RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 NSFL1CQ9UNZ2 370 aaKnown RBP10.91□□□□□ -0.66
CSMD1-208ENST00000520561 LTBP1Q14766 1721 aa10.91□□□□□ -0.66
CSMD1-208ENST00000520561 CCDC102BQ68D86 513 aa10.9□□□□□ -0.66
CSMD1-208ENST00000520561 CC2D2BQ6DHV5 1058 aa10.9□□□□□ -0.66
CSMD1-208ENST00000520561 CASC1Q6TDU7 716 aa10.9□□□□□ -0.66
CSMD1-208ENST00000520561 DPP8Q6V1X1 898 aaPredicted RBP10.9□□□□□ -0.66
CSMD1-208ENST00000520561 VPS37DQ86XT2 251 aa10.9□□□□□ -0.66
CSMD1-208ENST00000520561 MPNDQ8N594 471 aa10.9□□□□□ -0.66
CSMD1-208ENST00000520561 RILPL2Q969X0 211 aa10.9□□□□□ -0.66
CSMD1-208ENST00000520561 DNAJC2Q99543 621 aaKnown RBP10.9□□□□□ -0.66
CSMD1-208ENST00000520561 GNL3LQ9NVN8 582 aaKnown RBP10.9□□□□□ -0.66
CSMD1-208ENST00000520561 PODXL2Q9NZ53 605 aa10.9□□□□□ -0.66
CSMD1-208ENST00000520561 MED23Q9ULK4 1368 aa10.9□□□□□ -0.67
CSMD1-208ENST00000520561 SLX4Q8IY92 1834 aa10.89□□□□□ -0.67
CSMD1-208ENST00000520561 A0A0G2JLW4 131 aa10.89□□□□□ -0.67
CSMD1-208ENST00000520561 SNAP23O00161 211 aa10.89□□□□□ -0.67
CSMD1-208ENST00000520561 CDC45O75419 566 aa10.89□□□□□ -0.67
CSMD1-208ENST00000520561 SDSP20132 328 aa10.89□□□□□ -0.67
CSMD1-208ENST00000520561 ARID4AP29374 1257 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-208ENST00000520561 PHKA1P46020 1223 aa10.89□□□□□ -0.67
CSMD1-208ENST00000520561 GRIPAP1Q4V328 841 aa10.89□□□□□ -0.67
CSMD1-208ENST00000520561 CCDC93Q567U6 631 aa10.89□□□□□ -0.67
CSMD1-208ENST00000520561 SOGA3Q5TF21 947 aa10.89□□□□□ -0.67
CSMD1-208ENST00000520561 EVI5LQ96CN4 794 aa10.89□□□□□ -0.67
CSMD1-208ENST00000520561 ZNF512BQ96KM6 892 aaPredicted RBP10.89□□□□□ -0.67
CSMD1-208ENST00000520561 HAUS7Q99871 368 aa10.89□□□□□ -0.67
CSMD1-208ENST00000520561 PIM2Q9P1W9 311 aa10.89□□□□□ -0.67
CSMD1-208ENST00000520561 AK9Q5TCS8 1911 aa10.89□□□□□ -0.67
CSMD1-208ENST00000520561 DUOX1Q9NRD9 1551 aa10.89□□□□□ -0.67
CSMD1-208ENST00000520561 RFX7Q2KHR2 1363 aa10.89□□□□□ -0.67
CSMD1-208ENST00000520561 C6orf229H3BNL8 230 aa10.88□□□□□ -0.67
CSMD1-208ENST00000520561 MAP4K4O95819 1239 aaPredicted RBP10.88□□□□□ -0.67
CSMD1-208ENST00000520561 ZNF804AQ7Z570 1209 aa10.88□□□□□ -0.67
CSMD1-208ENST00000520561 SLC51AQ86UW1 340 aa10.88□□□□□ -0.67
CSMD1-208ENST00000520561 TBC1D16Q8TBP0 767 aa10.88□□□□□ -0.67
CSMD1-208ENST00000520561 EYA3Q99504 573 aa10.88□□□□□ -0.67
CSMD1-208ENST00000520561 FSD1Q9BTV5 496 aa10.88□□□□□ -0.67
CSMD1-208ENST00000520561 ZNF219Q9P2Y4 722 aaPredicted RBP10.88□□□□□ -0.67
CSMD1-208ENST00000520561 BRCA1P38398 1863 aaKnown RBP10.87□□□□□ -0.67
CSMD1-208ENST00000520561 SOCS7O14512 581 aa10.87□□□□□ -0.67
CSMD1-208ENST00000520561 SEMA3EO15041 775 aa10.87□□□□□ -0.67
CSMD1-208ENST00000520561 EIF5BO60841 1220 aaKnown RBP10.87□□□□□ -0.67
CSMD1-208ENST00000520561 FRAT2O75474 233 aaPredicted RBP10.87□□□□□ -0.67
CSMD1-208ENST00000520561 KLRK1P26718 216 aa10.87□□□□□ -0.67
CSMD1-208ENST00000520561 HIBADHP31937 336 aaKnown RBP10.87□□□□□ -0.67
CSMD1-208ENST00000520561 GYG1P46976 350 aa10.87□□□□□ -0.67
CSMD1-208ENST00000520561 BCAMP50895 628 aa10.87□□□□□ -0.67
CSMD1-208ENST00000520561 DALRD3Q5D0E6 543 aaKnown RBP10.87□□□□□ -0.67
CSMD1-208ENST00000520561 C15orf52Q6ZUT6 534 aaKnown RBP10.87□□□□□ -0.67
CSMD1-208ENST00000520561 SUPT20HQ8NEM7 779 aa10.87□□□□□ -0.67
CSMD1-208ENST00000520561 PAG1Q9NWQ8 432 aa10.87□□□□□ -0.67
CSMD1-208ENST00000520561 MYH13Q9UKX3 1938 aa10.86□□□□□ -0.67
CSMD1-208ENST00000520561 HIP1O00291 1037 aa10.86□□□□□ -0.67
CSMD1-208ENST00000520561 GOLIM4O00461 696 aa10.86□□□□□ -0.67
CSMD1-208ENST00000520561 C21orf2O43822 256 aa10.86□□□□□ -0.67
CSMD1-208ENST00000520561 KCNA3P22001 575 aa10.86□□□□□ -0.67
CSMD1-208ENST00000520561 MCAMP43121 646 aa10.86□□□□□ -0.67
CSMD1-208ENST00000520561 FKBP4Q02790 459 aaKnown RBP eCLIP10.86□□□□□ -0.67
CSMD1-208ENST00000520561 TTF1Q15361 905 aaPredicted RBP10.86□□□□□ -0.67
CSMD1-208ENST00000520561 LRRFIP1Q32MZ4 808 aaKnown RBP10.86□□□□□ -0.67
CSMD1-208ENST00000520561 C8orf34Q49A92 452 aa10.86□□□□□ -0.67
CSMD1-208ENST00000520561 OLFM4Q6UX06 510 aa10.86□□□□□ -0.67
CSMD1-208ENST00000520561 RTKN2Q8IZC4 609 aa10.86□□□□□ -0.67
CSMD1-208ENST00000520561 C7orf43Q8WVR3 580 aa10.86□□□□□ -0.67
CSMD1-208ENST00000520561 SNRKQ9NRH2 765 aa10.86□□□□□ -0.67
CSMD1-208ENST00000520561 DIAPH3Q9NSV4 1193 aa10.86□□□□□ -0.67
CSMD1-208ENST00000520561 POLLQ9UGP5 575 aa10.86□□□□□ -0.67
CSMD1-208ENST00000520561 DENND2AQ9ULE3 1009 aa10.86□□□□□ -0.67
CSMD1-208ENST00000520561 PDS5AQ29RF7 1337 aaKnown RBP10.85□□□□□ -0.67
CSMD1-208ENST00000520561 IRS2Q9Y4H2 1338 aa10.85□□□□□ -0.67
CSMD1-208ENST00000520561 SNED1Q8TER0 1413 aa10.85□□□□□ -0.67
CSMD1-208ENST00000520561 WTIPA6NIX2 430 aaPredicted RBP10.85□□□□□ -0.67
CSMD1-208ENST00000520561 G3V3G9 751 aa10.85□□□□□ -0.67
CSMD1-208ENST00000520561 ZAP70P43403 619 aa10.85□□□□□ -0.67
CSMD1-208ENST00000520561 RASGRF1Q13972 1273 aa10.85□□□□□ -0.67
CSMD1-208ENST00000520561 SCARF1Q14162 830 aa10.85□□□□□ -0.67
CSMD1-208ENST00000520561 DCAF8Q5TAQ9 597 aa10.85□□□□□ -0.67
CSMD1-208ENST00000520561 TBC1D9Q6ZT07 1266 aa10.85□□□□□ -0.67
CSMD1-208ENST00000520561 FBXO33Q7Z6M2 555 aa10.85□□□□□ -0.67
CSMD1-208ENST00000520561 KBTBD3Q8NAB2 608 aa10.85□□□□□ -0.67
CSMD1-208ENST00000520561 SPATA5Q8NB90 893 aa10.85□□□□□ -0.67
CSMD1-208ENST00000520561 FAM84BQ96KN1 310 aaPredicted RBP10.85□□□□□ -0.67
CSMD1-208ENST00000520561 GPR101Q96P66 508 aaPredicted RBP10.85□□□□□ -0.67
CSMD1-208ENST00000520561 ZC3H12CQ9C0D7 883 aaKnown RBP10.85□□□□□ -0.67
CSMD1-208ENST00000520561 HMG20BQ9P0W2 317 aa10.85□□□□□ -0.67
CSMD1-208ENST00000520561 NDUFB9Q9Y6M9 179 aa10.85□□□□□ -0.67
CSMD1-208ENST00000520561 COL1A1P02452 1464 aaPredicted RBP10.85□□□□□ -0.67
CSMD1-208ENST00000520561 RIMBP2O15034 1052 aa10.84□□□□□ -0.67
CSMD1-208ENST00000520561 ZBTB22O15209 634 aa10.84□□□□□ -0.67
CSMD1-208ENST00000520561 WASHC4Q2M389 1173 aa10.84□□□□□ -0.67
CSMD1-208ENST00000520561 TXNRD3Q86VQ6 643 aa10.84□□□□□ -0.67
CSMD1-208ENST00000520561 NLGN2Q8NFZ4 835 aa10.84□□□□□ -0.67
CSMD1-208ENST00000520561 RUFY2Q8WXA3 655 aa10.84□□□□□ -0.67
CSMD1-208ENST00000520561 EDC3Q96F86 508 aaKnown RBP10.84□□□□□ -0.67
CSMD1-208ENST00000520561 RTFDC1Q9BY42 306 aaPredicted RBP10.84□□□□□ -0.67
CSMD1-208ENST00000520561 BACH2Q9BYV9 841 aa10.84□□□□□ -0.67
CSMD1-208ENST00000520561 FHDC1Q9C0D6 1143 aaPredicted RBP10.84□□□□□ -0.67
CSMD1-208ENST00000520561 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.84□□□□□ -0.672e-6■■■□□ 15.2
CSMD1-208ENST00000520561 COA1Q9GZY4 146 aa10.84□□□□□ -0.67
CSMD1-208ENST00000520561 UPF2Q9HAU5 1272 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms