Y5K6 639 aa12.85□□□□□ -0.35
PACS1-202ENST00000524784 COL4A1P02462 1669 aa12.85□□□□□ -0.35
PACS1-202ENST00000524784 SPEF2Q9C093 1822 aa12.85□□□□□ -0.35
PACS1-202ENST00000524784 A0A0G2JLW4 131 aa12.84□□□□□ -0.35
PACS1-202ENST00000524784 C6orf229H3BNL8 230 aa12.84□□□□□ -0.35
PACS1-202ENST00000524784 ARID4AP29374 1257 aaPredicted RBP12.84□□□□□ -0.35
PACS1-202ENST00000524784 HIBADHP31937 336 aaKnown RBP12.84□□□□□ -0.35
PACS1-202ENST00000524784 GYG1P46976 350 aa12.84□□□□□ -0.35
PACS1-202ENST00000524784 TTF1Q15361 905 aaPredicted RBP12.84□□□□□ -0.35
PACS1-202ENST00000524784 LRRFIP1Q32MZ4 808 aaKnown RBP12.84□□□□□ -0.35
PACS1-202ENST00000524784 GRIPAP1Q4V328 841 aa12.84□□□□□ -0.35
PACS1-202ENST00000524784 UPF2Q9HAU5 1272 aaKnown RBP12.84□□□□□ -0.35
PACS1-202ENST00000524784 PAG1Q9NWQ8 432 aa12.84□□□□□ -0.35
PACS1-202ENST00000524784 GOLIM4O00461 696 aa12.83□□□□□ -0.36
PACS1-202ENST00000524784 FRAT2O75474 233 aaPredicted RBP12.83□□□□□ -0.36
PACS1-202ENST00000524784 DPP8Q6V1X1 898 aaPredicted RBP12.83□□□□□ -0.36
PACS1-202ENST00000524784 C15orf52Q6ZUT6 534 aaKnown RBP12.83□□□□□ -0.36
PACS1-202ENST00000524784 FBXO33Q7Z6M2 555 aa12.83□□□□□ -0.36
PACS1-202ENST00000524784 SPATA5Q8NB90 893 aa12.83□□□□□ -0.36
PACS1-202ENST00000524784 TBC1D16Q8TBP0 767 aa12.83□□□□□ -0.36
PACS1-202ENST00000524784 RUFY2Q8WXA3 655 aa12.83□□□□□ -0.36
PACS1-202ENST00000524784 FAM84BQ96KN1 310 aaPredicted RBP12.83□□□□□ -0.36
PACS1-202ENST00000524784 SGIP1Q9BQI5 828 aa12.83□□□□□ -0.36
PACS1-202ENST00000524784 SNRKQ9NRH2 765 aa12.83□□□□□ -0.36
PACS1-202ENST00000524784 DIAPH3Q9NSV4 1193 aa12.83□□□□□ -0.36
PACS1-202ENST00000524784 PIM2Q9P1W9 311 aa12.83□□□□□ -0.36
PACS1-202ENST00000524784 WTIPA6NIX2 430 aaPredicted RBP12.82□□□□□ -0.36
PACS1-202ENST00000524784 SEMA3EO15041 775 aa12.82□□□□□ -0.36
PACS1-202ENST00000524784 CHMLP26374 656 aa12.82□□□□□ -0.36
PACS1-202ENST00000524784 PTGER2P43116 358 aa12.82□□□□□ -0.36
PACS1-202ENST00000524784 MCAMP43121 646 aa12.82□□□□□ -0.36
PACS1-202ENST00000524784 ZAP70P43403 619 aa12.82□□□□□ -0.36
PACS1-202ENST00000524784 ZNF804AQ7Z570 1209 aa12.82□□□□□ -0.36
PACS1-202ENST00000524784 TICAM2Q86XR7 235 aa12.82□□□□□ -0.36
PACS1-202ENST00000524784 KBTBD3Q8NAB2 608 aa12.82□□□□□ -0.36
PACS1-202ENST00000524784 EYA3Q99504 573 aa12.82□□□□□ -0.36
PACS1-202ENST00000524784 ZNF219Q9P2Y4 722 aaPredicted RBP12.82□□□□□ -0.36
PACS1-202ENST00000524784 DENND2AQ9ULE3 1009 aa12.82□□□□□ -0.36
PACS1-202ENST00000524784 G3V3G9 751 aa12.81□□□□□ -0.36
PACS1-202ENST00000524784 KLRK1P26718 216 aa12.81□□□□□ -0.36
PACS1-202ENST00000524784 SCARF1Q14162 830 aa12.81□□□□□ -0.36
PACS1-202ENST00000524784 DCAF8Q5TAQ9 597 aa12.81□□□□□ -0.36
PACS1-202ENST00000524784 SOGA3Q5TF21 947 aa12.81□□□□□ -0.36
PACS1-202ENST00000524784 SUPT20HQ8NEM7 779 aa12.81□□□□□ -0.36
PACS1-202ENST00000524784 EDC3Q96F86 508 aaKnown RBP12.81□□□□□ -0.36
PACS1-202ENST00000524784 ZC3H12CQ9C0D7 883 aaKnown RBP12.81□□□□□ -0.36
PACS1-202ENST00000524784 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.81□□□□□ -0.36
PACS1-202ENST00000524784 HMG20BQ9P0W2 317 aa12.81□□□□□ -0.36
PACS1-202ENST00000524784 POLLQ9UGP5 575 aa12.81□□□□□ -0.36
PACS1-202ENST00000524784 NDUFB9Q9Y6M9 179 aa12.81□□□□□ -0.36
PACS1-202ENST00000524784 C21orf2O43822 256 aa12.8□□□□□ -0.36
PACS1-202ENST00000524784 REC8O95072 547 aa12.8□□□□□ -0.36
PACS1-202ENST00000524784 KCNA3P22001 575 aa12.8□□□□□ -0.36
PACS1-202ENST00000524784 MFAP1P55081 439 aaKnown RBP12.8□□□□□ -0.36
PACS1-202ENST00000524784 RASGRF1Q13972 1273 aa12.8□□□□□ -0.36
PACS1-202ENST00000524784 WASHC4Q2M389 1173 aa12.8□□□□□ -0.36
PACS1-202ENST00000524784 DALRD3Q5D0E6 543 aaKnown RBP12.8□□□□□ -0.36
PACS1-202ENST00000524784 ZSCAN25Q6NSZ9 544 aa12.8□□□□□ -0.36
PACS1-202ENST00000524784 RTKN2Q8IZC4 609 aa12.8□□□□□ -0.36
PACS1-202ENST00000524784 TSHZ2Q9NRE2 1034 aa12.8□□□□□ -0.36
PACS1-202ENST00000524784 COL11A2P13942 1736 aaPredicted RBP12.79□□□□□ -0.36
PACS1-202ENST00000524784 RIMBP2O15034 1052 aa12.79□□□□□ -0.36
PACS1-202ENST00000524784 ZBTB22O15209 634 aa12.79□□□□□ -0.36
PACS1-202ENST00000524784 ZFYP08048 801 aaPredicted RBP12.79□□□□□ -0.36
PACS1-202ENST00000524784 CCDC93Q567U6 631 aa12.79□□□□□ -0.36
PACS1-202ENST00000524784 CWC27Q6UX04 472 aaKnown RBP12.79□□□□□ -0.36
PACS1-202ENST00000524784 OLFM4Q6UX06 510 aa12.79□□□□□ -0.36
PACS1-202ENST00000524784 PI16Q6UXB8 463 aa12.79□□□□□ -0.36
PACS1-202ENST00000524784 KIAA1211Q6ZU35 1233 aa12.79□□□□□ -0.36
PACS1-202ENST00000524784 SLC51AQ86UW1 340 aa12.79□□□□□ -0.36
PACS1-202ENST00000524784 TXNRD3Q86VQ6 643 aa12.79□□□□□ -0.36
PACS1-202ENST00000524784 C7orf43Q8WVR3 580 aa12.79□□□□□ -0.36
PACS1-202ENST00000524784 ESYT1Q9BSJ8 1104 aa12.79□□□□□ -0.36
PACS1-202ENST00000524784 ANTXR1Q9H6X2 564 aa12.79□□□□□ -0.36
PACS1-202ENST00000524784 IQSEC3Q9UPP2 1182 aaPredicted RBP12.79□□□□□ -0.36
PACS1-202ENST00000524784 RFX7Q2KHR2 1363 aa12.79□□□□□ -0.36
PACS1-202ENST00000524784 MED23Q9ULK4 1368 aa12.79□□□□□ -0.36
PACS1-202ENST00000524784 RNF113AO15541 343 aaKnown RBP12.78□□□□□ -0.36
PACS1-202ENST00000524784 SEC24BO95487 1268 aa12.78□□□□□ -0.36
PACS1-202ENST00000524784 CYP2E1P05181 493 aaPredicted RBP12.78□□□□□ -0.36
PACS1-202ENST00000524784 MAP3K12Q12852 859 aa12.78□□□□□ -0.36
PACS1-202ENST00000524784 TDRD7Q8NHU6 1098 aaKnown RBP12.78□□□□□ -0.36
PACS1-202ENST00000524784 GPR101Q96P66 508 aaPredicted RBP12.78□□□□□ -0.36
PACS1-202ENST00000524784 COA1Q9GZY4 146 aa12.78□□□□□ -0.36
PACS1-202ENST00000524784 CD209Q9NNX6 404 aa12.78□□□□□ -0.36
PACS1-202ENST00000524784 LRP2BPQ9P2M1 347 aa12.78□□□□□ -0.36
PACS1-202ENST00000524784 ARAP2Q8WZ64 1704 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms