RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 MAP3K2Q9Y2U5 619 aa11.22□□□□□ -0.61
PABPC1-213ENST00000519848 RASSF10A6NK89 507 aa11.21□□□□□ -0.61
PABPC1-213ENST00000519848 TMEM88BA6NKF7 163 aa11.21□□□□□ -0.61
PABPC1-213ENST00000519848 PSMD14O00487 310 aa11.21□□□□□ -0.61
PABPC1-213ENST00000519848 BBOX1O75936 387 aa11.21□□□□□ -0.61
PABPC1-213ENST00000519848 KLRK1P26718 216 aa11.21□□□□□ -0.61
PABPC1-213ENST00000519848 CASP7P55210 303 aa11.21□□□□□ -0.61
PABPC1-213ENST00000519848 GNAI1P63096 354 aa11.21□□□□□ -0.61
PABPC1-213ENST00000519848 DDX46Q7L014 1031 aaKnown RBP11.21□□□□□ -0.61
PABPC1-213ENST00000519848 TBC1D16Q8TBP0 767 aa11.21□□□□□ -0.61
PABPC1-213ENST00000519848 MS4A4AQ96JQ5 239 aa11.21□□□□□ -0.61
PABPC1-213ENST00000519848 METTL22Q9BUU2 404 aaPredicted RBP11.21□□□□□ -0.61
PABPC1-213ENST00000519848 HCSTQ9UBK5 93 aa11.21□□□□□ -0.61
PABPC1-213ENST00000519848 PI4KAP2A4QPH2 592 aa11.2□□□□□ -0.62
PABPC1-213ENST00000519848 PCCAP05165 728 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-213ENST00000519848 SAMD7Q7Z3H4 446 aa11.2□□□□□ -0.62
PABPC1-213ENST00000519848 RIC3Q7Z5B4 369 aa11.2□□□□□ -0.62
PABPC1-213ENST00000519848 PI4KAP1Q8N8J0 262 aa11.2□□□□□ -0.62
PABPC1-213ENST00000519848 ZBTB38Q8NAP3 1195 aaPredicted RBP11.2□□□□□ -0.62
PABPC1-213ENST00000519848 ZIC5Q96T25 663 aa11.2□□□□□ -0.62
PABPC1-213ENST00000519848 ECE2O60344 883 aa11.19□□□□□ -0.62
PABPC1-213ENST00000519848 CCDC27Q2M243 656 aa11.19□□□□□ -0.62
PABPC1-213ENST00000519848 CIAPIN1Q6FI81 312 aa11.19□□□□□ -0.62
PABPC1-213ENST00000519848 CYP4F22Q6NT55 531 aa11.19□□□□□ -0.62
PABPC1-213ENST00000519848 PNMA8AQ86V59 439 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-213ENST00000519848 GREM2Q9H772 168 aa11.19□□□□□ -0.62
PABPC1-213ENST00000519848 CIZ1Q9ULV3 898 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-213ENST00000519848 NSFL1CQ9UNZ2 370 aaKnown RBP11.19□□□□□ -0.62
PABPC1-213ENST00000519848 SALL2Q9Y467 1007 aaPredicted RBP11.19□□□□□ -0.62
PABPC1-213ENST00000519848 CDHR2Q9BYE9 1310 aa11.18□□□□□ -0.62
PABPC1-213ENST00000519848 IRS2Q9Y4H2 1338 aa11.18□□□□□ -0.62
PABPC1-213ENST00000519848 NEURL1BA8MQ27 555 aa11.18□□□□□ -0.62
PABPC1-213ENST00000519848 ADM5C9JUS6 153 aa11.18□□□□□ -0.62
PABPC1-213ENST00000519848 AOC2O75106 756 aa11.18□□□□□ -0.62
PABPC1-213ENST00000519848 TXNRD3Q86VQ6 643 aa11.18□□□□□ -0.62
PABPC1-213ENST00000519848 MXD3Q9BW11 206 aa11.18□□□□□ -0.62
PABPC1-213ENST00000519848 ADARB2Q9NS39 739 aaKnown RBP11.18□□□□□ -0.62
PABPC1-213ENST00000519848 WBP1LQ9NX94 342 aa11.18□□□□□ -0.62
PABPC1-213ENST00000519848 PGAP2Q9UHJ9 254 aa11.18□□□□□ -0.62
PABPC1-213ENST00000519848 SCAF8Q9UPN6 1271 aaKnown RBP11.18□□□□□ -0.62
PABPC1-213ENST00000519848 ZNF609O15014 1411 aa11.18□□□□□ -0.62
PABPC1-213ENST00000519848 SNAP23O00161 211 aa11.17□□□□□ -0.62
PABPC1-213ENST00000519848 HSPA8P11142 646 aaKnown RBP11.17□□□□□ -0.62
PABPC1-213ENST00000519848 CTSWP56202 376 aa11.17□□□□□ -0.62
PABPC1-213ENST00000519848 RPS8P62241 208 aaKnown RBP11.17□□□□□ -0.62
PABPC1-213ENST00000519848 TWISTNBQ3B726 338 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-213ENST00000519848 TBC1D10BQ4KMP7 808 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-213ENST00000519848 USP50Q70EL3 339 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-213ENST00000519848 CCDC191Q8NCU4 936 aa11.17□□□□□ -0.62
PABPC1-213ENST00000519848 TTLL11Q8NHH1 800 aa11.17□□□□□ -0.62
PABPC1-213ENST00000519848 MRS2Q9HD23 443 aa11.17□□□□□ -0.62
PABPC1-213ENST00000519848 CWC25Q9NXE8 425 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-213ENST00000519848 PODXL2Q9NZ53 605 aa11.17□□□□□ -0.62
PABPC1-213ENST00000519848 TSKSQ9UJT2 592 aa11.17□□□□□ -0.62
PABPC1-213ENST00000519848 ZNF521Q96K83 1311 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 WDR33Q9C0J8 1336 aaKnown RBP11.16□□□□□ -0.62
PABPC1-213ENST00000519848 F6X3S4 739 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 PDE8AO60658 829 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 VAMP4O75379 141 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 UFL1O94874 794 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 LMOD1P29536 600 aaPredicted RBP11.16□□□□□ -0.62
PABPC1-213ENST00000519848 PBX2P40425 430 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 WASHC4Q2M389 1173 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 FAM161AQ3B820 660 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 GRIPAP1Q4V328 841 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 EPHA10Q5JZY3 1008 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 KSR2Q6VAB6 950 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 UBE3BQ7Z3V4 1068 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 TNS4Q8IZW8 715 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 SUPT20HQ8NEM7 779 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 VPS33BQ9H267 617 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 CNOT7Q9UIV1 285 aaKnown RBP11.16□□□□□ -0.62
PABPC1-213ENST00000519848 ABT1Q9ULW3 272 aaKnown RBP11.16□□□□□ -0.62
PABPC1-213ENST00000519848 TLL2Q9Y6L7 1015 aa11.16□□□□□ -0.62
PABPC1-213ENST00000519848 AOX1Q06278 1338 aa11.15□□□□□ -0.62
PABPC1-213ENST00000519848 C6orf229H3BNL8 230 aa11.15□□□□□ -0.62
PABPC1-213ENST00000519848 H7C1W4 665 aa11.15□□□□□ -0.62
PABPC1-213ENST00000519848 LBX1P52954 281 aa11.15□□□□□ -0.62
PABPC1-213ENST00000519848 EXOSC9Q06265 439 aaKnown RBP11.15□□□□□ -0.62
PABPC1-213ENST00000519848 FLIIQ13045 1269 aa11.15□□□□□ -0.62
PABPC1-213ENST00000519848 DEFB115Q30KQ5 88 aa11.15□□□□□ -0.62
PABPC1-213ENST00000519848 CCDC30Q5VVM6 783 aa11.15□□□□□ -0.62
PABPC1-213ENST00000519848 SAPCD2Q86UD0 394 aa11.15□□□□□ -0.62
PABPC1-213ENST00000519848 CAPNS2Q96L46 248 aa11.15□□□□□ -0.62
PABPC1-213ENST00000519848 GMLQ99445 158 aa11.15□□□□□ -0.62
PABPC1-213ENST00000519848 CACNA1FO60840 1977 aa11.15□□□□□ -0.62
PABPC1-213ENST00000519848 IL16Q14005 1332 aa11.14□□□□□ -0.63
PABPC1-213ENST00000519848 CELF2O95319 508 aaKnown RBP11.14□□□□□ -0.63
PABPC1-213ENST00000519848 FAM155AB1AL88 458 aaPredicted RBP11.13□□□□□ -0.63
PABPC1-213ENST00000519848 VIL1P09327 827 aaKnown RBP11.13□□□□□ -0.63
PABPC1-213ENST00000519848 GRM1Q13255 1194 aa11.13□□□□□ -0.63
PABPC1-213ENST00000519848 GCKRQ14397 625 aa11.13□□□□□ -0.63
PABPC1-213ENST00000519848 TMC4Q7Z404 712 aa11.13□□□□□ -0.63
PABPC1-213ENST00000519848 USP48Q86UV5 1035 aa11.13□□□□□ -0.63
PABPC1-213ENST00000519848 ZNF408Q9H9D4 720 aa11.13□□□□□ -0.63
PABPC1-213ENST00000519848 GGA3Q9NZ52 723 aa11.13□□□□□ -0.63
PABPC1-213ENST00000519848 MINPP1Q9UNW1 487 aa11.13□□□□□ -0.63
PABPC1-213ENST00000519848 PCDHAC2Q9Y5I4 1007 aa11.13□□□□□ -0.63
PABPC1-213ENST00000519848 ARAP2Q8WZ64 1704 aa11.12□□□□□ -0.63
PABPC1-213ENST00000519848 SSC5DA1L4H1 1573 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms