RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
DENND3-220ENST00000523066 DZIP1LQ8IYY4 767 aaKnown RBP13.17□□□□□ -0.3
DENND3-220ENST00000523066 L3MBTL3Q96JM7 780 aaPredicted RBP13.17□□□□□ -0.3
DENND3-220ENST00000523066 PSMD14O00487 310 aa13.16□□□□□ -0.3
DENND3-220ENST00000523066 TOMM70O94826 608 aa13.16□□□□□ -0.3
DENND3-220ENST00000523066 EPS15P42566 896 aa13.16□□□□□ -0.3
DENND3-220ENST00000523066 FTSJ3Q8IY81 847 aaKnown RBP13.16□□□□□ -0.3
DENND3-220ENST00000523066 C16orf71Q8IYS4 520 aaPredicted RBP13.16□□□□□ -0.3
DENND3-220ENST00000523066 ANKRD2Q9GZV1 360 aa13.16□□□□□ -0.3
DENND3-220ENST00000523066 LEMD3Q9Y2U8 911 aa13.16□□□□□ -0.3
DENND3-220ENST00000523066 RIPOR2Q9Y4F9 1068 aa13.16□□□□□ -0.3
DENND3-220ENST00000523066 MED23Q9ULK4 1368 aa13.16□□□□□ -0.3
DENND3-220ENST00000523066 IRS2Q9Y4H2 1338 aa13.15□□□□□ -0.3
DENND3-220ENST00000523066 G3V3G9 751 aa13.15□□□□□ -0.3
DENND3-220ENST00000523066 GMPSP49915 693 aaPredicted RBP13.15□□□□□ -0.3
DENND3-220ENST00000523066 PTPN12Q05209 780 aaKnown RBP13.15□□□□□ -0.3
DENND3-220ENST00000523066 DCAF8Q5TAQ9 597 aa13.15□□□□□ -0.3
DENND3-220ENST00000523066 ITPRIPQ8IWB1 547 aa13.15□□□□□ -0.3
DENND3-220ENST00000523066 TAF1DQ9H5J8 278 aaPredicted RBP13.15□□□□□ -0.3
DENND3-220ENST00000523066 C1orf115Q9H7X2 142 aa13.15□□□□□ -0.3
DENND3-220ENST00000523066 HACL1Q9UJ83 578 aa13.15□□□□□ -0.3
DENND3-220ENST00000523066 PA2G4Q9UQ80 394 aaKnown RBP13.15□□□□□ -0.3
DENND3-220ENST00000523066 GNAI3P08754 354 aa13.14□□□□□ -0.31
DENND3-220ENST00000523066 EPHX2P34913 555 aa13.14□□□□□ -0.31
DENND3-220ENST00000523066 KCNJ4P48050 445 aa13.14□□□□□ -0.31
DENND3-220ENST00000523066 EAPPQ56P03 285 aaPredicted RBP13.14□□□□□ -0.31
DENND3-220ENST00000523066 SIL1Q9H173 461 aa13.14□□□□□ -0.31
DENND3-220ENST00000523066 ADAMTSL1Q8N6G6 1762 aa13.14□□□□□ -0.31
DENND3-220ENST00000523066 C20orf194Q5TEA3 1177 aa13.13□□□□□ -0.31
DENND3-220ENST00000523066 ATG9AQ7Z3C6 839 aa13.13□□□□□ -0.31
DENND3-220ENST00000523066 RBM46Q8TBY0 533 aaKnown RBP13.13□□□□□ -0.31
DENND3-220ENST00000523066 MXD3Q9BW11 206 aa13.13□□□□□ -0.31
DENND3-220ENST00000523066 GPRC5DQ9NZD1 345 aa13.13□□□□□ -0.31
DENND3-220ENST00000523066 PNMA6EA0A0J9YXQ4 647 aa13.12□□□□□ -0.31
DENND3-220ENST00000523066 IQCA1LA6NCM1 817 aa13.12□□□□□ -0.31
DENND3-220ENST00000523066 EYA2O00167 538 aa13.12□□□□□ -0.31
DENND3-220ENST00000523066 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
DENND3-220ENST00000523066 GNAI2P04899 355 aa13.12□□□□□ -0.31
DENND3-220ENST00000523066 TNIP1Q15025 636 aa13.12□□□□□ -0.31
DENND3-220ENST00000523066 METTL24Q5JXM2 366 aa13.12□□□□□ -0.31
DENND3-220ENST00000523066 VGLL2Q8N8G2 317 aa13.12□□□□□ -0.31
DENND3-220ENST00000523066 FBXW7Q969H0 707 aa13.12□□□□□ -0.31
DENND3-220ENST00000523066 COG6Q9Y2V7 657 aa13.12□□□□□ -0.31
DENND3-220ENST00000523066 POLR2AP24928 1970 aaKnown RBP13.11□□□□□ -0.31
DENND3-220ENST00000523066 SRGAP3O43295 1099 aa13.11□□□□□ -0.31
DENND3-220ENST00000523066 EGFRP00533 1210 aa13.11□□□□□ -0.31
DENND3-220ENST00000523066 VIL1P09327 827 aaKnown RBP13.11□□□□□ -0.31
DENND3-220ENST00000523066 LMOD1P29536 600 aaPredicted RBP13.11□□□□□ -0.31
DENND3-220ENST00000523066 COA1Q9GZY4 146 aa13.11□□□□□ -0.31
DENND3-220ENST00000523066 CD209Q9NNX6 404 aa13.11□□□□□ -0.31
DENND3-220ENST00000523066 CNOT7Q9UIV1 285 aaKnown RBP13.11□□□□□ -0.31
DENND3-220ENST00000523066 JAG2Q9Y219 1238 aa13.11□□□□□ -0.31
DENND3-220ENST00000523066 MROH5Q6ZUA9 1318 aa13.11□□□□□ -0.31
DENND3-220ENST00000523066 PDE8BO95263 885 aa13.1□□□□□ -0.31
DENND3-220ENST00000523066 GYG1P46976 350 aa13.1□□□□□ -0.31
DENND3-220ENST00000523066 MTX1Q13505 466 aa13.1□□□□□ -0.31
DENND3-220ENST00000523066 C15orf52Q6ZUT6 534 aaKnown RBP13.1□□□□□ -0.31
DENND3-220ENST00000523066 PODNQ7Z5L7 613 aa13.1□□□□□ -0.31
DENND3-220ENST00000523066 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
DENND3-220ENST00000523066 TRPM4Q8TD43 1214 aa13.1□□□□□ -0.31
DENND3-220ENST00000523066 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
DENND3-220ENST00000523066 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.1□□□□□ -0.31
DENND3-220ENST00000523066 USP17L3A6NCW0 530 aa13.09□□□□□ -0.31
DENND3-220ENST00000523066 USP17L4A6NCW7 530 aa13.09□□□□□ -0.31
DENND3-220ENST00000523066 HIRAP54198 1017 aaPredicted RBP13.09□□□□□ -0.31
DENND3-220ENST00000523066 GTF2IP78347 998 aa13.09□□□□□ -0.31
DENND3-220ENST00000523066 HTRA3P83110 453 aa13.09□□□□□ -0.31
DENND3-220ENST00000523066 UBE4AQ14139 1066 aa13.09□□□□□ -0.31
DENND3-220ENST00000523066 MVPQ14764 893 aaKnown RBP13.09□□□□□ -0.31
DENND3-220ENST00000523066 MAP1SQ66K74 1059 aaPredicted RBP13.09□□□□□ -0.31
DENND3-220ENST00000523066 RSBN1LQ6PCB5 846 aaPredicted RBP13.09□□□□□ -0.31
DENND3-220ENST00000523066 USP17L1Q7RTZ2 530 aa13.09□□□□□ -0.31
DENND3-220ENST00000523066 SAMD7Q7Z3H4 446 aa13.09□□□□□ -0.31
DENND3-220ENST00000523066 SMC1BQ8NDV3 1235 aa13.09□□□□□ -0.31
DENND3-220ENST00000523066 COPRSQ9NQ92 184 aa13.09□□□□□ -0.31
DENND3-220ENST00000523066 HDAC5Q9UQL6 1122 aa13.09□□□□□ -0.31
DENND3-220ENST00000523066 MYH13Q9UKX3 1938 aa13.08□□□□□ -0.32
DENND3-220ENST00000523066 FGFR2P21802 821 aa13.08□□□□□ -0.32
DENND3-220ENST00000523066 FMR1Q06787 632 aaKnown RBP eCLIP13.08□□□□□ -0.32
DENND3-220ENST00000523066 TBC1D10BQ4KMP7 808 aaPredicted RBP13.08□□□□□ -0.32
DENND3-220ENST00000523066 DACT2Q5SW24 774 aa13.08□□□□□ -0.32
DENND3-220ENST00000523066 RBM26Q5T8P6 1007 aaKnown RBP13.08□□□□□ -0.32
DENND3-220ENST00000523066 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
DENND3-220ENST00000523066 LDHDQ86WU2 507 aa13.08□□□□□ -0.32
DENND3-220ENST00000523066 FAM84BQ96KN1 310 aaPredicted RBP13.08□□□□□ -0.32
DENND3-220ENST00000523066 GMLQ99445 158 aa13.08□□□□□ -0.32
DENND3-220ENST00000523066 ADARB2Q9NS39 739 aaKnown RBP13.08□□□□□ -0.32
DENND3-220ENST00000523066 IQSEC3Q9UPP2 1182 aaPredicted RBP13.08□□□□□ -0.32
DENND3-220ENST00000523066 CIAO1O76071 339 aa13.07□□□□□ -0.32
DENND3-220ENST00000523066 HSPA6P17066 643 aa13.07□□□□□ -0.32
DENND3-220ENST00000523066 ATP8B2P98198 1209 aa13.07□□□□□ -0.32
DENND3-220ENST00000523066 FSTL1Q12841 308 aa13.07□□□□□ -0.32
DENND3-220ENST00000523066 TTLL5Q6EMB2 1281 aa13.07□□□□□ -0.32
DENND3-220ENST00000523066 ZNF804AQ7Z570 1209 aa13.07□□□□□ -0.32
DENND3-220ENST00000523066 PNMA8AQ86V59 439 aaPredicted RBP13.07□□□□□ -0.32
DENND3-220ENST00000523066 DPF2Q92785 391 aa13.07□□□□□ -0.32
DENND3-220ENST00000523066 ARAP2Q8WZ64 1704 aa13.06□□□□□ -0.32
DENND3-220ENST00000523066 H7C1D1 291 aa13.06□□□□□ -0.32
DENND3-220ENST00000523066 IL1R1P14778 569 aa13.06□□□□□ -0.32
DENND3-220ENST00000523066 HIBADHP31937 336 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms