RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 APBB1O00213 710 aa18.92■□□□□ 0.62
LSM1-203ENST00000520755 VPS33BQ9H267 617 aa18.92■□□□□ 0.62
LSM1-203ENST00000520755 SMARCA5O60264 1052 aaPredicted RBP18.91■□□□□ 0.62
LSM1-203ENST00000520755 PDE8BO95263 885 aa18.91■□□□□ 0.62
LSM1-203ENST00000520755 KLRK1P26718 216 aa18.91■□□□□ 0.62
LSM1-203ENST00000520755 NIM1KQ8IY84 436 aa18.91■□□□□ 0.62
LSM1-203ENST00000520755 RHPN1Q8TCX5 695 aa18.91■□□□□ 0.62
LSM1-203ENST00000520755 JDP2Q8WYK2 163 aa18.91■□□□□ 0.62
LSM1-203ENST00000520755 CEP126Q9P2H0 1117 aa18.91■□□□□ 0.62
LSM1-203ENST00000520755 MED23Q9ULK4 1368 aa18.91■□□□□ 0.62
LSM1-203ENST00000520755 ZNF646O15015 1829 aaPredicted RBP18.9■□□□□ 0.62
LSM1-203ENST00000520755 G3V3G9 751 aa18.9■□□□□ 0.62
LSM1-203ENST00000520755 RAB11FIP3O75154 756 aa18.9■□□□□ 0.62
LSM1-203ENST00000520755 TFCP2Q12800 502 aa18.9■□□□□ 0.62
LSM1-203ENST00000520755 DOK7Q18PE1 504 aa18.9■□□□□ 0.62
LSM1-203ENST00000520755 DCAF8Q5TAQ9 597 aa18.9■□□□□ 0.62
LSM1-203ENST00000520755 DBNDD1Q9H9R9 158 aa18.9■□□□□ 0.62
LSM1-203ENST00000520755 UBE4AQ14139 1066 aa18.89■□□□□ 0.61
LSM1-203ENST00000520755 PUM3Q15397 648 aaKnown RBP18.89■□□□□ 0.61
LSM1-203ENST00000520755 HSP90AB4PQ58FF6 505 aa18.89■□□□□ 0.61
LSM1-203ENST00000520755 TXNRD3Q86VQ6 643 aa18.89■□□□□ 0.61
LSM1-203ENST00000520755 ERC1Q8IUD2 1116 aa18.89■□□□□ 0.61
LSM1-203ENST00000520755 KIF1BPQ96EK5 621 aa18.89■□□□□ 0.61
LSM1-203ENST00000520755 AKAP11Q9UKA4 1901 aa18.89■□□□□ 0.61
LSM1-203ENST00000520755 NUCB1Q02818 461 aa18.88■□□□□ 0.61
LSM1-203ENST00000520755 LRRCC1Q9C099 1032 aa18.88■□□□□ 0.61
LSM1-203ENST00000520755 IL1RAPL2Q9NP60 686 aa18.88■□□□□ 0.61
LSM1-203ENST00000520755 AK9Q5TCS8 1911 aa18.88■□□□□ 0.61
LSM1-203ENST00000520755 SCN9AQ15858 1988 aa18.88■□□□□ 0.61
LSM1-203ENST00000520755 ECE2O60344 883 aa18.87■□□□□ 0.61
LSM1-203ENST00000520755 PSME4Q14997 1843 aa18.87■□□□□ 0.61
LSM1-203ENST00000520755 ATP2B3Q16720 1220 aa18.87■□□□□ 0.61
LSM1-203ENST00000520755 SKAP1Q86WV1 359 aa18.87■□□□□ 0.61
LSM1-203ENST00000520755 ZC3H4Q9UPT8 1303 aaKnown RBP18.87■□□□□ 0.61
LSM1-203ENST00000520755 IRS2Q9Y4H2 1338 aa18.86■□□□□ 0.61
LSM1-203ENST00000520755 SLC5A1P13866 664 aa18.86■□□□□ 0.61
LSM1-203ENST00000520755 FGFR2P21802 821 aa18.86■□□□□ 0.61
LSM1-203ENST00000520755 YY1P25490 414 aa18.86■□□□□ 0.61
LSM1-203ENST00000520755 ANKRD45Q5TZF3 282 aa18.86■□□□□ 0.61
LSM1-203ENST00000520755 LPIN2Q92539 896 aa18.86■□□□□ 0.61
LSM1-203ENST00000520755 ZNRF3Q9ULT6 936 aa18.86■□□□□ 0.61
LSM1-203ENST00000520755 MYO5AQ9Y4I1 1855 aaKnown RBP18.86■□□□□ 0.61
LSM1-203ENST00000520755 SALL3Q9BXA9 1300 aa18.85■□□□□ 0.61
LSM1-203ENST00000520755 ZNF541Q9H0D2 1346 aa18.85■□□□□ 0.61
LSM1-203ENST00000520755 FZD9O00144 591 aa18.85■□□□□ 0.61
LSM1-203ENST00000520755 IFIT1P09914 478 aaKnown RBP18.85■□□□□ 0.61
LSM1-203ENST00000520755 PDE4AP27815 886 aa18.85■□□□□ 0.61
LSM1-203ENST00000520755 GYG1P46976 350 aa18.85■□□□□ 0.61
LSM1-203ENST00000520755 EIF6P56537 245 aaKnown RBP18.85■□□□□ 0.61
LSM1-203ENST00000520755 TNNI3KQ59H18 835 aa18.85■□□□□ 0.61
LSM1-203ENST00000520755 C15orf52Q6ZUT6 534 aaKnown RBP18.85■□□□□ 0.61
LSM1-203ENST00000520755 CHD1LQ86WJ1 897 aa18.85■□□□□ 0.61
LSM1-203ENST00000520755 EAF2Q96CJ1 260 aaPredicted RBP18.85■□□□□ 0.61
LSM1-203ENST00000520755 LNPKQ9C0E8 428 aa18.85■□□□□ 0.61
LSM1-203ENST00000520755 AKAP2Q9Y2D5 859 aa18.85■□□□□ 0.61
LSM1-203ENST00000520755 FPGT-TNNI3KV9GXZ4 949 aa18.85■□□□□ 0.61
LSM1-203ENST00000520755 YDJCA8MPS7 323 aa18.84■□□□□ 0.61
LSM1-203ENST00000520755 ZNF804AQ7Z570 1209 aa18.84■□□□□ 0.61
LSM1-203ENST00000520755 OTUD7AQ8TE49 926 aaPredicted RBP18.84■□□□□ 0.61
LSM1-203ENST00000520755 COA1Q9GZY4 146 aa18.84■□□□□ 0.61
LSM1-203ENST00000520755 GPR108Q9NPR9 543 aa18.84■□□□□ 0.61
LSM1-203ENST00000520755 TLR7Q9NYK1 1049 aaKnown RBP18.84■□□□□ 0.61
LSM1-203ENST00000520755 A0A1B0GUL7 405 aa18.83■□□□□ 0.6
LSM1-203ENST00000520755 RAD17O75943 681 aa18.83■□□□□ 0.6
LSM1-203ENST00000520755 TIMM10P62072 90 aa18.83■□□□□ 0.6
LSM1-203ENST00000520755 VPS37DQ86XT2 251 aa18.83■□□□□ 0.6
LSM1-203ENST00000520755 C16orf71Q8IYS4 520 aaPredicted RBP18.83■□□□□ 0.6
LSM1-203ENST00000520755 ZNF526Q8TF50 670 aaPredicted RBP18.83■□□□□ 0.6
LSM1-203ENST00000520755 NEUROD6Q96NK8 337 aa18.83■□□□□ 0.6
LSM1-203ENST00000520755 BCL11AQ9H165 835 aa18.83■□□□□ 0.6
LSM1-203ENST00000520755 DOCK2Q92608 1830 aa18.82■□□□□ 0.6
LSM1-203ENST00000520755 HIBADHP31937 336 aaKnown RBP18.82■□□□□ 0.6
LSM1-203ENST00000520755 CXCL9Q07325 125 aa18.82■□□□□ 0.6
LSM1-203ENST00000520755 CAVIN4Q5BKX8 364 aa18.82■□□□□ 0.6
LSM1-203ENST00000520755 DPY19L2Q6NUT2 758 aa18.82■□□□□ 0.6
LSM1-203ENST00000520755 FAM84BQ96KN1 310 aaPredicted RBP18.82■□□□□ 0.6
LSM1-203ENST00000520755 CD209Q9NNX6 404 aa18.82■□□□□ 0.6
LSM1-203ENST00000520755 KCNQ5Q9NR82 932 aa18.82■□□□□ 0.6
LSM1-203ENST00000520755 DBNLQ9UJU6 430 aaKnown RBP18.82■□□□□ 0.6
LSM1-203ENST00000520755 GJA3Q9Y6H8 435 aa18.82■□□□□ 0.6
LSM1-203ENST00000520755 MYH7P12883 1935 aa18.82■□□□□ 0.6
LSM1-203ENST00000520755 ADORA1P30542 326 aa18.81■□□□□ 0.6
LSM1-203ENST00000520755 CIAPIN1Q6FI81 312 aa18.81■□□□□ 0.6
LSM1-203ENST00000520755 PODNQ7Z5L7 613 aa18.81■□□□□ 0.6
LSM1-203ENST00000520755 AACSQ86V21 672 aa18.81■□□□□ 0.6
LSM1-203ENST00000520755 CLASRPQ8N2M8 674 aaKnown RBP18.81■□□□□ 0.6
LSM1-203ENST00000520755 FBXW7Q969H0 707 aa18.81■□□□□ 0.6
LSM1-203ENST00000520755 GLTPD2A6NH11 291 aa18.8■□□□□ 0.6
LSM1-203ENST00000520755 DDNO94850 711 aaPredicted RBP18.8■□□□□ 0.6
LSM1-203ENST00000520755 BCAMP50895 628 aa18.8■□□□□ 0.6
LSM1-203ENST00000520755 FBXO33Q7Z6M2 555 aa18.8■□□□□ 0.6
LSM1-203ENST00000520755 XAGE2Q96GT9 111 aa18.8■□□□□ 0.6
LSM1-203ENST00000520755 DBNDD2Q9BQY9 259 aa18.8■□□□□ 0.6
LSM1-203ENST00000520755 CCDC8Q9H0W5 538 aaPredicted RBP18.8■□□□□ 0.6
LSM1-203ENST00000520755 PSMD14O00487 310 aa18.79■□□□□ 0.6
LSM1-203ENST00000520755 IL1R1P14778 569 aa18.79■□□□□ 0.6
LSM1-203ENST00000520755 TNIP1Q15025 636 aa18.79■□□□□ 0.6
LSM1-203ENST00000520755 IQSEC3Q9UPP2 1182 aaPredicted RBP18.79■□□□□ 0.6
LSM1-203ENST00000520755 COL1A1P02452 1464 aaPredicted RBP18.78■□□□□ 0.6
LSM1-203ENST00000520755 WDR90Q96KV7 1748 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms