RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 SULF1Q8IWU6 871 aa19.25■□□□□ 0.67
PCM1-218ENST00000523055 NEURL1BA8MQ27 555 aa19.25■□□□□ 0.67
PCM1-218ENST00000523055 SLFN5Q08AF3 891 aa19.25■□□□□ 0.67
PCM1-218ENST00000523055 SF3B3Q15393 1217 aaKnown RBP19.25■□□□□ 0.67
PCM1-218ENST00000523055 MOB2Q70IA6 237 aa19.25■□□□□ 0.67
PCM1-218ENST00000523055 E9PSI1 815 aa19.24■□□□□ 0.67
PCM1-218ENST00000523055 F6X3S4 739 aa19.24■□□□□ 0.67
PCM1-218ENST00000523055 TBC1D8O95759 1140 aa19.24■□□□□ 0.67
PCM1-218ENST00000523055 DNAAF4Q8WXU2 420 aa19.24■□□□□ 0.67
PCM1-218ENST00000523055 CCDC85AQ96PX6 553 aaPredicted RBP19.24■□□□□ 0.67
PCM1-218ENST00000523055 PAPPA2Q9BXP8 1791 aa19.23■□□□□ 0.67
PCM1-218ENST00000523055 C6orf229H3BNL8 230 aa19.23■□□□□ 0.67
PCM1-218ENST00000523055 ZNF280AP59817 542 aaPredicted RBP19.23■□□□□ 0.67
PCM1-218ENST00000523055 NEXNQ0ZGT2 675 aa19.23■□□□□ 0.67
PCM1-218ENST00000523055 TBC1D16Q8TBP0 767 aa19.23■□□□□ 0.67
PCM1-218ENST00000523055 ZNF609O15014 1411 aa19.22■□□□□ 0.67
PCM1-218ENST00000523055 SCARF1Q14162 830 aa19.22■□□□□ 0.67
PCM1-218ENST00000523055 ANGEL2Q5VTE6 544 aaKnown RBP19.22■□□□□ 0.67
PCM1-218ENST00000523055 SEC31BQ9NQW1 1179 aa19.22■□□□□ 0.67
PCM1-218ENST00000523055 FKBP1BP68106 108 aa19.21■□□□□ 0.67
PCM1-218ENST00000523055 HDAC9Q9UKV0 1011 aa19.21■□□□□ 0.67
PCM1-218ENST00000523055 GPR25O00155 361 aa19.2■□□□□ 0.66
PCM1-218ENST00000523055 PDE8AO60658 829 aa19.2■□□□□ 0.66
PCM1-218ENST00000523055 NOM1Q5C9Z4 860 aaKnown RBP19.2■□□□□ 0.66
PCM1-218ENST00000523055 HABP4Q5JVS0 413 aaKnown RBP19.2■□□□□ 0.66
PCM1-218ENST00000523055 UBE3BQ7Z3V4 1068 aa19.2■□□□□ 0.66
PCM1-218ENST00000523055 GMLQ99445 158 aa19.2■□□□□ 0.66
PCM1-218ENST00000523055 SCAF8Q9UPN6 1271 aaKnown RBP19.2■□□□□ 0.66
PCM1-218ENST00000523055 TM4SF4P48230 202 aa19.19■□□□□ 0.66
PCM1-218ENST00000523055 GCKRQ14397 625 aa19.19■□□□□ 0.66
PCM1-218ENST00000523055 FBXO46Q6PJ61 603 aaPredicted RBP19.19■□□□□ 0.66
PCM1-218ENST00000523055 EYA3Q99504 573 aa19.19■□□□□ 0.66
PCM1-218ENST00000523055 R3HDMLQ9H3Y0 253 aa19.19■□□□□ 0.66
PCM1-218ENST00000523055 UBE2Q2LH0YL09 131 aa19.18■□□□□ 0.66
PCM1-218ENST00000523055 TRMT2AQ8IZ69 625 aaKnown RBP19.18■□□□□ 0.66
PCM1-218ENST00000523055 LINS1Q8NG48 757 aa19.18■□□□□ 0.66
PCM1-218ENST00000523055 GCC1Q96CN9 775 aa19.18■□□□□ 0.66
PCM1-218ENST00000523055 PODXL2Q9NZ53 605 aa19.18■□□□□ 0.66
PCM1-218ENST00000523055 KIAA0100Q14667 2235 aaKnown RBP19.18■□□□□ 0.66
PCM1-218ENST00000523055 H7C1W4 665 aa19.17■□□□□ 0.66
PCM1-218ENST00000523055 CASP7P55210 303 aa19.17■□□□□ 0.66
PCM1-218ENST00000523055 CTSWP56202 376 aa19.17■□□□□ 0.66
PCM1-218ENST00000523055 RSBN1LQ6PCB5 846 aaPredicted RBP19.17■□□□□ 0.66
PCM1-218ENST00000523055 A0A1B0GUL6 1792 aa19.17■□□□□ 0.66
PCM1-218ENST00000523055 PSME4Q14997 1843 aa19.17■□□□□ 0.66
PCM1-218ENST00000523055 CCDC152Q4G0S7 254 aa19.17■□□□□ 0.66
PCM1-218ENST00000523055 BEND3Q5T5X7 828 aa19.17■□□□□ 0.66
PCM1-218ENST00000523055 PRAMEF18Q5VWM3 479 aa19.17■□□□□ 0.66
PCM1-218ENST00000523055 MRPL50Q8N5N7 158 aaKnown RBP19.17■□□□□ 0.66
PCM1-218ENST00000523055 AGBL3Q8NEM8 1001 aa19.17■□□□□ 0.66
PCM1-218ENST00000523055 SSH1Q8WYL5 1049 aa19.17■□□□□ 0.66
PCM1-218ENST00000523055 CFHR5Q9BXR6 569 aa19.17■□□□□ 0.66
PCM1-218ENST00000523055 PITPNM2Q9BZ72 1349 aa19.17■□□□□ 0.66
PCM1-218ENST00000523055 RPS8P62241 208 aaKnown RBP19.16■□□□□ 0.66
PCM1-218ENST00000523055 ZC3H12CQ9C0D7 883 aaKnown RBP19.16■□□□□ 0.66
PCM1-218ENST00000523055 HSP90B1P14625 803 aaKnown RBP19.15■□□□□ 0.66
PCM1-218ENST00000523055 TTLL11Q8NHH1 800 aa19.15■□□□□ 0.66
PCM1-218ENST00000523055 GREM2Q9H772 168 aa19.15■□□□□ 0.66
PCM1-218ENST00000523055 MYOZ2Q9NPC6 264 aa19.15■□□□□ 0.66
PCM1-218ENST00000523055 SLC4A10Q6U841 1118 aa19.14■□□□□ 0.65
PCM1-218ENST00000523055 SZT2Q5T011 3432 aa19.14■□□□□ 0.65
PCM1-218ENST00000523055 POTEFA5A3E0 1075 aa19.13■□□□□ 0.65
PCM1-218ENST00000523055 FKTNO75072 461 aa19.12■□□□□ 0.65
PCM1-218ENST00000523055 UFL1O94874 794 aa19.12■□□□□ 0.65
PCM1-218ENST00000523055 USP17L8P0C7I0 530 aa19.12■□□□□ 0.65
PCM1-218ENST00000523055 NBPF9Q3BBW0 867 aa19.12■□□□□ 0.65
PCM1-218ENST00000523055 MKRN3Q13064 507 aaKnown RBP19.11■□□□□ 0.65
PCM1-218ENST00000523055 PLA2G12BQ9BX93 195 aa19.11■□□□□ 0.65
PCM1-218ENST00000523055 FXR1P51114 621 aaKnown RBP eCLIP19.1■□□□□ 0.65
PCM1-218ENST00000523055 HNRNPUQ00839 825 aaKnown RBP eCLIP19.1■□□□□ 0.65
PCM1-218ENST00000523055 ANKRD18AQ8IVF6 992 aa19.1■□□□□ 0.65
PCM1-218ENST00000523055 GGA1Q9UJY5 639 aa19.1■□□□□ 0.65
PCM1-218ENST00000523055 WTIPA6NIX2 430 aaPredicted RBP19.09■□□□□ 0.65
PCM1-218ENST00000523055 PTPN12Q05209 780 aaKnown RBP19.09■□□□□ 0.65
PCM1-218ENST00000523055 SMC4Q9NTJ3 1288 aa19.09■□□□□ 0.65
PCM1-218ENST00000523055 ZNF646O15015 1829 aaPredicted RBP19.09■□□□□ 0.65
PCM1-218ENST00000523055 GRM8O00222 908 aa19.08■□□□□ 0.65
PCM1-218ENST00000523055 EPHA10Q5JZY3 1008 aa19.08■□□□□ 0.65
PCM1-218ENST00000523055 CDC5LQ99459 802 aaKnown RBP19.08■□□□□ 0.65
PCM1-218ENST00000523055 SRCIN1Q9C0H9 1055 aa19.08■□□□□ 0.65
PCM1-218ENST00000523055 ANKIB1Q9P2G1 1089 aa19.08■□□□□ 0.65
PCM1-218ENST00000523055 PTPRCP08575 1304 aa19.08■□□□□ 0.64
PCM1-218ENST00000523055 CSF1RP07333 972 aa19.08■□□□□ 0.64
PCM1-218ENST00000523055 ITGA6P23229 1130 aa19.08■□□□□ 0.64
PCM1-218ENST00000523055 FOXO4P98177 505 aa19.08■□□□□ 0.64
PCM1-218ENST00000523055 ALDH1L2Q3SY69 923 aa19.08■□□□□ 0.64
PCM1-218ENST00000523055 USP17L3A6NCW0 530 aa19.07■□□□□ 0.64
PCM1-218ENST00000523055 USP17L4A6NCW7 530 aa19.07■□□□□ 0.64
PCM1-218ENST00000523055 WNT10BO00744 389 aa19.07■□□□□ 0.64
PCM1-218ENST00000523055 ALDH1L1O75891 902 aa19.07■□□□□ 0.64
PCM1-218ENST00000523055 SREBF2Q12772 1141 aa19.07■□□□□ 0.64
PCM1-218ENST00000523055 LDLRAD1Q5T700 205 aa19.07■□□□□ 0.64
PCM1-218ENST00000523055 OTOP1Q7RTM1 612 aa19.07■□□□□ 0.64
PCM1-218ENST00000523055 USP17L1Q7RTZ2 530 aa19.07■□□□□ 0.64
PCM1-218ENST00000523055 PODNQ7Z5L7 613 aa19.07■□□□□ 0.64
PCM1-218ENST00000523055 MXD3Q9BW11 206 aa19.07■□□□□ 0.64
PCM1-218ENST00000523055 CEP290O15078 2479 aa19.06■□□□□ 0.64
PCM1-218ENST00000523055 G3V3G9 751 aa19.06■□□□□ 0.64
PCM1-218ENST00000523055 NBPF7P0C2Y1 421 aaPredicted RBP19.06■□□□□ 0.64
PCM1-218ENST00000523055 DCAF8Q5TAQ9 597 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms