RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 USP17L1Q7RTZ2 530 aa13.02□□□□□ -0.33
CTNNA1-235ENST00000522730 MXD3Q9BW11 206 aa13.02□□□□□ -0.33
CTNNA1-235ENST00000522730 ANKRD18BA2A2Z9 1011 aa13.01□□□□□ -0.33
CTNNA1-235ENST00000522730 USP17L8P0C7I0 530 aa13.01□□□□□ -0.33
CTNNA1-235ENST00000522730 SCARF1Q14162 830 aa13.01□□□□□ -0.33
CTNNA1-235ENST00000522730 PODNQ7Z5L7 613 aa13.01□□□□□ -0.33
CTNNA1-235ENST00000522730 SAPCD2Q86UD0 394 aa13.01□□□□□ -0.33
CTNNA1-235ENST00000522730 HELBQ8NG08 1087 aaPredicted RBP13.01□□□□□ -0.33
CTNNA1-235ENST00000522730 ANKRD2Q9GZV1 360 aa13.01□□□□□ -0.33
CTNNA1-235ENST00000522730 ASTN2O75129 1339 aaPredicted RBP13.01□□□□□ -0.33
CTNNA1-235ENST00000522730 LRRC37AA6NMS7 1700 aa13.01□□□□□ -0.33
CTNNA1-235ENST00000522730 PLIN1O60240 522 aa13□□□□□ -0.33
CTNNA1-235ENST00000522730 CSF1RP07333 972 aa13□□□□□ -0.33
CTNNA1-235ENST00000522730 CASP7P55210 303 aa13□□□□□ -0.33
CTNNA1-235ENST00000522730 HUNKP57058 714 aa13□□□□□ -0.33
CTNNA1-235ENST00000522730 BEND3Q5T5X7 828 aa13□□□□□ -0.33
CTNNA1-235ENST00000522730 DIEXFQ68CQ4 756 aaKnown RBP13□□□□□ -0.33
CTNNA1-235ENST00000522730 TXNRD3Q86VQ6 643 aa13□□□□□ -0.33
CTNNA1-235ENST00000522730 SULF1Q8IWU6 871 aa13□□□□□ -0.33
CTNNA1-235ENST00000522730 GGA3Q9NZ52 723 aa13□□□□□ -0.33
CTNNA1-235ENST00000522730 C9orf78Q9NZ63 289 aaPredicted RBP13□□□□□ -0.33
CTNNA1-235ENST00000522730 TSKSQ9UJT2 592 aa13□□□□□ -0.33
CTNNA1-235ENST00000522730 SCAF8Q9UPN6 1271 aaKnown RBP13□□□□□ -0.33
CTNNA1-235ENST00000522730 ZNF804BA4D1E1 1349 aa12.99□□□□□ -0.33
CTNNA1-235ENST00000522730 TAF5LO75529 589 aa12.99□□□□□ -0.33
CTNNA1-235ENST00000522730 KLRK1P26718 216 aa12.99□□□□□ -0.33
CTNNA1-235ENST00000522730 IFIT5Q13325 482 aaKnown RBP12.99□□□□□ -0.33
CTNNA1-235ENST00000522730 TAF7LQ5H9L4 462 aa12.99□□□□□ -0.33
CTNNA1-235ENST00000522730 ANGEL2Q5VTE6 544 aaKnown RBP12.99□□□□□ -0.33
CTNNA1-235ENST00000522730 LMBR1LQ6UX01 489 aa12.99□□□□□ -0.33
CTNNA1-235ENST00000522730 C2orf69Q8N8R5 385 aa12.99□□□□□ -0.33
CTNNA1-235ENST00000522730 AGBL3Q8NEM8 1001 aa12.99□□□□□ -0.33
CTNNA1-235ENST00000522730 PLA2G12BQ9BX93 195 aa12.99□□□□□ -0.33
CTNNA1-235ENST00000522730 LEMD3Q9Y2U8 911 aa12.99□□□□□ -0.33
CTNNA1-235ENST00000522730 SNAP23O00161 211 aa12.98□□□□□ -0.33
CTNNA1-235ENST00000522730 HSPA8P11142 646 aaKnown RBP12.98□□□□□ -0.33
CTNNA1-235ENST00000522730 ZNF280AP59817 542 aaPredicted RBP12.98□□□□□ -0.33
CTNNA1-235ENST00000522730 FOXO4P98177 505 aa12.98□□□□□ -0.33
CTNNA1-235ENST00000522730 CHRNDQ07001 517 aa12.98□□□□□ -0.33
CTNNA1-235ENST00000522730 EPHA10Q5JZY3 1008 aa12.98□□□□□ -0.33
CTNNA1-235ENST00000522730 TTLL5Q6EMB2 1281 aa12.98□□□□□ -0.33
CTNNA1-235ENST00000522730 OGFOD1Q8N543 542 aa12.98□□□□□ -0.33
CTNNA1-235ENST00000522730 ZNF594Q96JF6 807 aaPredicted RBP12.98□□□□□ -0.33
CTNNA1-235ENST00000522730 MYOZ2Q9NPC6 264 aa12.98□□□□□ -0.33
CTNNA1-235ENST00000522730 PRDM10Q9NQV6 1147 aa12.98□□□□□ -0.33
CTNNA1-235ENST00000522730 MAP2K2P36507 400 aa12.97□□□□□ -0.33
CTNNA1-235ENST00000522730 GTF2IP78347 998 aa12.97□□□□□ -0.33
CTNNA1-235ENST00000522730 CCDC57Q2TAC2 916 aa12.97□□□□□ -0.33
CTNNA1-235ENST00000522730 GMLQ99445 158 aa12.97□□□□□ -0.33
CTNNA1-235ENST00000522730 COA1Q9GZY4 146 aa12.97□□□□□ -0.33
CTNNA1-235ENST00000522730 GBA2Q9HCG7 927 aaPredicted RBP12.97□□□□□ -0.33
CTNNA1-235ENST00000522730 MED23Q9ULK4 1368 aa12.96□□□□□ -0.33
CTNNA1-235ENST00000522730 TRPM7Q96QT4 1865 aa12.96□□□□□ -0.33
CTNNA1-235ENST00000522730 GRM8O00222 908 aa12.96□□□□□ -0.33
CTNNA1-235ENST00000522730 ZNF157P51786 506 aaPredicted RBP12.96□□□□□ -0.33
CTNNA1-235ENST00000522730 NBPF9Q3BBW0 867 aa12.96□□□□□ -0.33
CTNNA1-235ENST00000522730 DACT2Q5SW24 774 aa12.96□□□□□ -0.33
CTNNA1-235ENST00000522730 PRAMEF18Q5VWM3 479 aa12.96□□□□□ -0.33
CTNNA1-235ENST00000522730 CDCA5Q96FF9 252 aa12.96□□□□□ -0.33
CTNNA1-235ENST00000522730 ZIC5Q96T25 663 aa12.96□□□□□ -0.33
CTNNA1-235ENST00000522730 SRCIN1Q9C0H9 1055 aa12.96□□□□□ -0.33
CTNNA1-235ENST00000522730 CNNM1Q9NRU3 951 aa12.96□□□□□ -0.33
CTNNA1-235ENST00000522730 SCN9AQ15858 1988 aa12.96□□□□□ -0.34
CTNNA1-235ENST00000522730 POLR2AP24928 1970 aaKnown RBP12.95□□□□□ -0.34
CTNNA1-235ENST00000522730 STRIP1Q5VSL9 837 aa12.95□□□□□ -0.34
CTNNA1-235ENST00000522730 RGMBQ6NW40 437 aa12.95□□□□□ -0.34
CTNNA1-235ENST00000522730 LDHAL6AQ6ZMR3 332 aa12.95□□□□□ -0.34
CTNNA1-235ENST00000522730 KIAA0825Q8IV33 1275 aa12.95□□□□□ -0.34
CTNNA1-235ENST00000522730 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.95□□□□□ -0.34
CTNNA1-235ENST00000522730 JAG2Q9Y219 1238 aa12.95□□□□□ -0.34
CTNNA1-235ENST00000522730 ALDH1L1O75891 902 aa12.94□□□□□ -0.34
CTNNA1-235ENST00000522730 SASH1O94885 1247 aa12.94□□□□□ -0.34
CTNNA1-235ENST00000522730 TTLL12Q14166 644 aaPredicted RBP12.94□□□□□ -0.34
CTNNA1-235ENST00000522730 HHIPL1Q96JK4 782 aa12.94□□□□□ -0.34
CTNNA1-235ENST00000522730 CD209Q9NNX6 404 aa12.94□□□□□ -0.34
CTNNA1-235ENST00000522730 SPEF2Q9C093 1822 aa12.94□□□□□ -0.34
CTNNA1-235ENST00000522730 F8W031 263 aaPredicted RBP12.93□□□□□ -0.34
CTNNA1-235ENST00000522730 KIF23Q02241 960 aaPredicted RBP12.93□□□□□ -0.34
CTNNA1-235ENST00000522730 NOGQ13253 232 aa12.93□□□□□ -0.34
CTNNA1-235ENST00000522730 MOB2Q70IA6 237 aa12.93□□□□□ -0.34
CTNNA1-235ENST00000522730 MRPL50Q8N5N7 158 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-235ENST00000522730 CCDC102AQ96A19 550 aa12.93□□□□□ -0.34
CTNNA1-235ENST00000522730 CDCA7LQ96GN5 454 aa12.93□□□□□ -0.34
CTNNA1-235ENST00000522730 SUCLG2Q96I99 432 aa12.93□□□□□ -0.34
CTNNA1-235ENST00000522730 HDAC9Q9UKV0 1011 aa12.93□□□□□ -0.34
CTNNA1-235ENST00000522730 MYH3P11055 1940 aa12.92□□□□□ -0.34
CTNNA1-235ENST00000522730 E9PSI1 815 aa12.92□□□□□ -0.34
CTNNA1-235ENST00000522730 UBE2Q2LH0YL09 131 aa12.92□□□□□ -0.34
CTNNA1-235ENST00000522730 NBPF7P0C2Y1 421 aaPredicted RBP12.92□□□□□ -0.34
CTNNA1-235ENST00000522730 BRPF1P55201 1214 aaPredicted RBP12.92□□□□□ -0.34
CTNNA1-235ENST00000522730 PRKG1Q13976 671 aa12.92□□□□□ -0.34
CTNNA1-235ENST00000522730 ZNF804AQ7Z570 1209 aa12.92□□□□□ -0.34
CTNNA1-235ENST00000522730 SSH1Q8WYL5 1049 aa12.92□□□□□ -0.34
CTNNA1-235ENST00000522730 PUS3Q9BZE2 481 aaKnown RBP12.92□□□□□ -0.34
CTNNA1-235ENST00000522730 MYO3BQ8WXR4 1341 aa12.91□□□□□ -0.34
CTNNA1-235ENST00000522730 ZNF521Q96K83 1311 aa12.91□□□□□ -0.34
CTNNA1-235ENST00000522730 WNT10BO00744 389 aa12.91□□□□□ -0.34
CTNNA1-235ENST00000522730 SLFN5Q08AF3 891 aa12.91□□□□□ -0.34
CTNNA1-235ENST00000522730 FAM155AB1AL88 458 aaPredicted RBP12.9□□□□□ -0.34
CTNNA1-235ENST00000522730 RBM5P52756 815 aaKnown RBP eCLIP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms