RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 HMGB1P09429 215 aaKnown RBP16.35■□□□□ 0.21
LDLRAD3-202ENST00000524419 EIF5P55010 431 aaKnown RBP16.35■□□□□ 0.21
LDLRAD3-202ENST00000524419 HS1BP3Q53T59 392 aa16.35■□□□□ 0.21
LDLRAD3-202ENST00000524419 BARGINQ6ZT62 677 aa16.35■□□□□ 0.21
LDLRAD3-202ENST00000524419 USP48Q86UV5 1035 aa16.35■□□□□ 0.21
LDLRAD3-202ENST00000524419 SYAP1Q96A49 352 aaPredicted RBP16.35■□□□□ 0.21
LDLRAD3-202ENST00000524419 MTMR6Q9Y217 621 aa16.35■□□□□ 0.21
LDLRAD3-202ENST00000524419 AKAP11Q9UKA4 1901 aa16.34■□□□□ 0.21
LDLRAD3-202ENST00000524419 PDCP20941 246 aa16.34■□□□□ 0.21
LDLRAD3-202ENST00000524419 ATP6V1AP38606 617 aa16.34■□□□□ 0.21
LDLRAD3-202ENST00000524419 CRKLP46109 303 aaKnown RBP16.34■□□□□ 0.21
LDLRAD3-202ENST00000524419 SLFNL1Q499Z3 407 aa16.34■□□□□ 0.21
LDLRAD3-202ENST00000524419 MEX3CQ5U5Q3 659 aaKnown RBP16.34■□□□□ 0.21
LDLRAD3-202ENST00000524419 INTS5Q6P9B9 1019 aaKnown RBP16.34■□□□□ 0.21
LDLRAD3-202ENST00000524419 AK7Q96M32 723 aa16.34■□□□□ 0.21
LDLRAD3-202ENST00000524419 NSFL1CQ9UNZ2 370 aaKnown RBP16.34■□□□□ 0.21
LDLRAD3-202ENST00000524419 COL5A3P25940 1745 aaPredicted RBP16.33■□□□□ 0.21
LDLRAD3-202ENST00000524419 VPS37CA5D8V6 355 aaPredicted RBP16.33■□□□□ 0.21
LDLRAD3-202ENST00000524419 GDPD2Q9HCC8 539 aa16.33■□□□□ 0.21
LDLRAD3-202ENST00000524419 CNPY2Q9Y2B0 182 aa16.33■□□□□ 0.21
LDLRAD3-202ENST00000524419 MYH14Q7Z406 1995 aaKnown RBP16.33■□□□□ 0.2
LDLRAD3-202ENST00000524419 LOC102724428A0A0B4J2F2 783 aa16.33■□□□□ 0.2
LDLRAD3-202ENST00000524419 M0R2C6 588 aa16.33■□□□□ 0.2
LDLRAD3-202ENST00000524419 HSPD1P10809 573 aaKnown RBP16.33■□□□□ 0.2
LDLRAD3-202ENST00000524419 SIK1P57059 783 aa16.33■□□□□ 0.2
LDLRAD3-202ENST00000524419 CSPP1Q1MSJ5 1256 aa16.33■□□□□ 0.2
LDLRAD3-202ENST00000524419 Q6ZUG5 572 aa16.33■□□□□ 0.2
LDLRAD3-202ENST00000524419 DDX60Q8IY21 1712 aaKnown RBP16.32■□□□□ 0.2
LDLRAD3-202ENST00000524419 BCORQ6W2J9 1755 aa16.32■□□□□ 0.2
LDLRAD3-202ENST00000524419 HSP90B1P14625 803 aaKnown RBP16.32■□□□□ 0.2
LDLRAD3-202ENST00000524419 LARP1BQ659C4 914 aaKnown RBP16.32■□□□□ 0.2
LDLRAD3-202ENST00000524419 ZNF772Q68DY9 489 aaPredicted RBP16.32■□□□□ 0.2
LDLRAD3-202ENST00000524419 ZSCAN30Q86W11 494 aa16.32■□□□□ 0.2
LDLRAD3-202ENST00000524419 PDLIM2Q96JY6 352 aa16.32■□□□□ 0.2
LDLRAD3-202ENST00000524419 SYCE3A1L190 88 aa16.31■□□□□ 0.2
LDLRAD3-202ENST00000524419 ZAP70P43403 619 aa16.31■□□□□ 0.2
LDLRAD3-202ENST00000524419 FGD1P98174 961 aa16.31■□□□□ 0.2
LDLRAD3-202ENST00000524419 STK3Q13188 491 aa16.31■□□□□ 0.2
LDLRAD3-202ENST00000524419 SCARF1Q14162 830 aa16.31■□□□□ 0.2
LDLRAD3-202ENST00000524419 WASHC4Q2M389 1173 aa16.31■□□□□ 0.2
LDLRAD3-202ENST00000524419 STOX1Q6ZVD7 989 aa16.31■□□□□ 0.2
LDLRAD3-202ENST00000524419 GTF3C6Q969F1 213 aa16.31■□□□□ 0.2
LDLRAD3-202ENST00000524419 ZNF831Q5JPB2 1677 aa16.31■□□□□ 0.2
LDLRAD3-202ENST00000524419 GADD45BO75293 160 aaPredicted RBP16.31■□□□□ 0.2
LDLRAD3-202ENST00000524419 VGLL2Q8N8G2 317 aa16.31■□□□□ 0.2
LDLRAD3-202ENST00000524419 SMARCC1Q92922 1105 aaPredicted RBP16.31■□□□□ 0.2
LDLRAD3-202ENST00000524419 OSBP2Q969R2 916 aa16.31■□□□□ 0.2
LDLRAD3-202ENST00000524419 ZNF512BQ96KM6 892 aaPredicted RBP16.31■□□□□ 0.2
LDLRAD3-202ENST00000524419 UTP14AQ9BVJ6 771 aaKnown RBP16.31■□□□□ 0.2
LDLRAD3-202ENST00000524419 PHF14O94880 888 aa16.3■□□□□ 0.2
LDLRAD3-202ENST00000524419 PARP10Q53GL7 1025 aa16.3■□□□□ 0.2
LDLRAD3-202ENST00000524419 DHX32Q7L7V1 743 aaKnown RBP16.3■□□□□ 0.2
LDLRAD3-202ENST00000524419 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.3■□□□□ 0.2
LDLRAD3-202ENST00000524419 CTNNA3Q9UI47 895 aa16.3■□□□□ 0.2
LDLRAD3-202ENST00000524419 MROH5Q6ZUA9 1318 aa16.3■□□□□ 0.2
LDLRAD3-202ENST00000524419 CAMTA2O94983 1202 aa16.29■□□□□ 0.2
LDLRAD3-202ENST00000524419 PDE8BO95263 885 aa16.29■□□□□ 0.2
LDLRAD3-202ENST00000524419 ITPK1Q13572 414 aa16.29■□□□□ 0.2
LDLRAD3-202ENST00000524419 SUSD4Q5VX71 490 aa16.29■□□□□ 0.2
LDLRAD3-202ENST00000524419 ZSCAN25Q6NSZ9 544 aa16.29■□□□□ 0.2
LDLRAD3-202ENST00000524419 APPBP2Q92624 585 aa16.29■□□□□ 0.2
LDLRAD3-202ENST00000524419 E7EWF7 191 aa16.29■□□□□ 0.2
LDLRAD3-202ENST00000524419 FIBPO43427 364 aa16.29■□□□□ 0.2
LDLRAD3-202ENST00000524419 DTNBO60941 627 aa16.29■□□□□ 0.2
LDLRAD3-202ENST00000524419 UBE2HP62256 183 aa16.29■□□□□ 0.2
LDLRAD3-202ENST00000524419 TTF1Q15361 905 aaPredicted RBP16.29■□□□□ 0.2
LDLRAD3-202ENST00000524419 PUM3Q15397 648 aaKnown RBP16.29■□□□□ 0.2
LDLRAD3-202ENST00000524419 BRF1Q92994 677 aa16.29■□□□□ 0.2
LDLRAD3-202ENST00000524419 MYO5AQ9Y4I1 1855 aaKnown RBP16.28■□□□□ 0.2
LDLRAD3-202ENST00000524419 MCAMP43121 646 aa16.28■□□□□ 0.2
LDLRAD3-202ENST00000524419 PI16Q6UXB8 463 aa16.28■□□□□ 0.2
LDLRAD3-202ENST00000524419 NAP1L5Q96NT1 182 aaPredicted RBP16.28■□□□□ 0.2
LDLRAD3-202ENST00000524419 UQCRFS1P1P0C7P4 283 aa16.27■□□□□ 0.2
LDLRAD3-202ENST00000524419 HCLS1P14317 486 aaPredicted RBP16.27■□□□□ 0.2
LDLRAD3-202ENST00000524419 DNM1Q05193 864 aaKnown RBP16.27■□□□□ 0.2
LDLRAD3-202ENST00000524419 LRRC2Q9BYS8 371 aa16.27■□□□□ 0.2
LDLRAD3-202ENST00000524419 TSPY26PQ9H489 355 aa16.27■□□□□ 0.2
LDLRAD3-202ENST00000524419 ATRNO75882 1429 aa16.27■□□□□ 0.2
LDLRAD3-202ENST00000524419 FAM177BA6PVY3 158 aa16.27■□□□□ 0.19
LDLRAD3-202ENST00000524419 EXOSC10Q01780 885 aaKnown RBP16.27■□□□□ 0.19
LDLRAD3-202ENST00000524419 IMMTQ16891 758 aaKnown RBP16.27■□□□□ 0.19
LDLRAD3-202ENST00000524419 CDC37L1Q7L3B6 337 aa16.27■□□□□ 0.19
LDLRAD3-202ENST00000524419 LPIN2Q92539 896 aa16.27■□□□□ 0.19
LDLRAD3-202ENST00000524419 PFKFB2O60825 505 aa16.26■□□□□ 0.19
LDLRAD3-202ENST00000524419 SLC5A1P13866 664 aa16.26■□□□□ 0.19
LDLRAD3-202ENST00000524419 MSNP26038 577 aaKnown RBP16.26■□□□□ 0.19
LDLRAD3-202ENST00000524419 ARID4AP29374 1257 aaPredicted RBP16.26■□□□□ 0.19
LDLRAD3-202ENST00000524419 KLHL34Q8N239 644 aa16.26■□□□□ 0.19
LDLRAD3-202ENST00000524419 LLPHQ9BRT6 129 aaKnown RBP16.26■□□□□ 0.19
LDLRAD3-202ENST00000524419 ZNF652Q9Y2D9 606 aa16.26■□□□□ 0.19
LDLRAD3-202ENST00000524419 CCDC152Q4G0S7 254 aa16.26■□□□□ 0.19
LDLRAD3-202ENST00000524419 CCDC183Q5T5S1 534 aa16.26■□□□□ 0.19
LDLRAD3-202ENST00000524419 MPHOSPH8Q99549 860 aa16.26■□□□□ 0.19
LDLRAD3-202ENST00000524419 NIP7Q9Y221 180 aaKnown RBP eCLIP16.26■□□□□ 0.19
LDLRAD3-202ENST00000524419 DOCK2Q92608 1830 aa16.25■□□□□ 0.19
LDLRAD3-202ENST00000524419 RTL9Q8NET4 1388 aa16.25■□□□□ 0.19
LDLRAD3-202ENST00000524419 A0A0G2JLW4 131 aa16.25■□□□□ 0.19
LDLRAD3-202ENST00000524419 JAK2O60674 1132 aa16.25■□□□□ 0.19
LDLRAD3-202ENST00000524419 LETM1O95202 739 aaPredicted RBP16.25■□□□□ 0.19
LDLRAD3-202ENST00000524419 ADD2P35612 726 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms