RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 VPS33BQ9H267 617 aa9.76□□□□□ -0.85
FAM49B-227ENST00000523514 NOB1Q9ULX3 412 aaKnown RBP9.76□□□□□ -0.85
FAM49B-227ENST00000523514 DPYSL4O14531 572 aa9.75□□□□□ -0.85
FAM49B-227ENST00000523514 RPS8P62241 208 aaKnown RBP9.75□□□□□ -0.85
FAM49B-227ENST00000523514 DPP8Q6V1X1 898 aaPredicted RBP9.75□□□□□ -0.85
FAM49B-227ENST00000523514 ANKRD18AQ8IVF6 992 aa9.75□□□□□ -0.85
FAM49B-227ENST00000523514 MPNDQ8N594 471 aa9.75□□□□□ -0.85
FAM49B-227ENST00000523514 JARID2Q92833 1246 aaPredicted RBP9.75□□□□□ -0.85
FAM49B-227ENST00000523514 CELF1Q92879 486 aaKnown RBP9.75□□□□□ -0.85
FAM49B-227ENST00000523514 GPBP1L1Q9HC44 474 aaPredicted RBP9.75□□□□□ -0.85
FAM49B-227ENST00000523514 UTYO14607 1347 aa9.75□□□□□ -0.85
FAM49B-227ENST00000523514 KDM2BQ8NHM5 1336 aa9.75□□□□□ -0.85
FAM49B-227ENST00000523514 SPEF2Q9C093 1822 aa9.75□□□□□ -0.85
FAM49B-227ENST00000523514 LTBP1Q14766 1721 aa9.74□□□□□ -0.85
FAM49B-227ENST00000523514 CSF1RP07333 972 aa9.74□□□□□ -0.85
FAM49B-227ENST00000523514 IARSP41252 1262 aaKnown RBP9.74□□□□□ -0.85
FAM49B-227ENST00000523514 OLFM4Q6UX06 510 aa9.74□□□□□ -0.85
FAM49B-227ENST00000523514 JDP2Q8WYK2 163 aa9.74□□□□□ -0.85
FAM49B-227ENST00000523514 RTFDC1Q9BY42 306 aaPredicted RBP9.74□□□□□ -0.85
FAM49B-227ENST00000523514 GREM2Q9H772 168 aa9.74□□□□□ -0.85
FAM49B-227ENST00000523514 HDAC5Q9UQL6 1122 aa9.74□□□□□ -0.85
FAM49B-227ENST00000523514 DUOX1Q9NRD9 1551 aa9.73□□□□□ -0.85
FAM49B-227ENST00000523514 ANKRD18BA2A2Z9 1011 aa9.73□□□□□ -0.85
FAM49B-227ENST00000523514 IGHMBP2P38935 993 aaKnown RBP9.73□□□□□ -0.85
FAM49B-227ENST00000523514 PRELPP51888 382 aa9.73□□□□□ -0.85
FAM49B-227ENST00000523514 FAM161AQ3B820 660 aa9.73□□□□□ -0.85
FAM49B-227ENST00000523514 ZKSCAN2Q63HK3 967 aa9.73□□□□□ -0.85
FAM49B-227ENST00000523514 ATF7IPQ6VMQ6 1270 aa9.73□□□□□ -0.85
FAM49B-227ENST00000523514 CCDC85AQ96PX6 553 aaPredicted RBP9.73□□□□□ -0.85
FAM49B-227ENST00000523514 SEC31BQ9NQW1 1179 aa9.73□□□□□ -0.85
FAM49B-227ENST00000523514 ZNF277Q9NRM2 450 aaPredicted RBP9.73□□□□□ -0.85
FAM49B-227ENST00000523514 COL4A1P02462 1669 aa9.73□□□□□ -0.85
FAM49B-227ENST00000523514 GLTPD2A6NH11 291 aa9.72□□□□□ -0.85
FAM49B-227ENST00000523514 PPIP5K2O43314 1243 aa9.72□□□□□ -0.85
FAM49B-227ENST00000523514 BCAR3O75815 825 aa9.72□□□□□ -0.85
FAM49B-227ENST00000523514 NBPF7P0C2Y1 421 aaPredicted RBP9.72□□□□□ -0.85
FAM49B-227ENST00000523514 ITGA6P23229 1130 aa9.72□□□□□ -0.85
FAM49B-227ENST00000523514 FOXO4P98177 505 aa9.72□□□□□ -0.85
FAM49B-227ENST00000523514 IFIT5Q13325 482 aaKnown RBP9.72□□□□□ -0.85
FAM49B-227ENST00000523514 CCDC57Q2TAC2 916 aa9.72□□□□□ -0.85
FAM49B-227ENST00000523514 INTS3Q68E01 1043 aaKnown RBP9.72□□□□□ -0.85
FAM49B-227ENST00000523514 LARGE2Q8N3Y3 721 aa9.72□□□□□ -0.85
FAM49B-227ENST00000523514 FRAT1Q92837 279 aaPredicted RBP9.72□□□□□ -0.85
FAM49B-227ENST00000523514 EYA3Q99504 573 aa9.72□□□□□ -0.85
FAM49B-227ENST00000523514 MPHOSPH8Q99549 860 aa9.72□□□□□ -0.85
FAM49B-227ENST00000523514 BSDC1Q9NW68 430 aaPredicted RBP9.72□□□□□ -0.85
FAM49B-227ENST00000523514 PODXL2Q9NZ53 605 aa9.72□□□□□ -0.85
FAM49B-227ENST00000523514 NSFL1CQ9UNZ2 370 aaKnown RBP9.72□□□□□ -0.85
FAM49B-227ENST00000523514 CHMP3Q9Y3E7 222 aa9.72□□□□□ -0.85
FAM49B-227ENST00000523514 XDHP47989 1333 aa9.72□□□□□ -0.85
FAM49B-227ENST00000523514 WDR90Q96KV7 1748 aa9.71□□□□□ -0.85
FAM49B-227ENST00000523514 UBTFL1P0CB47 393 aaPredicted RBP9.71□□□□□ -0.86
FAM49B-227ENST00000523514 TRIM27P14373 513 aa9.71□□□□□ -0.86
FAM49B-227ENST00000523514 MLLT3P42568 568 aaPredicted RBP9.71□□□□□ -0.86
FAM49B-227ENST00000523514 KIAA2012Q0VF49 1180 aa9.71□□□□□ -0.86
FAM49B-227ENST00000523514 RABL6Q3YEC7 729 aaPredicted RBP9.71□□□□□ -0.86
FAM49B-227ENST00000523514 TAF7LQ5H9L4 462 aa9.71□□□□□ -0.86
FAM49B-227ENST00000523514 LMBR1LQ6UX01 489 aa9.71□□□□□ -0.86
FAM49B-227ENST00000523514 NIM1KQ8IY84 436 aa9.71□□□□□ -0.86
FAM49B-227ENST00000523514 SLAIN1Q8ND83 568 aa9.71□□□□□ -0.86
FAM49B-227ENST00000523514 ZNF526Q8TF50 670 aaPredicted RBP9.71□□□□□ -0.86
FAM49B-227ENST00000523514 ANKRD2Q9GZV1 360 aa9.71□□□□□ -0.86
FAM49B-227ENST00000523514 USP44Q9H0E7 712 aa9.71□□□□□ -0.86
FAM49B-227ENST00000523514 ANKIB1Q9P2G1 1089 aa9.71□□□□□ -0.86
FAM49B-227ENST00000523514 A0A1B0GUL6 1792 aa9.7□□□□□ -0.86
FAM49B-227ENST00000523514 C6orf229H3BNL8 230 aa9.7□□□□□ -0.86
FAM49B-227ENST00000523514 FZD9O00144 591 aa9.7□□□□□ -0.86
FAM49B-227ENST00000523514 GNAI3P08754 354 aa9.7□□□□□ -0.86
FAM49B-227ENST00000523514 MS4A1P11836 297 aa9.7□□□□□ -0.86
FAM49B-227ENST00000523514 ATP2B4P23634 1241 aa9.7□□□□□ -0.86
FAM49B-227ENST00000523514 EIF6P56537 245 aaKnown RBP9.7□□□□□ -0.86
FAM49B-227ENST00000523514 GPSM2P81274 684 aa9.7□□□□□ -0.86
FAM49B-227ENST00000523514 WASHC4Q2M389 1173 aa9.7□□□□□ -0.86
FAM49B-227ENST00000523514 FTSJ3Q8IY81 847 aaKnown RBP9.7□□□□□ -0.86
FAM49B-227ENST00000523514 SUCLG2Q96I99 432 aa9.7□□□□□ -0.86
FAM49B-227ENST00000523514 GGA1Q9UJY5 639 aa9.7□□□□□ -0.86
FAM49B-227ENST00000523514 SCN4AP35499 1836 aa9.7□□□□□ -0.86
FAM49B-227ENST00000523514 UFL1O94874 794 aa9.69□□□□□ -0.86
FAM49B-227ENST00000523514 COL4A5P29400 1685 aa9.69□□□□□ -0.86
FAM49B-227ENST00000523514 AOC3Q16853 763 aa9.69□□□□□ -0.86
FAM49B-227ENST00000523514 EPHA10Q5JZY3 1008 aa9.69□□□□□ -0.86
FAM49B-227ENST00000523514 SLC51AQ86UW1 340 aa9.69□□□□□ -0.86
FAM49B-227ENST00000523514 GPC2Q8N158 579 aa9.69□□□□□ -0.86
FAM49B-227ENST00000523514 TBC1D16Q8TBP0 767 aa9.69□□□□□ -0.86
FAM49B-227ENST00000523514 KAZALD1Q96I82 304 aa9.69□□□□□ -0.86
FAM49B-227ENST00000523514 BICC1Q9H694 974 aaKnown RBP9.69□□□□□ -0.86
FAM49B-227ENST00000523514 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.69□□□□□ -0.86
FAM49B-227ENST00000523514 ZNRF3Q9ULT6 936 aa9.69□□□□□ -0.86
FAM49B-227ENST00000523514 MINPP1Q9UNW1 487 aa9.69□□□□□ -0.86
FAM49B-227ENST00000523514 MED23Q9ULK4 1368 aa9.68□□□□□ -0.86
FAM49B-227ENST00000523514 ZNF541Q9H0D2 1346 aa9.68□□□□□ -0.86
FAM49B-227ENST00000523514 IQCA1LA6NCM1 817 aa9.68□□□□□ -0.86
FAM49B-227ENST00000523514 SPDYE16A6NNV3 312 aaPredicted RBP9.68□□□□□ -0.86
FAM49B-227ENST00000523514 C16orf71Q8IYS4 520 aaPredicted RBP9.68□□□□□ -0.86
FAM49B-227ENST00000523514 DZIP1LQ8IYY4 767 aaKnown RBP9.68□□□□□ -0.86
FAM49B-227ENST00000523514 ANKRD44Q8N8A2 993 aa9.68□□□□□ -0.86
FAM49B-227ENST00000523514 OXER1Q8TDS5 423 aa9.68□□□□□ -0.86
FAM49B-227ENST00000523514 ZC3H12CQ9C0D7 883 aaKnown RBP9.68□□□□□ -0.86
FAM49B-227ENST00000523514 CNNM1Q9NRU3 951 aa9.68□□□□□ -0.86
FAM49B-227ENST00000523514 POLLQ9UGP5 575 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms