RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 NUTM2GQ5VZR2 741 aa13.2□□□□□ -0.3
SPIDR-211ENST00000519401 FOXD4L3Q6VB84 417 aaPredicted RBP13.2□□□□□ -0.3
SPIDR-211ENST00000519401 RSRC2Q7L4I2 434 aaKnown RBP13.2□□□□□ -0.3
SPIDR-211ENST00000519401 FAM71BQ8TC56 605 aa13.2□□□□□ -0.3
SPIDR-211ENST00000519401 CCDC34Q96HJ3 373 aa13.2□□□□□ -0.3
SPIDR-211ENST00000519401 NGLY1Q96IV0 654 aa13.2□□□□□ -0.3
SPIDR-211ENST00000519401 ATXN2Q99700 1313 aaKnown RBP13.2□□□□□ -0.3
SPIDR-211ENST00000519401 POTEB2H3BUK9 544 aa13.2□□□□□ -0.3
SPIDR-211ENST00000519401 U2AF1L5P0DN76 240 aaPredicted RBP13.2□□□□□ -0.3
SPIDR-211ENST00000519401 U2AF1Q01081 240 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPIDR-211ENST00000519401 IQCB1Q15051 598 aa13.2□□□□□ -0.3
SPIDR-211ENST00000519401 LONRF2Q1L5Z9 754 aa13.2□□□□□ -0.3
SPIDR-211ENST00000519401 VEZTQ9HBM0 779 aa13.2□□□□□ -0.3
SPIDR-211ENST00000519401 VPS18Q9P253 973 aa13.2□□□□□ -0.3
SPIDR-211ENST00000519401 MCM8Q9UJA3 840 aa13.2□□□□□ -0.3
SPIDR-211ENST00000519401 GPTP24298 496 aa13.19□□□□□ -0.3
SPIDR-211ENST00000519401 MRPL12P52815 198 aaKnown RBP13.19□□□□□ -0.3
SPIDR-211ENST00000519401 ICA1Q05084 483 aa13.19□□□□□ -0.3
SPIDR-211ENST00000519401 ZNF772Q68DY9 489 aaPredicted RBP13.19□□□□□ -0.3
SPIDR-211ENST00000519401 FOXR1Q6PIV2 292 aa13.19□□□□□ -0.3
SPIDR-211ENST00000519401 HDXQ7Z353 690 aa13.19□□□□□ -0.3
SPIDR-211ENST00000519401 CALR3Q96L12 384 aaKnown RBP13.19□□□□□ -0.3
SPIDR-211ENST00000519401 MPHOSPH8Q99549 860 aa13.19□□□□□ -0.3
SPIDR-211ENST00000519401 CPSF1Q10570 1443 aaKnown RBP13.19□□□□□ -0.3
SPIDR-211ENST00000519401 CD163L1Q9NR16 1453 aa13.19□□□□□ -0.3
SPIDR-211ENST00000519401 USP5P45974 858 aa13.19□□□□□ -0.3
SPIDR-211ENST00000519401 CCDC30Q5VVM6 783 aa13.19□□□□□ -0.3
SPIDR-211ENST00000519401 KCNV1Q6PIU1 500 aa13.19□□□□□ -0.3
SPIDR-211ENST00000519401 ESYT1Q9BSJ8 1104 aa13.19□□□□□ -0.3
SPIDR-211ENST00000519401 TRIM35Q9UPQ4 493 aa13.19□□□□□ -0.3
SPIDR-211ENST00000519401 A0A1W2PP64 1363 aa13.18□□□□□ -0.3
SPIDR-211ENST00000519401 CRYBG1Q9Y4K1 1723 aa13.18□□□□□ -0.3
SPIDR-211ENST00000519401 NEFHP12036 1026 aa13.18□□□□□ -0.3
SPIDR-211ENST00000519401 INHBEP58166 350 aa13.18□□□□□ -0.3
SPIDR-211ENST00000519401 ADCY2Q08462 1091 aa13.18□□□□□ -0.3
SPIDR-211ENST00000519401 FNBP4Q8N3X1 1017 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-211ENST00000519401 PRPF38AQ8NAV1 312 aaKnown RBP13.18□□□□□ -0.3
SPIDR-211ENST00000519401 KAT2BQ92831 832 aa13.18□□□□□ -0.3
SPIDR-211ENST00000519401 MARF1Q9Y4F3 1742 aaKnown RBP13.18□□□□□ -0.3
SPIDR-211ENST00000519401 SCP2P22307 547 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 TMPOP42166 694 aaKnown RBP13.17□□□□□ -0.3
SPIDR-211ENST00000519401 KRT85P78386 507 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 FCHSD1Q86WN1 690 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 RPAP2Q8IXW5 612 aaPredicted RBP13.17□□□□□ -0.3
SPIDR-211ENST00000519401 TEX13AQ9BXU3 409 aaPredicted RBP13.17□□□□□ -0.3
SPIDR-211ENST00000519401 ACBD3Q9H3P7 528 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 AKAP2Q9Y2D5 859 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 TUBBP07437 444 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 DNM1Q05193 864 aaKnown RBP13.17□□□□□ -0.3
SPIDR-211ENST00000519401 ARID5BQ14865 1188 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 ABTB2Q8N961 1025 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 TATDN2Q93075 761 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 PARD6BQ9BYG5 372 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 USP21Q9UK80 565 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 MTMR6Q9Y217 621 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 PARP3Q9Y6F1 533 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 TTC21AQ8NDW8 1320 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 BCL9LQ86UU0 1499 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 AKAP12Q02952 1782 aa13.17□□□□□ -0.3
SPIDR-211ENST00000519401 MPHOSPH10O00566 681 aaKnown RBP13.16□□□□□ -0.3
SPIDR-211ENST00000519401 CHUKO15111 745 aa13.16□□□□□ -0.3
SPIDR-211ENST00000519401 IPO7O95373 1038 aaKnown RBP13.16□□□□□ -0.3
SPIDR-211ENST00000519401 HMGB1P09429 215 aaKnown RBP13.16□□□□□ -0.3
SPIDR-211ENST00000519401 TXLNAP40222 546 aa13.16□□□□□ -0.3
SPIDR-211ENST00000519401 GRIK3Q13003 919 aa13.16□□□□□ -0.3
SPIDR-211ENST00000519401 PREPLQ4J6C6 727 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-211ENST00000519401 VPS53Q5VIR6 699 aa13.16□□□□□ -0.3
SPIDR-211ENST00000519401 NRKQ7Z2Y5 1582 aa13.16□□□□□ -0.3
SPIDR-211ENST00000519401 ANKRD44Q8N8A2 993 aa13.16□□□□□ -0.3
SPIDR-211ENST00000519401 CABS1Q96KC9 395 aa13.16□□□□□ -0.3
SPIDR-211ENST00000519401 CARD6Q9BX69 1037 aa13.16□□□□□ -0.3
SPIDR-211ENST00000519401 TRIM6Q9C030 488 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-211ENST00000519401 SCAND2PQ9GZW5 306 aaPredicted RBP13.16□□□□□ -0.3
SPIDR-211ENST00000519401 ETAA1Q9NY74 926 aa13.16□□□□□ -0.3
SPIDR-211ENST00000519401 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
SPIDR-211ENST00000519401 PHRF1Q9P1Y6 1649 aaKnown RBP13.16□□□□□ -0.3
SPIDR-211ENST00000519401 SLIT2O94813 1529 aa13.16□□□□□ -0.3
SPIDR-211ENST00000519401 ERLIN1O75477 346 aa13.16□□□□□ -0.3
SPIDR-211ENST00000519401 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
SPIDR-211ENST00000519401 GOLGA1Q92805 767 aa13.16□□□□□ -0.3
SPIDR-211ENST00000519401 SH3GL3Q99963 347 aa13.16□□□□□ -0.3
SPIDR-211ENST00000519401 FAM83GA6ND36 823 aa13.15□□□□□ -0.3
SPIDR-211ENST00000519401 GNAI1P63096 354 aa13.15□□□□□ -0.3
SPIDR-211ENST00000519401 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
SPIDR-211ENST00000519401 SCRN1Q12765 414 aa13.15□□□□□ -0.3
SPIDR-211ENST00000519401 ZC3H12AQ5D1E8 599 aaKnown RBP13.15□□□□□ -0.3
SPIDR-211ENST00000519401 TRIM65Q6PJ69 517 aa13.15□□□□□ -0.3
SPIDR-211ENST00000519401 API5Q9BZZ5 524 aaKnown RBP13.15□□□□□ -0.3
SPIDR-211ENST00000519401 DNAJC25Q9H1X3 360 aa13.15□□□□□ -0.3
SPIDR-211ENST00000519401 C1orf115Q9H7X2 142 aa13.15□□□□□ -0.3
SPIDR-211ENST00000519401 QTRT2Q9H974 415 aaKnown RBP13.15□□□□□ -0.3
SPIDR-211ENST00000519401 RAB21Q9UL25 225 aa13.15□□□□□ -0.3
SPIDR-211ENST00000519401 PIK3C2AO00443 1686 aa13.15□□□□□ -0.3
SPIDR-211ENST00000519401 GOLGA6L9A6NEM1 432 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 GNAI3P08754 354 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 NF2P35240 595 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 HSP90B2PQ58FF3 399 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 AP1ARQ63HQ0 302 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 HOMER1Q86YM7 354 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms