RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 ZFATQ9P243 1243 aa4.42□□□□□ -1.7
LINC01339-204ENST00000524094 USP31Q70CQ4 1352 aa4.41□□□□□ -1.7
LINC01339-204ENST00000524094 C9orf172C9J069 976 aa4.41□□□□□ -1.7
LINC01339-204ENST00000524094 CYP2E1P05181 493 aaPredicted RBP4.41□□□□□ -1.7
LINC01339-204ENST00000524094 GNA15P30679 374 aa4.41□□□□□ -1.7
LINC01339-204ENST00000524094 ARSDP51689 593 aa4.41□□□□□ -1.7
LINC01339-204ENST00000524094 RACK1P63244 317 aaKnown RBP4.41□□□□□ -1.7
LINC01339-204ENST00000524094 C8orf34Q49A92 452 aa4.41□□□□□ -1.7
LINC01339-204ENST00000524094 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.41□□□□□ -1.7
LINC01339-204ENST00000524094 SAMD5Q5TGI4 173 aa4.41□□□□□ -1.7
LINC01339-204ENST00000524094 PEAR1Q5VY43 1037 aaPredicted RBP4.41□□□□□ -1.7
LINC01339-204ENST00000524094 LILRA6Q6PI73 481 aa4.41□□□□□ -1.7
LINC01339-204ENST00000524094 CMTR1Q8N1G2 835 aaKnown RBP4.41□□□□□ -1.7
LINC01339-204ENST00000524094 PIK3R5Q8WYR1 880 aa4.41□□□□□ -1.7
LINC01339-204ENST00000524094 GSX2Q9BZM3 304 aa4.41□□□□□ -1.7
LINC01339-204ENST00000524094 SALL4Q9UJQ4 1053 aa4.41□□□□□ -1.7
LINC01339-204ENST00000524094 DBX1A6NMT0 343 aa4.4□□□□□ -1.71
LINC01339-204ENST00000524094 SCAMP3O14828 347 aaKnown RBP4.4□□□□□ -1.71
LINC01339-204ENST00000524094 EREGO14944 169 aa4.4□□□□□ -1.71
LINC01339-204ENST00000524094 F11P03951 625 aa4.4□□□□□ -1.71
LINC01339-204ENST00000524094 POLR3DP05423 398 aaPredicted RBP4.4□□□□□ -1.71
LINC01339-204ENST00000524094 TARSP26639 723 aaKnown RBP4.4□□□□□ -1.71
LINC01339-204ENST00000524094 PTPN12Q05209 780 aaKnown RBP4.4□□□□□ -1.71
LINC01339-204ENST00000524094 TNP2Q05952 138 aa4.4□□□□□ -1.71
LINC01339-204ENST00000524094 TRIM28Q13263 835 aaKnown RBP4.4□□□□□ -1.71
LINC01339-204ENST00000524094 NBPF1Q3BBV0 1214 aa4.4□□□□□ -1.71
LINC01339-204ENST00000524094 COL13A1Q5TAT6 717 aaPredicted RBP4.4□□□□□ -1.71
LINC01339-204ENST00000524094 ALG1LQ6GMV1 187 aa4.4□□□□□ -1.71
LINC01339-204ENST00000524094 PDE12Q6L8Q7 609 aaKnown RBP4.4□□□□□ -1.71
LINC01339-204ENST00000524094 GALNT12Q8IXK2 581 aa4.4□□□□□ -1.71
LINC01339-204ENST00000524094 FBF1Q8TES7 1133 aa4.4□□□□□ -1.71
LINC01339-204ENST00000524094 C8orf37Q96NL8 207 aa4.4□□□□□ -1.71
LINC01339-204ENST00000524094 SRA1Q9HD15 236 aaKnown RBP4.4□□□□□ -1.71
LINC01339-204ENST00000524094 C11orf16Q9NQ32 467 aa4.4□□□□□ -1.71
LINC01339-204ENST00000524094 ANKIB1Q9P2G1 1089 aa4.4□□□□□ -1.71
LINC01339-204ENST00000524094 UBAP1LF5GYI3 381 aa4.39□□□□□ -1.71
LINC01339-204ENST00000524094 BNIP3LO60238 219 aa4.39□□□□□ -1.71
LINC01339-204ENST00000524094 SORBS3O60504 671 aa4.39□□□□□ -1.71
LINC01339-204ENST00000524094 CPNE3O75131 537 aaKnown RBP4.39□□□□□ -1.71
LINC01339-204ENST00000524094 MED26O95402 600 aa4.39□□□□□ -1.71
LINC01339-204ENST00000524094 TATP17735 454 aaPredicted RBP4.39□□□□□ -1.71
LINC01339-204ENST00000524094 CTBSQ01459 385 aa4.39□□□□□ -1.71
LINC01339-204ENST00000524094 ARSJQ5FYB0 599 aaPredicted RBP4.39□□□□□ -1.71
LINC01339-204ENST00000524094 NLRP8Q86W28 1048 aa4.39□□□□□ -1.71
LINC01339-204ENST00000524094 NT5DC4Q86YG4 428 aa4.39□□□□□ -1.71
LINC01339-204ENST00000524094 MICALL1Q8N3F8 863 aa4.39□□□□□ -1.71
LINC01339-204ENST00000524094 TMEM87AQ8NBN3 555 aa4.39□□□□□ -1.71
LINC01339-204ENST00000524094 C3orf58Q8NDZ4 430 aa4.39□□□□□ -1.71
LINC01339-204ENST00000524094 GPAMQ9HCL2 828 aa4.39□□□□□ -1.71
LINC01339-204ENST00000524094 ZBTB42B2RXF5 422 aa4.38□□□□□ -1.71
LINC01339-204ENST00000524094 NFKBIEO00221 500 aa4.38□□□□□ -1.71
LINC01339-204ENST00000524094 XYLBO75191 536 aa4.38□□□□□ -1.71
LINC01339-204ENST00000524094 SASH3O75995 380 aa4.38□□□□□ -1.71
LINC01339-204ENST00000524094 XPCQ01831 940 aaPredicted RBP4.38□□□□□ -1.71
LINC01339-204ENST00000524094 PSMD2Q13200 908 aa4.38□□□□□ -1.71
LINC01339-204ENST00000524094 MEI1Q5TIA1 1274 aa4.38□□□□□ -1.71
LINC01339-204ENST00000524094 ADAMTSL4Q6UY14 1074 aa4.38□□□□□ -1.71
LINC01339-204ENST00000524094 BICDL1Q6ZP65 573 aa4.38□□□□□ -1.71
LINC01339-204ENST00000524094 ILDR2Q71H61 639 aa4.38□□□□□ -1.71
LINC01339-204ENST00000524094 SLC30A3Q99726 388 aa4.38□□□□□ -1.71
LINC01339-204ENST00000524094 TINF2Q9BSI4 451 aa4.38□□□□□ -1.71
LINC01339-204ENST00000524094 SSBP4Q9BWG4 385 aaPredicted RBP4.38□□□□□ -1.71
LINC01339-204ENST00000524094 LATS2Q9NRM7 1088 aa4.38□□□□□ -1.71
LINC01339-204ENST00000524094 ADGRE2Q9UHX3 823 aa4.38□□□□□ -1.71
LINC01339-204ENST00000524094 ATXN7L1Q9ULK2 861 aaPredicted RBP4.38□□□□□ -1.71
LINC01339-204ENST00000524094 A0A1W2PP55 124 aa4.37□□□□□ -1.71
LINC01339-204ENST00000524094 KIAA1324LA8MWY0 1029 aaPredicted RBP4.37□□□□□ -1.71
LINC01339-204ENST00000524094 MMP20O60882 483 aa4.37□□□□□ -1.71
LINC01339-204ENST00000524094 RPLP1P05386 114 aaKnown RBP4.37□□□□□ -1.71
LINC01339-204ENST00000524094 FAM157BP0CG42 384 aa4.37□□□□□ -1.71
LINC01339-204ENST00000524094 FGFR3P22607 806 aa4.37□□□□□ -1.71
LINC01339-204ENST00000524094 TNNI2P48788 182 aa4.37□□□□□ -1.71
LINC01339-204ENST00000524094 GRM2Q14416 872 aa4.37□□□□□ -1.71
LINC01339-204ENST00000524094 HIF1AQ16665 826 aa4.37□□□□□ -1.71
LINC01339-204ENST00000524094 KIAA0319Q5VV43 1072 aa4.37□□□□□ -1.71
LINC01339-204ENST00000524094 NXPE4Q6UWF7 544 aa4.37□□□□□ -1.71
LINC01339-204ENST00000524094 NLRP13Q86W25 1043 aa4.37□□□□□ -1.71
LINC01339-204ENST00000524094 CEP63Q96MT8 703 aa4.37□□□□□ -1.71
LINC01339-204ENST00000524094 FRMD6Q96NE9 622 aa4.37□□□□□ -1.71
LINC01339-204ENST00000524094 TCF12Q99081 682 aa4.37□□□□□ -1.71
LINC01339-204ENST00000524094 BRD7Q9NPI1 651 aa4.37□□□□□ -1.71
LINC01339-204ENST00000524094 METTL5Q9NRN9 209 aaKnown RBP4.37□□□□□ -1.71
LINC01339-204ENST00000524094 FAM13BQ9NYF5 915 aa4.37□□□□□ -1.71
LINC01339-204ENST00000524094 DDX41Q9UJV9 622 aaKnown RBP4.37□□□□□ -1.71
LINC01339-204ENST00000524094 ADAMTS4O75173 837 aa4.36□□□□□ -1.71
LINC01339-204ENST00000524094 MAPTP10636 758 aaKnown RBP4.36□□□□□ -1.71
LINC01339-204ENST00000524094 ACPPP15309 386 aa4.36□□□□□ -1.71
LINC01339-204ENST00000524094 GTF2E1P29083 439 aaPredicted RBP4.36□□□□□ -1.71
LINC01339-204ENST00000524094 NRG1Q02297 640 aaPredicted RBP4.36□□□□□ -1.71
LINC01339-204ENST00000524094 NAALADL2Q58DX5 795 aa4.36□□□□□ -1.71
LINC01339-204ENST00000524094 ZNF438Q7Z4V0 828 aa4.36□□□□□ -1.71
LINC01339-204ENST00000524094 OR13H1Q8NG92 308 aa4.36□□□□□ -1.71
LINC01339-204ENST00000524094 SNX29Q8TEQ0 813 aa4.36□□□□□ -1.71
LINC01339-204ENST00000524094 MDFIQ99750 246 aa4.36□□□□□ -1.71
LINC01339-204ENST00000524094 BCO2Q9BYV7 579 aa4.36□□□□□ -1.71
LINC01339-204ENST00000524094 C12orf49Q9H741 205 aa4.36□□□□□ -1.71
LINC01339-204ENST00000524094 NPHS2Q9NP85 383 aa4.36□□□□□ -1.71
LINC01339-204ENST00000524094 COPRSQ9NQ92 184 aa4.36□□□□□ -1.71
LINC01339-204ENST00000524094 ABI2Q9NYB9 513 aaPredicted RBP4.36□□□□□ -1.71
LINC01339-204ENST00000524094 KLF15Q9UIH9 416 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms