RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 APLP1P51693 650 aa12.94□□□□□ -0.34
TRIM35-204ENST00000521283 DSG2Q14126 1118 aa12.94□□□□□ -0.34
TRIM35-204ENST00000521283 GCKRQ14397 625 aa12.94□□□□□ -0.34
TRIM35-204ENST00000521283 ALDH1L2Q3SY69 923 aa12.94□□□□□ -0.34
TRIM35-204ENST00000521283 G2E3Q7L622 706 aa12.94□□□□□ -0.34
TRIM35-204ENST00000521283 PNMA8AQ86V59 439 aaPredicted RBP12.94□□□□□ -0.34
TRIM35-204ENST00000521283 PLPP6Q8IY26 295 aa12.94□□□□□ -0.34
TRIM35-204ENST00000521283 PTPRCP08575 1304 aa12.93□□□□□ -0.34
TRIM35-204ENST00000521283 TCERG1O14776 1098 aaKnown RBP12.93□□□□□ -0.34
TRIM35-204ENST00000521283 CTSWP56202 376 aa12.93□□□□□ -0.34
TRIM35-204ENST00000521283 KIAA2012Q0VF49 1180 aa12.93□□□□□ -0.34
TRIM35-204ENST00000521283 RTL5Q5HYW3 569 aaPredicted RBP12.93□□□□□ -0.34
TRIM35-204ENST00000521283 OLFM4Q6UX06 510 aa12.93□□□□□ -0.34
TRIM35-204ENST00000521283 ANKRD18AQ8IVF6 992 aa12.93□□□□□ -0.34
TRIM35-204ENST00000521283 PODXL2Q9NZ53 605 aa12.93□□□□□ -0.34
TRIM35-204ENST00000521283 ZNRF3Q9ULT6 936 aa12.93□□□□□ -0.34
TRIM35-204ENST00000521283 ALDH1L1O75891 902 aa12.92□□□□□ -0.34
TRIM35-204ENST00000521283 DDNO94850 711 aaPredicted RBP12.92□□□□□ -0.34
TRIM35-204ENST00000521283 TNIP1Q15025 636 aa12.92□□□□□ -0.34
TRIM35-204ENST00000521283 CWF19L2Q2TBE0 894 aaKnown RBP12.92□□□□□ -0.34
TRIM35-204ENST00000521283 CELF1Q92879 486 aaKnown RBP12.92□□□□□ -0.34
TRIM35-204ENST00000521283 HACL1Q9UJ83 578 aa12.92□□□□□ -0.34
TRIM35-204ENST00000521283 NSFL1CQ9UNZ2 370 aaKnown RBP12.92□□□□□ -0.34
TRIM35-204ENST00000521283 TAF1P21675 1872 aa12.91□□□□□ -0.34
TRIM35-204ENST00000521283 LMOD1P29536 600 aaPredicted RBP12.91□□□□□ -0.34
TRIM35-204ENST00000521283 WASHC4Q2M389 1173 aa12.91□□□□□ -0.34
TRIM35-204ENST00000521283 UBE3BQ7Z3V4 1068 aa12.91□□□□□ -0.34
TRIM35-204ENST00000521283 TRMT2AQ8IZ69 625 aaKnown RBP12.91□□□□□ -0.34
TRIM35-204ENST00000521283 TTLL11Q8NHH1 800 aa12.91□□□□□ -0.34
TRIM35-204ENST00000521283 PTCD2Q8WV60 388 aaKnown RBP12.91□□□□□ -0.34
TRIM35-204ENST00000521283 BSDC1Q9NW68 430 aaPredicted RBP12.91□□□□□ -0.34
TRIM35-204ENST00000521283 LHX6Q9UPM6 363 aa12.91□□□□□ -0.34
TRIM35-204ENST00000521283 POTECB2RU33 542 aa12.9□□□□□ -0.34
TRIM35-204ENST00000521283 IGHMBP2P38935 993 aaKnown RBP12.9□□□□□ -0.34
TRIM35-204ENST00000521283 AOC3Q16853 763 aa12.9□□□□□ -0.34
TRIM35-204ENST00000521283 BEND3Q5T5X7 828 aa12.9□□□□□ -0.34
TRIM35-204ENST00000521283 LDHDQ86WU2 507 aa12.9□□□□□ -0.34
TRIM35-204ENST00000521283 ZC3H12CQ9C0D7 883 aaKnown RBP12.9□□□□□ -0.34
TRIM35-204ENST00000521283 SRCIN1Q9C0H9 1055 aa12.9□□□□□ -0.34
TRIM35-204ENST00000521283 ANKIB1Q9P2G1 1089 aa12.9□□□□□ -0.34
TRIM35-204ENST00000521283 XDHP47989 1333 aa12.89□□□□□ -0.35
TRIM35-204ENST00000521283 C6orf229H3BNL8 230 aa12.89□□□□□ -0.35
TRIM35-204ENST00000521283 CSF1RP07333 972 aa12.89□□□□□ -0.35
TRIM35-204ENST00000521283 BRPF1P55201 1214 aaPredicted RBP12.89□□□□□ -0.35
TRIM35-204ENST00000521283 CRISPLD2Q9H0B8 497 aa12.89□□□□□ -0.35
TRIM35-204ENST00000521283 TAF1DQ9H5J8 278 aaPredicted RBP12.89□□□□□ -0.35
TRIM35-204ENST00000521283 C9orf78Q9NZ63 289 aaPredicted RBP12.89□□□□□ -0.35
TRIM35-204ENST00000521283 GGA1Q9UJY5 639 aa12.89□□□□□ -0.35
TRIM35-204ENST00000521283 HDAC5Q9UQL6 1122 aa12.89□□□□□ -0.35
TRIM35-204ENST00000521283 GRM8O00222 908 aa12.88□□□□□ -0.35
TRIM35-204ENST00000521283 ATP2B4P23634 1241 aa12.88□□□□□ -0.35
TRIM35-204ENST00000521283 EPHX2P34913 555 aa12.88□□□□□ -0.35
TRIM35-204ENST00000521283 CIAPIN1Q6FI81 312 aa12.88□□□□□ -0.35
TRIM35-204ENST00000521283 MRPL50Q8N5N7 158 aaKnown RBP12.88□□□□□ -0.35
TRIM35-204ENST00000521283 MPHOSPH8Q99549 860 aa12.88□□□□□ -0.35
TRIM35-204ENST00000521283 ANKRD2Q9GZV1 360 aa12.88□□□□□ -0.35
TRIM35-204ENST00000521283 SEC31BQ9NQW1 1179 aa12.88□□□□□ -0.35
TRIM35-204ENST00000521283 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
TRIM35-204ENST00000521283 ANKRD18BA2A2Z9 1011 aa12.87□□□□□ -0.35
TRIM35-204ENST00000521283 CASP7P55210 303 aa12.87□□□□□ -0.35
TRIM35-204ENST00000521283 GPSM2P81274 684 aa12.87□□□□□ -0.35
TRIM35-204ENST00000521283 USP50Q70EL3 339 aaPredicted RBP12.87□□□□□ -0.35
TRIM35-204ENST00000521283 TBC1D16Q8TBP0 767 aa12.87□□□□□ -0.35
TRIM35-204ENST00000521283 LEMD3Q9Y2U8 911 aa12.87□□□□□ -0.35
TRIM35-204ENST00000521283 GJA3Q9Y6H8 435 aa12.87□□□□□ -0.35
TRIM35-204ENST00000521283 LTBP1Q14766 1721 aa12.86□□□□□ -0.35
TRIM35-204ENST00000521283 F6X3S4 739 aa12.86□□□□□ -0.35
TRIM35-204ENST00000521283 ITGA6P23229 1130 aa12.86□□□□□ -0.35
TRIM35-204ENST00000521283 RPS12P25398 132 aaKnown RBP12.86□□□□□ -0.35
TRIM35-204ENST00000521283 MMP14P50281 582 aa12.86□□□□□ -0.35
TRIM35-204ENST00000521283 IFIT5Q13325 482 aaKnown RBP12.86□□□□□ -0.35
TRIM35-204ENST00000521283 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
TRIM35-204ENST00000521283 SSH1Q8WYL5 1049 aa12.86□□□□□ -0.35
TRIM35-204ENST00000521283 DPF2Q92785 391 aa12.86□□□□□ -0.35
TRIM35-204ENST00000521283 GREM2Q9H772 168 aa12.86□□□□□ -0.35
TRIM35-204ENST00000521283 POLLQ9UGP5 575 aa12.86□□□□□ -0.35
TRIM35-204ENST00000521283 DUOX1Q9NRD9 1551 aa12.86□□□□□ -0.35
TRIM35-204ENST00000521283 CXCL9Q07325 125 aa12.85□□□□□ -0.35
TRIM35-204ENST00000521283 CCDC57Q2TAC2 916 aa12.85□□□□□ -0.35
TRIM35-204ENST00000521283 PODNQ7Z5L7 613 aa12.85□□□□□ -0.35
TRIM35-204ENST00000521283 ARHGAP45Q92619 1136 aa12.85□□□□□ -0.35
TRIM35-204ENST00000521283 JARID2Q92833 1246 aaPredicted RBP12.85□□□□□ -0.35
TRIM35-204ENST00000521283 ADARB2Q9NS39 739 aaKnown RBP12.85□□□□□ -0.35
TRIM35-204ENST00000521283 SMC4Q9NTJ3 1288 aa12.85□□□□□ -0.35
TRIM35-204ENST00000521283 MINPP1Q9UNW1 487 aa12.85□□□□□ -0.35
TRIM35-204ENST00000521283 UTYO14607 1347 aa12.85□□□□□ -0.35
TRIM35-204ENST00000521283 UFL1O94874 794 aa12.84□□□□□ -0.35
TRIM35-204ENST00000521283 CCT4P50991 539 aaKnown RBP12.84□□□□□ -0.35
TRIM35-204ENST00000521283 POTEEQ6S8J3 1075 aa12.84□□□□□ -0.35
TRIM35-204ENST00000521283 ZC3H15Q8WU90 426 aaKnown RBP12.84□□□□□ -0.35
TRIM35-204ENST00000521283 CDCA7LQ96GN5 454 aa12.84□□□□□ -0.35
TRIM35-204ENST00000521283 CCDC85AQ96PX6 553 aaPredicted RBP12.84□□□□□ -0.35
TRIM35-204ENST00000521283 BCL2L13Q9BXK5 485 aa12.84□□□□□ -0.35
TRIM35-204ENST00000521283 API5Q9BZZ5 524 aaKnown RBP12.84□□□□□ -0.35
TRIM35-204ENST00000521283 GPRC5DQ9NZD1 345 aa12.84□□□□□ -0.35
TRIM35-204ENST00000521283 KIF16BQ96L93 1317 aa12.84□□□□□ -0.35
TRIM35-204ENST00000521283 COL4A5P29400 1685 aa12.83□□□□□ -0.35
TRIM35-204ENST00000521283 MED23Q9ULK4 1368 aa12.83□□□□□ -0.36
TRIM35-204ENST00000521283 H7C1D1 291 aa12.83□□□□□ -0.36
TRIM35-204ENST00000521283 IPO8O15397 1037 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms