RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 YDJCA8MPS7 323 aa13.14□□□□□ -0.31
TRAPPC9-209ENST00000521167 SCNN1DP51172 638 aa13.14□□□□□ -0.31
TRAPPC9-209ENST00000521167 IFIT5Q13325 482 aaKnown RBP13.14□□□□□ -0.31
TRAPPC9-209ENST00000521167 FAM161AQ3B820 660 aa13.14□□□□□ -0.31
TRAPPC9-209ENST00000521167 ANKRD2Q9GZV1 360 aa13.14□□□□□ -0.31
TRAPPC9-209ENST00000521167 ADAMTSL1Q8N6G6 1762 aa13.14□□□□□ -0.31
TRAPPC9-209ENST00000521167 SCN9AQ15858 1988 aa13.14□□□□□ -0.31
TRAPPC9-209ENST00000521167 G3V3G9 751 aa13.13□□□□□ -0.31
TRAPPC9-209ENST00000521167 ECE2O60344 883 aa13.13□□□□□ -0.31
TRAPPC9-209ENST00000521167 RAD17O75943 681 aa13.13□□□□□ -0.31
TRAPPC9-209ENST00000521167 POTEJP0CG39 1038 aa13.13□□□□□ -0.31
TRAPPC9-209ENST00000521167 EPS15P42566 896 aa13.13□□□□□ -0.31
TRAPPC9-209ENST00000521167 CCT4P50991 539 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-209ENST00000521167 EAPPQ56P03 285 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-209ENST00000521167 LMBR1LQ6UX01 489 aa13.13□□□□□ -0.31
TRAPPC9-209ENST00000521167 USP50Q70EL3 339 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-209ENST00000521167 BCL2L13Q9BXK5 485 aa13.13□□□□□ -0.31
TRAPPC9-209ENST00000521167 DBNDD1Q9H9R9 158 aa13.13□□□□□ -0.31
TRAPPC9-209ENST00000521167 GPRC5DQ9NZD1 345 aa13.13□□□□□ -0.31
TRAPPC9-209ENST00000521167 LEMD3Q9Y2U8 911 aa13.13□□□□□ -0.31
TRAPPC9-209ENST00000521167 POLR2AP24928 1970 aaKnown RBP13.12□□□□□ -0.31
TRAPPC9-209ENST00000521167 GMPSP49915 693 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-209ENST00000521167 RARSP54136 660 aaKnown RBP13.12□□□□□ -0.31
TRAPPC9-209ENST00000521167 HNRNPUQ00839 825 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRAPPC9-209ENST00000521167 DOK7Q18PE1 504 aa13.12□□□□□ -0.31
TRAPPC9-209ENST00000521167 CCDC57Q2TAC2 916 aa13.12□□□□□ -0.31
TRAPPC9-209ENST00000521167 EPHA10Q5JZY3 1008 aa13.12□□□□□ -0.31
TRAPPC9-209ENST00000521167 DPF2Q92785 391 aa13.12□□□□□ -0.31
TRAPPC9-209ENST00000521167 GPR101Q96P66 508 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-209ENST00000521167 ADARB2Q9NS39 739 aaKnown RBP13.12□□□□□ -0.31
TRAPPC9-209ENST00000521167 MED23Q9ULK4 1368 aa13.11□□□□□ -0.31
TRAPPC9-209ENST00000521167 PSMD14O00487 310 aa13.11□□□□□ -0.31
TRAPPC9-209ENST00000521167 NBPF7P0C2Y1 421 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC9-209ENST00000521167 RPS12P25398 132 aaKnown RBP13.11□□□□□ -0.31
TRAPPC9-209ENST00000521167 PODNQ7Z5L7 613 aa13.11□□□□□ -0.31
TRAPPC9-209ENST00000521167 DNAJC5GQ8N7S2 189 aa13.11□□□□□ -0.31
TRAPPC9-209ENST00000521167 ARHGAP45Q92619 1136 aa13.11□□□□□ -0.31
TRAPPC9-209ENST00000521167 API5Q9BZZ5 524 aaKnown RBP13.11□□□□□ -0.31
TRAPPC9-209ENST00000521167 CNOT7Q9UIV1 285 aaKnown RBP13.11□□□□□ -0.31
TRAPPC9-209ENST00000521167 NOB1Q9ULX3 412 aaKnown RBP13.11□□□□□ -0.31
TRAPPC9-209ENST00000521167 CHMP3Q9Y3E7 222 aa13.11□□□□□ -0.31
TRAPPC9-209ENST00000521167 POTEFA5A3E0 1075 aa13.1□□□□□ -0.31
TRAPPC9-209ENST00000521167 H7C1D1 291 aa13.1□□□□□ -0.31
TRAPPC9-209ENST00000521167 ITGBL1O95965 494 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC9-209ENST00000521167 VIL1P09327 827 aaKnown RBP13.1□□□□□ -0.31
TRAPPC9-209ENST00000521167 CHRNDQ07001 517 aa13.1□□□□□ -0.31
TRAPPC9-209ENST00000521167 CNTROBQ8N137 903 aa13.1□□□□□ -0.31
TRAPPC9-209ENST00000521167 KAZALD1Q96I82 304 aa13.1□□□□□ -0.31
TRAPPC9-209ENST00000521167 SUCLG2Q96I99 432 aa13.1□□□□□ -0.31
TRAPPC9-209ENST00000521167 USP44Q9H0E7 712 aa13.1□□□□□ -0.31
TRAPPC9-209ENST00000521167 PCDHB8Q9UN66 801 aa13.1□□□□□ -0.31
TRAPPC9-209ENST00000521167 CEP350Q5VT06 3117 aa13.1□□□□□ -0.31
TRAPPC9-209ENST00000521167 TRPM7Q96QT4 1865 aa13.1□□□□□ -0.31
TRAPPC9-209ENST00000521167 ZNF804BA4D1E1 1349 aa13.1□□□□□ -0.31
TRAPPC9-209ENST00000521167 PASKQ96RG2 1323 aa13.1□□□□□ -0.31
TRAPPC9-209ENST00000521167 A0A1B0GUL6 1792 aa13.09□□□□□ -0.31
TRAPPC9-209ENST00000521167 RABL6Q3YEC7 729 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC9-209ENST00000521167 TAF7LQ5H9L4 462 aa13.09□□□□□ -0.31
TRAPPC9-209ENST00000521167 IER5LQ5T953 404 aa13.09□□□□□ -0.31
TRAPPC9-209ENST00000521167 ZC3H15Q8WU90 426 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-209ENST00000521167 TMEM106CQ9BVX2 250 aa13.09□□□□□ -0.31
TRAPPC9-209ENST00000521167 KCNQ5Q9NR82 932 aa13.09□□□□□ -0.31
TRAPPC9-209ENST00000521167 WTIPA6NIX2 430 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC9-209ENST00000521167 IPO8O15397 1037 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-209ENST00000521167 LDHAL6AQ6ZMR3 332 aa13.08□□□□□ -0.32
TRAPPC9-209ENST00000521167 ZNF467Q7Z7K2 595 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC9-209ENST00000521167 AGBL3Q8NEM8 1001 aa13.08□□□□□ -0.32
TRAPPC9-209ENST00000521167 OTUD5Q96G74 571 aa13.08□□□□□ -0.32
TRAPPC9-209ENST00000521167 COA1Q9GZY4 146 aa13.08□□□□□ -0.32
TRAPPC9-209ENST00000521167 PGAP2Q9UHJ9 254 aa13.08□□□□□ -0.32
TRAPPC9-209ENST00000521167 HDAC5Q9UQL6 1122 aa13.08□□□□□ -0.32
TRAPPC9-209ENST00000521167 KIF16BQ96L93 1317 aa13.08□□□□□ -0.32
TRAPPC9-209ENST00000521167 ZNF609O15014 1411 aa13.07□□□□□ -0.32
TRAPPC9-209ENST00000521167 USP17L3A6NCW0 530 aa13.07□□□□□ -0.32
TRAPPC9-209ENST00000521167 USP17L4A6NCW7 530 aa13.07□□□□□ -0.32
TRAPPC9-209ENST00000521167 KCNJ4P48050 445 aa13.07□□□□□ -0.32
TRAPPC9-209ENST00000521167 MAP1SQ66K74 1059 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-209ENST00000521167 C15orf52Q6ZUT6 534 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-209ENST00000521167 USP17L1Q7RTZ2 530 aa13.07□□□□□ -0.32
TRAPPC9-209ENST00000521167 MICALL2Q8IY33 904 aa13.07□□□□□ -0.32
TRAPPC9-209ENST00000521167 KLRG1Q96E93 195 aa13.07□□□□□ -0.32
TRAPPC9-209ENST00000521167 ZNF594Q96JF6 807 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-209ENST00000521167 BICC1Q9H694 974 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-209ENST00000521167 CNNM1Q9NRU3 951 aa13.07□□□□□ -0.32
TRAPPC9-209ENST00000521167 ZBED9Q6R2W3 1325 aa13.07□□□□□ -0.32
TRAPPC9-209ENST00000521167 HTRA3P83110 453 aa13.06□□□□□ -0.32
TRAPPC9-209ENST00000521167 RSBN1LQ6PCB5 846 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC9-209ENST00000521167 ANKRD44Q8N8A2 993 aa13.06□□□□□ -0.32
TRAPPC9-209ENST00000521167 TMEM88BA6NKF7 163 aa13.05□□□□□ -0.32
TRAPPC9-209ENST00000521167 TAF5LO75529 589 aa13.05□□□□□ -0.32
TRAPPC9-209ENST00000521167 MMP14P50281 582 aa13.05□□□□□ -0.32
TRAPPC9-209ENST00000521167 HIRAP54198 1017 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-209ENST00000521167 STRIP1Q5VSL9 837 aa13.05□□□□□ -0.32
TRAPPC9-209ENST00000521167 INTS3Q68E01 1043 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-209ENST00000521167 TXNRD3Q86VQ6 643 aa13.05□□□□□ -0.32
TRAPPC9-209ENST00000521167 HELBQ8NG08 1087 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-209ENST00000521167 GMLQ99445 158 aa13.05□□□□□ -0.32
TRAPPC9-209ENST00000521167 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-209ENST00000521167 RIPOR2Q9Y4F9 1068 aa13.05□□□□□ -0.32
TRAPPC9-209ENST00000521167 SHTN1A0MZ66 631 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms