RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 PCCAP05165 728 aaPredicted RBP11.9□□□□□ -0.5
MCF2-209ENST00000520602 GIGYF2Q6Y7W6 1299 aaKnown RBP11.9□□□□□ -0.5
MCF2-209ENST00000520602 CREBRFQ8IUR6 639 aa11.9□□□□□ -0.5
MCF2-209ENST00000520602 UBAC1Q9BSL1 405 aa11.9□□□□□ -0.5
MCF2-209ENST00000520602 MTMR6Q9Y217 621 aa11.9□□□□□ -0.5
MCF2-209ENST00000520602 MAP3K15Q6ZN16 1313 aa11.9□□□□□ -0.5
MCF2-209ENST00000520602 DDIT3P35638 169 aa11.9□□□□□ -0.5
MCF2-209ENST00000520602 KCNQ4P56696 695 aa11.9□□□□□ -0.5
MCF2-209ENST00000520602 CAVIN4Q5BKX8 364 aa11.9□□□□□ -0.5
MCF2-209ENST00000520602 MIGA1Q8NAN2 632 aa11.9□□□□□ -0.5
MCF2-209ENST00000520602 UBAP1LF5GYI3 381 aa11.9□□□□□ -0.51
MCF2-209ENST00000520602 GPAA1O43292 621 aa11.9□□□□□ -0.51
MCF2-209ENST00000520602 HSPD1P10809 573 aaKnown RBP11.9□□□□□ -0.51
MCF2-209ENST00000520602 CCDC24Q8N4L8 307 aa11.9□□□□□ -0.51
MCF2-209ENST00000520602 RASSF8Q8NHQ8 419 aa11.9□□□□□ -0.51
MCF2-209ENST00000520602 PIBF1Q8WXW3 757 aa11.9□□□□□ -0.51
MCF2-209ENST00000520602 NOL10Q9BSC4 688 aaKnown RBP11.9□□□□□ -0.51
MCF2-209ENST00000520602 ATG3Q9NT62 314 aa11.9□□□□□ -0.51
MCF2-209ENST00000520602 PXDNLA1KZ92 1463 aa11.89□□□□□ -0.51
MCF2-209ENST00000520602 FAM98CQ17RN3 349 aaKnown RBP11.89□□□□□ -0.51
MCF2-209ENST00000520602 MAGEB6Q8N7X4 407 aa11.89□□□□□ -0.51
MCF2-209ENST00000520602 CDC5LQ99459 802 aaKnown RBP11.89□□□□□ -0.51
MCF2-209ENST00000520602 MST1RQ04912 1400 aa11.89□□□□□ -0.51
MCF2-209ENST00000520602 SETD1AO15047 1707 aaKnown RBP11.89□□□□□ -0.51
MCF2-209ENST00000520602 CTSWP56202 376 aa11.89□□□□□ -0.51
MCF2-209ENST00000520602 TMEM67Q5HYA8 995 aa11.89□□□□□ -0.51
MCF2-209ENST00000520602 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.89□□□□□ -0.51
MCF2-209ENST00000520602 TRIM22Q8IYM9 498 aa11.89□□□□□ -0.51
MCF2-209ENST00000520602 E7EWF7 191 aa11.89□□□□□ -0.51
MCF2-209ENST00000520602 APPBP2Q92624 585 aa11.89□□□□□ -0.51
MCF2-209ENST00000520602 CCDC87Q9NVE4 849 aa11.89□□□□□ -0.51
MCF2-209ENST00000520602 ADCY5O95622 1261 aa11.88□□□□□ -0.51
MCF2-209ENST00000520602 FOXO4P98177 505 aa11.88□□□□□ -0.51
MCF2-209ENST00000520602 SLC4A8Q2Y0W8 1093 aa11.88□□□□□ -0.51
MCF2-209ENST00000520602 OTUD7BQ6GQQ9 843 aa11.88□□□□□ -0.51
MCF2-209ENST00000520602 ZNF830Q96NB3 372 aaPredicted RBP11.88□□□□□ -0.51
MCF2-209ENST00000520602 KDM6AO15550 1401 aaPredicted RBP11.88□□□□□ -0.51
MCF2-209ENST00000520602 TOM1O60784 492 aa11.88□□□□□ -0.51
MCF2-209ENST00000520602 CDKL5O76039 1030 aa11.88□□□□□ -0.51
MCF2-209ENST00000520602 SLC12A7Q9Y666 1083 aa11.88□□□□□ -0.51
MCF2-209ENST00000520602 NLRP10Q86W26 655 aa11.88□□□□□ -0.51
MCF2-209ENST00000520602 FSIP1Q8NA03 581 aa11.88□□□□□ -0.51
MCF2-209ENST00000520602 TTC14Q96N46 770 aa11.88□□□□□ -0.51
MCF2-209ENST00000520602 GOLGA8AA7E2F4 631 aa11.87□□□□□ -0.51
MCF2-209ENST00000520602 RANBP6O60518 1105 aaKnown RBP11.87□□□□□ -0.51
MCF2-209ENST00000520602 CYP7A1P22680 504 aa11.87□□□□□ -0.51
MCF2-209ENST00000520602 METAP2P50579 478 aaKnown RBP eCLIP11.87□□□□□ -0.51
MCF2-209ENST00000520602 ANKRD18AQ8IVF6 992 aa11.87□□□□□ -0.51
MCF2-209ENST00000520602 CCAR1Q8IX12 1150 aaKnown RBP11.87□□□□□ -0.51
MCF2-209ENST00000520602 BCL11BQ9C0K0 894 aaPredicted RBP11.87□□□□□ -0.51
MCF2-209ENST00000520602 TMX4Q9H1E5 349 aaPredicted RBP11.87□□□□□ -0.51
MCF2-209ENST00000520602 ZSCAN16Q9H4T2 348 aaPredicted RBP11.87□□□□□ -0.51
MCF2-209ENST00000520602 SNAP23O00161 211 aa11.87□□□□□ -0.51
MCF2-209ENST00000520602 NBPF5PQ86XG9 351 aaPredicted RBP11.87□□□□□ -0.51
MCF2-209ENST00000520602 TAF6LQ9Y6J9 622 aa11.87□□□□□ -0.51
MCF2-209ENST00000520602 RABL6Q3YEC7 729 aaPredicted RBP11.87□□□□□ -0.51
MCF2-209ENST00000520602 MFSD6Q6ZSS7 791 aa11.87□□□□□ -0.51
MCF2-209ENST00000520602 AMOTL1Q8IY63 956 aa11.87□□□□□ -0.51
MCF2-209ENST00000520602 JAG2Q9Y219 1238 aa11.87□□□□□ -0.51
MCF2-209ENST00000520602 SLC4A4Q9Y6R1 1079 aa11.87□□□□□ -0.51
MCF2-209ENST00000520602 B4E1Z4 1266 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 MBD4O95243 580 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 CYP2E1P05181 493 aaPredicted RBP11.86□□□□□ -0.51
MCF2-209ENST00000520602 PUM3Q15397 648 aaKnown RBP11.86□□□□□ -0.51
MCF2-209ENST00000520602 ZNF592Q92610 1267 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 GTF3C6Q969F1 213 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 CCDC34Q96HJ3 373 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 DSCC1Q9BVC3 393 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 DDX19AQ9NUU7 478 aaKnown RBP11.86□□□□□ -0.51
MCF2-209ENST00000520602 FGAP02671 866 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 PHKA1P46020 1223 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 SMARCC1Q92922 1105 aaPredicted RBP11.86□□□□□ -0.51
MCF2-209ENST00000520602 OSBP2Q969R2 916 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 ANKIB1Q9P2G1 1089 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 MAST3O60307 1309 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
MCF2-209ENST00000520602 LOC102724428A0A0B4J2F2 783 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 RAD21O60216 631 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 IARSP41252 1262 aaKnown RBP11.86□□□□□ -0.51
MCF2-209ENST00000520602 SIK1P57059 783 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 ZMYM1Q5SVZ6 1142 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 ZKSCAN3Q9BRR0 538 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 UTYO14607 1347 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 ZNF532Q9HCE3 1301 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 NCOA3Q9Y6Q9 1424 aa11.86□□□□□ -0.51
MCF2-209ENST00000520602 RFX5P48382 616 aaPredicted RBP11.85□□□□□ -0.51
MCF2-209ENST00000520602 ATG9AQ7Z3C6 839 aa11.85□□□□□ -0.51
MCF2-209ENST00000520602 SLC26A6Q9BXS9 759 aa11.85□□□□□ -0.51
MCF2-209ENST00000520602 NAT10Q9H0A0 1025 aaKnown RBP11.85□□□□□ -0.51
MCF2-209ENST00000520602 FAM13BQ9NYF5 915 aa11.85□□□□□ -0.51
MCF2-209ENST00000520602 M0R2C6 588 aa11.85□□□□□ -0.51
MCF2-209ENST00000520602 CIAO1O76071 339 aa11.85□□□□□ -0.51
MCF2-209ENST00000520602 CCDC102BQ68D86 513 aa11.85□□□□□ -0.51
MCF2-209ENST00000520602 TTLL11Q8NHH1 800 aa11.85□□□□□ -0.51
MCF2-209ENST00000520602 SETDB2Q96T68 719 aa11.85□□□□□ -0.51
MCF2-209ENST00000520602 ARMT1Q9H993 441 aa11.85□□□□□ -0.51
MCF2-209ENST00000520602 GPR108Q9NPR9 543 aa11.85□□□□□ -0.51
MCF2-209ENST00000520602 SEC31BQ9NQW1 1179 aa11.85□□□□□ -0.51
MCF2-209ENST00000520602 CLCN1P35523 988 aa11.85□□□□□ -0.51
MCF2-209ENST00000520602 CRKLP46109 303 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms