RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 CDCA7Q9BWT1 371 aaPredicted RBP30.5■■■□□ 2.47
COL13A1-213ENST00000520267 A0A0G2JS52 829 aa30.5■■■□□ 2.47
COL13A1-213ENST00000520267 EXOSC10Q01780 885 aaKnown RBP30.5■■■□□ 2.47
COL13A1-213ENST00000520267 CCDC183Q5T5S1 534 aa30.5■■■□□ 2.47
COL13A1-213ENST00000520267 TTLL5Q6EMB2 1281 aa30.5■■■□□ 2.47
COL13A1-213ENST00000520267 ACSBG1Q96GR2 724 aa30.5■■■□□ 2.47
COL13A1-213ENST00000520267 SLIT2O94813 1529 aa30.5■■■□□ 2.47
COL13A1-213ENST00000520267 MYH7P12883 1935 aa30.5■■■□□ 2.47
COL13A1-213ENST00000520267 AKAP11Q9UKA4 1901 aa30.5■■■□□ 2.47
COL13A1-213ENST00000520267 ESPNB1AK53 854 aa30.49■■■□□ 2.47
COL13A1-213ENST00000520267 FGD1P98174 961 aa30.49■■■□□ 2.47
COL13A1-213ENST00000520267 WASHC4Q2M389 1173 aa30.49■■■□□ 2.47
COL13A1-213ENST00000520267 LRRFIP1Q32MZ4 808 aaKnown RBP30.49■■■□□ 2.47
COL13A1-213ENST00000520267 FAM173BQ6P4H8 233 aa30.49■■■□□ 2.47
COL13A1-213ENST00000520267 VGLL2Q8N8G2 317 aa30.49■■■□□ 2.47
COL13A1-213ENST00000520267 ZFYP08048 801 aaPredicted RBP30.49■■■□□ 2.47
COL13A1-213ENST00000520267 NWD2Q9ULI1 1742 aa30.48■■■□□ 2.47
COL13A1-213ENST00000520267 EIF5P55010 431 aaKnown RBP30.48■■■□□ 2.47
COL13A1-213ENST00000520267 SCRN1Q12765 414 aa30.48■■■□□ 2.47
COL13A1-213ENST00000520267 INTS5Q6P9B9 1019 aaKnown RBP30.48■■■□□ 2.47
COL13A1-213ENST00000520267 RNF214Q8ND24 703 aa30.48■■■□□ 2.47
COL13A1-213ENST00000520267 PHLPP1O60346 1717 aa30.48■■■□□ 2.47
COL13A1-213ENST00000520267 ABCC12Q96J65 1359 aa30.48■■■□□ 2.47
COL13A1-213ENST00000520267 FOXP2O15409 715 aa30.48■■■□□ 2.47
COL13A1-213ENST00000520267 THRAP3Q9Y2W1 955 aaKnown RBP30.48■■■□□ 2.47
COL13A1-213ENST00000520267 MCAMP43121 646 aa30.47■■■□□ 2.47
COL13A1-213ENST00000520267 APOBRQ0VD83 1088 aa30.46■■■□□ 2.47
COL13A1-213ENST00000520267 MARCH10Q8NA82 808 aaPredicted RBP30.46■■■□□ 2.47
COL13A1-213ENST00000520267 PFKFB2O60825 505 aa30.45■■■□□ 2.47
COL13A1-213ENST00000520267 APPBP2Q92624 585 aa30.45■■■□□ 2.47
COL13A1-213ENST00000520267 AGXT2Q9BYV1 514 aa30.45■■■□□ 2.47
COL13A1-213ENST00000520267 CLCN1P35523 988 aa30.45■■■□□ 2.46
COL13A1-213ENST00000520267 KRT85P78386 507 aa30.45■■■□□ 2.46
COL13A1-213ENST00000520267 PDLIM2Q96JY6 352 aa30.45■■■□□ 2.46
COL13A1-213ENST00000520267 PUS7LQ9H0K6 701 aaKnown RBP30.45■■■□□ 2.46
COL13A1-213ENST00000520267 CCDC87Q9NVE4 849 aa30.45■■■□□ 2.46
COL13A1-213ENST00000520267 ATP6V1AP38606 617 aa30.44■■■□□ 2.46
COL13A1-213ENST00000520267 TTC6Q86TZ1 520 aa30.44■■■□□ 2.46
COL13A1-213ENST00000520267 PDE8BO95263 885 aa30.44■■■□□ 2.46
COL13A1-213ENST00000520267 CRKLP46109 303 aaKnown RBP30.44■■■□□ 2.46
COL13A1-213ENST00000520267 SUSD4Q5VX71 490 aa30.44■■■□□ 2.46
COL13A1-213ENST00000520267 CHST3Q7LGC8 479 aa30.43■■■□□ 2.46
COL13A1-213ENST00000520267 DDX11Q96FC9 970 aa30.43■■■□□ 2.46
COL13A1-213ENST00000520267 LTBP4Q8N2S1 1624 aa30.43■■■□□ 2.46
COL13A1-213ENST00000520267 SMARCC2Q8TAQ2 1214 aa30.43■■■□□ 2.46
COL13A1-213ENST00000520267 ZNF512BQ96KM6 892 aaPredicted RBP30.42■■■□□ 2.46
COL13A1-213ENST00000520267 MYO5AQ9Y4I1 1855 aaKnown RBP30.42■■■□□ 2.46
COL13A1-213ENST00000520267 LRP5O75197 1615 aa30.41■■■□□ 2.46
COL13A1-213ENST00000520267 LOC102724428A0A0B4J2F2 783 aa30.41■■■□□ 2.46
COL13A1-213ENST00000520267 NUTM2BA6NNL0 878 aaPredicted RBP30.41■■■□□ 2.46
COL13A1-213ENST00000520267 NUTM2EB1AL46 878 aaPredicted RBP30.41■■■□□ 2.46
COL13A1-213ENST00000520267 LETM1O95202 739 aaPredicted RBP30.41■■■□□ 2.46
COL13A1-213ENST00000520267 HCLS1P14317 486 aaPredicted RBP30.41■■■□□ 2.46
COL13A1-213ENST00000520267 SIK1P57059 783 aa30.41■■■□□ 2.46
COL13A1-213ENST00000520267 NUTM2AQ8IVF1 878 aaPredicted RBP30.41■■■□□ 2.46
COL13A1-213ENST00000520267 LLPHQ9BRT6 129 aaKnown RBP30.41■■■□□ 2.46
COL13A1-213ENST00000520267 CTNNA3Q9UI47 895 aa30.41■■■□□ 2.46
COL13A1-213ENST00000520267 FAM177BA6PVY3 158 aa30.4■■■□□ 2.46
COL13A1-213ENST00000520267 FGAP02671 866 aa30.4■■■□□ 2.46
COL13A1-213ENST00000520267 HAND2P61296 217 aa30.4■■■□□ 2.46
COL13A1-213ENST00000520267 ITPK1Q13572 414 aa30.4■■■□□ 2.46
COL13A1-213ENST00000520267 NSUN7Q8NE18 718 aaKnown RBP30.4■■■□□ 2.46
COL13A1-213ENST00000520267 SPATA31A5Q5VU36 1347 aa30.4■■■□□ 2.46
COL13A1-213ENST00000520267 SPATA31A7Q8IWB4 1347 aa30.4■■■□□ 2.46
COL13A1-213ENST00000520267 MYH14Q7Z406 1995 aaKnown RBP30.4■■■□□ 2.46
COL13A1-213ENST00000520267 CTDNEP1O95476 244 aa30.4■■■□□ 2.46
COL13A1-213ENST00000520267 HELBQ8NG08 1087 aaPredicted RBP30.39■■■□□ 2.46
COL13A1-213ENST00000520267 TFIP11Q9UBB9 837 aaKnown RBP30.39■■■□□ 2.46
COL13A1-213ENST00000520267 CCT2P78371 535 aaKnown RBP30.39■■■□□ 2.46
COL13A1-213ENST00000520267 CCDC102BQ68D86 513 aa30.39■■■□□ 2.46
COL13A1-213ENST00000520267 RREB1Q92766 1687 aa30.39■■■□□ 2.45
COL13A1-213ENST00000520267 ELP1O95163 1332 aa30.38■■■□□ 2.45
COL13A1-213ENST00000520267 GPAA1O43292 621 aa30.38■■■□□ 2.45
COL13A1-213ENST00000520267 PHKA1P46020 1223 aa30.38■■■□□ 2.45
COL13A1-213ENST00000520267 IMMTQ16891 758 aaKnown RBP30.38■■■□□ 2.45
COL13A1-213ENST00000520267 FAM184AQ8NB25 1140 aa30.38■■■□□ 2.45
COL13A1-213ENST00000520267 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.38■■■□□ 2.45
COL13A1-213ENST00000520267 PIH1D3Q9NQM4 214 aaKnown RBP30.38■■■□□ 2.45
COL13A1-213ENST00000520267 CAMTA2O94983 1202 aa30.38■■■□□ 2.45
COL13A1-213ENST00000520267 ADD2P35612 726 aa30.38■■■□□ 2.45
COL13A1-213ENST00000520267 RESTQ13127 1097 aa30.38■■■□□ 2.45
COL13A1-213ENST00000520267 AK7Q96M32 723 aa30.38■■■□□ 2.45
COL13A1-213ENST00000520267 FGFR2P21802 821 aa30.36■■■□□ 2.45
COL13A1-213ENST00000520267 PDIA3P30101 505 aaKnown RBP30.36■■■□□ 2.45
COL13A1-213ENST00000520267 MROH5Q6ZUA9 1318 aa30.36■■■□□ 2.45
COL13A1-213ENST00000520267 H3BQV1 296 aa30.36■■■□□ 2.45
COL13A1-213ENST00000520267 IFFO2Q5TF58 517 aa30.36■■■□□ 2.45
COL13A1-213ENST00000520267 UTP14AQ9BVJ6 771 aaKnown RBP30.36■■■□□ 2.45
COL13A1-213ENST00000520267 NCOA5Q9HCD5 579 aaKnown RBP30.36■■■□□ 2.45
COL13A1-213ENST00000520267 NAP1L2Q9ULW6 460 aaPredicted RBP30.36■■■□□ 2.45
COL13A1-213ENST00000520267 ARAP2Q8WZ64 1704 aa30.36■■■□□ 2.45
COL13A1-213ENST00000520267 PTPDC1A2A3K4 754 aa30.35■■■□□ 2.45
COL13A1-213ENST00000520267 ARID4AP29374 1257 aaPredicted RBP30.35■■■□□ 2.45
COL13A1-213ENST00000520267 PUM3Q15397 648 aaKnown RBP30.35■■■□□ 2.45
COL13A1-213ENST00000520267 SLC9C2Q5TAH2 1124 aa30.35■■■□□ 2.45
COL13A1-213ENST00000520267 ZNF274Q96GC6 653 aaPredicted RBP30.35■■■□□ 2.45
COL13A1-213ENST00000520267 SCAND2PQ9GZW5 306 aaPredicted RBP30.35■■■□□ 2.45
COL13A1-213ENST00000520267 GPHNQ9NQX3 736 aaPredicted RBP30.35■■■□□ 2.45
COL13A1-213ENST00000520267 TTF1Q15361 905 aaPredicted RBP30.35■■■□□ 2.45
COL13A1-213ENST00000520267 ZSCAN25Q6NSZ9 544 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms