RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 PELP1Q8IZL8 1130 aaKnown RBP21.87■■□□□ 1.09
SDC2-205ENST00000520233 EYA3Q99504 573 aa21.87■■□□□ 1.09
SDC2-205ENST00000520233 LNPKQ9C0E8 428 aa21.87■■□□□ 1.09
SDC2-205ENST00000520233 CCDC8Q9H0W5 538 aaPredicted RBP21.87■■□□□ 1.09
SDC2-205ENST00000520233 LTBP3Q9NS15 1303 aa21.86■■□□□ 1.09
SDC2-205ENST00000520233 XAGE2Q96GT9 111 aa21.86■■□□□ 1.09
SDC2-205ENST00000520233 BCL11AQ9H165 835 aa21.86■■□□□ 1.09
SDC2-205ENST00000520233 MED23Q9ULK4 1368 aa21.86■■□□□ 1.09
SDC2-205ENST00000520233 WASHC4Q2M389 1173 aa21.85■■□□□ 1.09
SDC2-205ENST00000520233 C16orf71Q8IYS4 520 aaPredicted RBP21.85■■□□□ 1.09
SDC2-205ENST00000520233 VPS33BQ9H267 617 aa21.85■■□□□ 1.09
SDC2-205ENST00000520233 TAOK3Q9H2K8 898 aa21.85■■□□□ 1.09
SDC2-205ENST00000520233 DBNLQ9UJU6 430 aaKnown RBP21.85■■□□□ 1.09
SDC2-205ENST00000520233 NFKBIEO00221 500 aa21.84■■□□□ 1.09
SDC2-205ENST00000520233 KLRK1P26718 216 aa21.84■■□□□ 1.09
SDC2-205ENST00000520233 ADORA1P30542 326 aa21.84■■□□□ 1.09
SDC2-205ENST00000520233 GPR101Q96P66 508 aaPredicted RBP21.84■■□□□ 1.09
SDC2-205ENST00000520233 DBNDD2Q9BQY9 259 aa21.84■■□□□ 1.09
SDC2-205ENST00000520233 ZC3H12CQ9C0D7 883 aaKnown RBP21.84■■□□□ 1.09
SDC2-205ENST00000520233 TLR7Q9NYK1 1049 aaKnown RBP21.84■■□□□ 1.09
SDC2-205ENST00000520233 FER1L6Q2WGJ9 1857 aa21.83■■□□□ 1.09
SDC2-205ENST00000520233 ARAP2Q8WZ64 1704 aa21.83■■□□□ 1.09
SDC2-205ENST00000520233 GPR162Q16538 588 aa21.83■■□□□ 1.09
SDC2-205ENST00000520233 CAVIN4Q5BKX8 364 aa21.83■■□□□ 1.09
SDC2-205ENST00000520233 ARHGAP27Q6ZUM4 889 aa21.83■■□□□ 1.09
SDC2-205ENST00000520233 TXNRD3Q86VQ6 643 aa21.83■■□□□ 1.09
SDC2-205ENST00000520233 KIAA2012Q0VF49 1180 aa21.82■■□□□ 1.08
SDC2-205ENST00000520233 GORABQ5T7V8 394 aa21.82■■□□□ 1.08
SDC2-205ENST00000520233 FBXO33Q7Z6M2 555 aa21.82■■□□□ 1.08
SDC2-205ENST00000520233 FAM84BQ96KN1 310 aaPredicted RBP21.82■■□□□ 1.08
SDC2-205ENST00000520233 SALL3Q9BXA9 1300 aa21.81■■□□□ 1.08
SDC2-205ENST00000520233 RIMBP2O15034 1052 aa21.81■■□□□ 1.08
SDC2-205ENST00000520233 PDE4AP27815 886 aa21.81■■□□□ 1.08
SDC2-205ENST00000520233 GYG1P46976 350 aa21.81■■□□□ 1.08
SDC2-205ENST00000520233 CCDC158Q5M9N0 1113 aa21.81■■□□□ 1.08
SDC2-205ENST00000520233 ZNF804AQ7Z570 1209 aa21.81■■□□□ 1.08
SDC2-205ENST00000520233 OTUD7AQ8TE49 926 aaPredicted RBP21.81■■□□□ 1.08
SDC2-205ENST00000520233 PPIP5K2O43314 1243 aa21.8■■□□□ 1.08
SDC2-205ENST00000520233 GRIN3BO60391 1043 aa21.8■■□□□ 1.08
SDC2-205ENST00000520233 HIBADHP31937 336 aaKnown RBP21.8■■□□□ 1.08
SDC2-205ENST00000520233 BCAMP50895 628 aa21.8■■□□□ 1.08
SDC2-205ENST00000520233 AOC3Q16853 763 aa21.8■■□□□ 1.08
SDC2-205ENST00000520233 CCDC102BQ68D86 513 aa21.8■■□□□ 1.08
SDC2-205ENST00000520233 GPATCH3Q96I76 525 aa21.8■■□□□ 1.08
SDC2-205ENST00000520233 COA1Q9GZY4 146 aa21.8■■□□□ 1.08
SDC2-205ENST00000520233 ZNF277Q9NRM2 450 aaPredicted RBP21.8■■□□□ 1.08
SDC2-205ENST00000520233 MX1P20591 662 aa21.79■■□□□ 1.08
SDC2-205ENST00000520233 IARSP41252 1262 aaKnown RBP21.79■■□□□ 1.08
SDC2-205ENST00000520233 PHKA1P46020 1223 aa21.79■■□□□ 1.08
SDC2-205ENST00000520233 RASSF7Q02833 373 aa21.79■■□□□ 1.08
SDC2-205ENST00000520233 VPS37DQ86XT2 251 aa21.79■■□□□ 1.08
SDC2-205ENST00000520233 PLEKHM2Q8IWE5 1019 aa21.79■■□□□ 1.08
SDC2-205ENST00000520233 ZNF512BQ96KM6 892 aaPredicted RBP21.79■■□□□ 1.08
SDC2-205ENST00000520233 ECHDC1Q9NTX5 307 aa21.79■■□□□ 1.08
SDC2-205ENST00000520233 STAP2Q9UGK3 403 aa21.79■■□□□ 1.08
SDC2-205ENST00000520233 TTC41PQ6P2S7 1318 aa21.79■■□□□ 1.08
SDC2-205ENST00000520233 ZBTB22O15209 634 aa21.78■■□□□ 1.08
SDC2-205ENST00000520233 TTC39AQ5SRH9 613 aa21.78■■□□□ 1.08
SDC2-205ENST00000520233 GNL3LQ9NVN8 582 aaKnown RBP21.78■■□□□ 1.08
SDC2-205ENST00000520233 UQCRFS1P1P0C7P4 283 aa21.77■■□□□ 1.08
SDC2-205ENST00000520233 ARID4AP29374 1257 aaPredicted RBP21.77■■□□□ 1.08
SDC2-205ENST00000520233 PDE1AP54750 535 aa21.77■■□□□ 1.08
SDC2-205ENST00000520233 LARGE2Q8N3Y3 721 aa21.77■■□□□ 1.08
SDC2-205ENST00000520233 OSBPL3Q9H4L5 887 aa21.77■■□□□ 1.08
SDC2-205ENST00000520233 CD209Q9NNX6 404 aa21.77■■□□□ 1.08
SDC2-205ENST00000520233 G3V3G9 751 aa21.76■■□□□ 1.07
SDC2-205ENST00000520233 IL1R1P14778 569 aa21.76■■□□□ 1.07
SDC2-205ENST00000520233 ATP5JP18859 108 aa21.76■■□□□ 1.07
SDC2-205ENST00000520233 DCAF8Q5TAQ9 597 aa21.76■■□□□ 1.07
SDC2-205ENST00000520233 TDRD7Q8NHU6 1098 aaKnown RBP21.76■■□□□ 1.07
SDC2-205ENST00000520233 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.76■■□□□ 1.07
SDC2-205ENST00000520233 AOX1Q06278 1338 aa21.76■■□□□ 1.07
SDC2-205ENST00000520233 SEMA3EO15041 775 aa21.75■■□□□ 1.07
SDC2-205ENST00000520233 ERC2O15083 957 aa21.75■■□□□ 1.07
SDC2-205ENST00000520233 LMNB1P20700 586 aa21.75■■□□□ 1.07
SDC2-205ENST00000520233 PRELPP51888 382 aa21.75■■□□□ 1.07
SDC2-205ENST00000520233 DOK7Q18PE1 504 aa21.75■■□□□ 1.07
SDC2-205ENST00000520233 PODNQ7Z5L7 613 aa21.75■■□□□ 1.07
SDC2-205ENST00000520233 SRCAPQ6ZRS2 3230 aa21.74■■□□□ 1.07
SDC2-205ENST00000520233 ECE2O60344 883 aa21.74■■□□□ 1.07
SDC2-205ENST00000520233 NIM1KQ8IY84 436 aa21.74■■□□□ 1.07
SDC2-205ENST00000520233 PI4K2BQ8TCG2 481 aa21.74■■□□□ 1.07
SDC2-205ENST00000520233 DBNDD1Q9H9R9 158 aa21.74■■□□□ 1.07
SDC2-205ENST00000520233 DCAF8L1A6NGE4 600 aa21.73■■□□□ 1.07
SDC2-205ENST00000520233 GLRX3O76003 335 aaKnown RBP21.73■■□□□ 1.07
SDC2-205ENST00000520233 TSHZ3Q63HK5 1081 aa21.73■■□□□ 1.07
SDC2-205ENST00000520233 SKAP1Q86WV1 359 aa21.73■■□□□ 1.07
SDC2-205ENST00000520233 JDP2Q8WYK2 163 aa21.73■■□□□ 1.07
SDC2-205ENST00000520233 DENND2AQ9ULE3 1009 aa21.73■■□□□ 1.07
SDC2-205ENST00000520233 FRAT2O75474 233 aaPredicted RBP21.72■■□□□ 1.07
SDC2-205ENST00000520233 MCAMP43121 646 aa21.72■■□□□ 1.07
SDC2-205ENST00000520233 RASGRF1Q13972 1273 aa21.72■■□□□ 1.07
SDC2-205ENST00000520233 IQSEC3Q9UPP2 1182 aaPredicted RBP21.72■■□□□ 1.07
SDC2-205ENST00000520233 COL4A5P29400 1685 aa21.72■■□□□ 1.07
SDC2-205ENST00000520233 RGS3P49796 1198 aa21.71■■□□□ 1.07
SDC2-205ENST00000520233 SCARF1Q14162 830 aa21.71■■□□□ 1.07
SDC2-205ENST00000520233 SPATA5Q8NB90 893 aa21.71■■□□□ 1.07
SDC2-205ENST00000520233 BOLA2Q9H3K6 86 aa21.71■■□□□ 1.07
SDC2-205ENST00000520233 HMG20BQ9P0W2 317 aa21.71■■□□□ 1.07
SDC2-205ENST00000520233 ZNRF3Q9ULT6 936 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms