RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	PDE12	Q6L8Q7	609 aa	Known RBP	10.05	□□□□□ -0.8
SPIDR-215	ENST00000521798	RASGRP4	Q8TDF6	673 aa		10.05	□□□□□ -0.8
SPIDR-215	ENST00000521798	C7orf43	Q8WVR3	580 aa		10.05	□□□□□ -0.8
SPIDR-215	ENST00000521798	ZFYVE28	Q9HCC9	887 aa		10.05	□□□□□ -0.8
SPIDR-215	ENST00000521798	DMGDH	Q9UI17	866 aa	Known RBP	10.05	□□□□□ -0.8
SPIDR-215	ENST00000521798	LIAT1	Q6ZQX7	453 aa		10.04	□□□□□ -0.8
SPIDR-215	ENST00000521798	ZNF438	Q7Z4V0	828 aa		10.04	□□□□□ -0.8
SPIDR-215	ENST00000521798	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.04	□□□□□ -0.8
SPIDR-215	ENST00000521798	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
SPIDR-215	ENST00000521798	FNDC3A	Q9Y2H6	1198 aa	Known RBP	10.04	□□□□□ -0.8
SPIDR-215	ENST00000521798	GPC6	Q9Y625	555 aa	Predicted RBP	10.04	□□□□□ -0.8
SPIDR-215	ENST00000521798	ERBIN	Q96RT1	1412 aa		10.04	□□□□□ -0.8
SPIDR-215	ENST00000521798	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.04	□□□□□ -0.8
SPIDR-215	ENST00000521798	POTEC	B2RU33	542 aa		10.03	□□□□□ -0.8
SPIDR-215	ENST00000521798	PLA2G4A	P47712	749 aa		10.03	□□□□□ -0.8
SPIDR-215	ENST00000521798	IDH3A	P50213	366 aa		10.03	□□□□□ -0.8
SPIDR-215	ENST00000521798	BMS1	Q14692	1282 aa	Known RBP	10.03	□□□□□ -0.8
SPIDR-215	ENST00000521798	GNAS	Q5JWF2	1037 aa		10.03	□□□□□ -0.8
SPIDR-215	ENST00000521798	SUSD3	Q96L08	255 aa		10.03	□□□□□ -0.8
SPIDR-215	ENST00000521798	AGBL1	Q96MI9	1066 aa		10.03	□□□□□ -0.8
SPIDR-215	ENST00000521798	NPHS2	Q9NP85	383 aa		10.03	□□□□□ -0.8
SPIDR-215	ENST00000521798	ZDHHC3	Q9NYG2	299 aa		10.03	□□□□□ -0.8
SPIDR-215	ENST00000521798	RNF17	Q9BXT8	1623 aa	Known RBP	10.03	□□□□□ -0.8
SPIDR-215	ENST00000521798	ZMYM3	Q14202	1370 aa		10.02	□□□□□ -0.8
SPIDR-215	ENST00000521798	PHACTR2	O75167	634 aa		10.02	□□□□□ -0.81
SPIDR-215	ENST00000521798	ARSD	P51689	593 aa		10.02	□□□□□ -0.81
SPIDR-215	ENST00000521798	NFE2L2	Q16236	605 aa		10.02	□□□□□ -0.81
SPIDR-215	ENST00000521798	NBPF1	Q3BBV0	1214 aa		10.02	□□□□□ -0.81
SPIDR-215	ENST00000521798	NBPF6	Q5VWK0	638 aa		10.02	□□□□□ -0.81
SPIDR-215	ENST00000521798	NBPF10	Q6P3W6	841 aa	Known RBP	10.02	□□□□□ -0.81
SPIDR-215	ENST00000521798	JAZF1	Q86VZ6	243 aa		10.02	□□□□□ -0.81
SPIDR-215	ENST00000521798	NBPF4	Q96M43	638 aa		10.02	□□□□□ -0.81
SPIDR-215	ENST00000521798	COPRS	Q9NQ92	184 aa		10.02	□□□□□ -0.81
SPIDR-215	ENST00000521798	MROH1	Q8NDA8	1641 aa		10.02	□□□□□ -0.81
SPIDR-215	ENST00000521798	MROH2A	A6NES4	1674 aa		10.02	□□□□□ -0.81
SPIDR-215	ENST00000521798	C3	P01024	1663 aa		10.02	□□□□□ -0.81
SPIDR-215	ENST00000521798	CLTC	Q00610	1675 aa	Known RBP	10.02	□□□□□ -0.81
SPIDR-215	ENST00000521798	KDM5D	Q9BY66	1539 aa		10.02	□□□□□ -0.81
SPIDR-215	ENST00000521798	FAM135A	Q9P2D6	1515 aa		10.02	□□□□□ -0.81
SPIDR-215	ENST00000521798	ROCK1	Q13464	1354 aa		10.01	□□□□□ -0.81
SPIDR-215	ENST00000521798	GPC1	P35052	558 aa		10.01	□□□□□ -0.81
SPIDR-215	ENST00000521798	TRIP4	Q15650	581 aa	Predicted RBP	10.01	□□□□□ -0.81
SPIDR-215	ENST00000521798	NXPE4	Q6UWF7	544 aa		10.01	□□□□□ -0.81
SPIDR-215	ENST00000521798	CKAP2L	Q8IYA6	745 aa		10.01	□□□□□ -0.81
SPIDR-215	ENST00000521798	ITPKC	Q96DU7	683 aa		10.01	□□□□□ -0.81
SPIDR-215	ENST00000521798	NOC4L	Q9BVI4	516 aa	Known RBP	10.01	□□□□□ -0.81
SPIDR-215	ENST00000521798	BCO2	Q9BYV7	579 aa		10.01	□□□□□ -0.81
SPIDR-215	ENST00000521798	GRIP2	Q9C0E4	1043 aa		10.01	□□□□□ -0.81
SPIDR-215	ENST00000521798	LMTK3	Q96Q04	1460 aa		10.01	□□□□□ -0.81
SPIDR-215	ENST00000521798	INPP5B	P32019	993 aa		10	□□□□□ -0.81
SPIDR-215	ENST00000521798	RELB	Q01201	579 aa		10	□□□□□ -0.81
SPIDR-215	ENST00000521798	C4orf17	Q53FE4	359 aa		10	□□□□□ -0.81
SPIDR-215	ENST00000521798	ZNF280C	Q8ND82	737 aa		10	□□□□□ -0.81
SPIDR-215	ENST00000521798	EMID1	Q96A84	441 aa	Predicted RBP	10	□□□□□ -0.81
SPIDR-215	ENST00000521798	SEC16B	Q96JE7	1060 aa		10	□□□□□ -0.81
SPIDR-215	ENST00000521798	ELP3	Q9H9T3	547 aa		10	□□□□□ -0.81
SPIDR-215	ENST00000521798	KBTBD4	Q9NVX7	518 aa		10	□□□□□ -0.81
SPIDR-215	ENST00000521798	KCNMB2	Q9Y691	235 aa		10	□□□□□ -0.81
SPIDR-215	ENST00000521798	WASHC2C	Q9Y4E1	1318 aa		10	□□□□□ -0.81
SPIDR-215	ENST00000521798	ANKRD50	Q9ULJ7	1429 aa		9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	ABCC3	O15438	1527 aa		9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	PRDM15	P57071	1507 aa	Predicted RBP	9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	UBAP1L	F5GYI3	381 aa		9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	ALDH1A1	P00352	501 aa		9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	TCEAL1	Q15170	157 aa		9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	GALNT12	Q8IXK2	581 aa		9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	KLRG1	Q96E93	195 aa		9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	HSH2D	Q96JZ2	352 aa		9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	SPACA7	Q96KW9	195 aa		9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	KLF16	Q9BXK1	252 aa	Predicted RBP	9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	ZNF395	Q9H8N7	513 aa	Predicted RBP	9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	TMEM63C	Q9P1W3	806 aa		9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	USP20	Q9Y2K6	914 aa		9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	RTCB	Q9Y3I0	505 aa	Known RBP	9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	WASF2	Q9Y6W5	498 aa		9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	NPAT	Q14207	1427 aa		9.99	□□□□□ -0.81
SPIDR-215	ENST00000521798	DEPDC5	O75140	1603 aa		9.98	□□□□□ -0.81
SPIDR-215	ENST00000521798	ZIC2	O95409	532 aa	Predicted RBP	9.98	□□□□□ -0.81
SPIDR-215	ENST00000521798	SERINC3	Q13530	473 aa		9.98	□□□□□ -0.81
SPIDR-215	ENST00000521798	MRFAP1L1	Q96HT8	127 aa		9.98	□□□□□ -0.81
SPIDR-215	ENST00000521798	SPON2	Q9BUD6	331 aa		9.98	□□□□□ -0.81
SPIDR-215	ENST00000521798	RSRP1	Q9BUV0	290 aa		9.98	□□□□□ -0.81
SPIDR-215	ENST00000521798	CHRD	Q9H2X0	955 aa		9.98	□□□□□ -0.81
SPIDR-215	ENST00000521798	SUV39H2	Q9H5I1	410 aa		9.98	□□□□□ -0.81
SPIDR-215	ENST00000521798	ANKIB1	Q9P2G1	1089 aa		9.98	□□□□□ -0.81
SPIDR-215	ENST00000521798	GADD45B	O75293	160 aa	Predicted RBP	9.97	□□□□□ -0.81
SPIDR-215	ENST00000521798	TAT	P17735	454 aa	Predicted RBP	9.97	□□□□□ -0.81
SPIDR-215	ENST00000521798	GSTT1	P30711	240 aa		9.97	□□□□□ -0.81
SPIDR-215	ENST00000521798	SLC27A3	Q5K4L6	730 aa		9.97	□□□□□ -0.81
SPIDR-215	ENST00000521798	KIAA0825	Q8IV33	1275 aa		9.97	□□□□□ -0.81
SPIDR-215	ENST00000521798	CMTR1	Q8N1G2	835 aa	Known RBP	9.97	□□□□□ -0.81
SPIDR-215	ENST00000521798	CHMP4A	Q9BY43	222 aa		9.97	□□□□□ -0.81
SPIDR-215	ENST00000521798	ZFAND3	Q9H8U3	227 aa		9.97	□□□□□ -0.81
SPIDR-215	ENST00000521798	NEUROD4	Q9HD90	331 aa		9.97	□□□□□ -0.81
SPIDR-215	ENST00000521798	PZP	P20742	1482 aa		9.97	□□□□□ -0.81
SPIDR-215	ENST00000521798	VWDE	Q8N2E2	1590 aa		9.97	□□□□□ -0.81
SPIDR-215	ENST00000521798	ZC3H13	Q5T200	1668 aa	Known RBP	9.96	□□□□□ -0.81
SPIDR-215	ENST00000521798	SETD1B	Q9UPS6	1966 aa	Known RBP	9.96	□□□□□ -0.81
SPIDR-215	ENST00000521798		K7ELQ4	463 aa	Predicted RBP	9.96	□□□□□ -0.82
SPIDR-215	ENST00000521798	POLR3D	P05423	398 aa	Predicted RBP	9.96	□□□□□ -0.82

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