RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 TRMT44Q8IYL2 757 aaKnown RBP9.52□□□□□ -0.89
CLK4-202ENST00000519132 PGBD3Q8N328 593 aa9.52□□□□□ -0.89
CLK4-202ENST00000519132 PSMD1Q99460 953 aa9.52□□□□□ -0.89
CLK4-202ENST00000519132 KLF4O43474 513 aa9.52□□□□□ -0.89
CLK4-202ENST00000519132 NR3C2P08235 984 aa9.52□□□□□ -0.89
CLK4-202ENST00000519132 FMNL3Q8IVF7 1028 aa9.52□□□□□ -0.89
CLK4-202ENST00000519132 KDF1Q8NAX2 398 aaPredicted RBP9.52□□□□□ -0.89
CLK4-202ENST00000519132 ZNF280CQ8ND82 737 aa9.52□□□□□ -0.89
CLK4-202ENST00000519132 JDP2Q8WYK2 163 aa9.52□□□□□ -0.89
CLK4-202ENST00000519132 IER2Q9BTL4 223 aa9.52□□□□□ -0.89
CLK4-202ENST00000519132 ATP7AQ04656 1500 aa9.52□□□□□ -0.89
CLK4-202ENST00000519132 LATS2Q9NRM7 1088 aa9.51□□□□□ -0.89
CLK4-202ENST00000519132 THRAP3Q9Y2W1 955 aaKnown RBP9.51□□□□□ -0.89
CLK4-202ENST00000519132 KDM6BO15054 1643 aa9.51□□□□□ -0.89
CLK4-202ENST00000519132 KIDINS220Q9ULH0 1771 aa9.51□□□□□ -0.89
CLK4-202ENST00000519132 CPNE3O75131 537 aaKnown RBP9.51□□□□□ -0.89
CLK4-202ENST00000519132 MTFR1Q15390 333 aa9.51□□□□□ -0.89
CLK4-202ENST00000519132 FBF1Q8TES7 1133 aa9.51□□□□□ -0.89
CLK4-202ENST00000519132 TRIM55Q9BYV6 548 aa9.51□□□□□ -0.89
CLK4-202ENST00000519132 LEMD3Q9Y2U8 911 aa9.51□□□□□ -0.89
CLK4-202ENST00000519132 HECW2Q9P2P5 1572 aa9.51□□□□□ -0.89
CLK4-202ENST00000519132 DUOX2Q9NRD8 1548 aa9.51□□□□□ -0.89
CLK4-202ENST00000519132 NFE2L2Q16236 605 aa9.51□□□□□ -0.89
CLK4-202ENST00000519132 KANK3Q6NY19 840 aa9.51□□□□□ -0.89
CLK4-202ENST00000519132 EVI5LQ96CN4 794 aa9.51□□□□□ -0.89
CLK4-202ENST00000519132 CABP1Q9NZU7 370 aa9.51□□□□□ -0.89
CLK4-202ENST00000519132 TMEM63CQ9P1W3 806 aa9.51□□□□□ -0.89
CLK4-202ENST00000519132 NAP1L2Q9ULW6 460 aaPredicted RBP9.51□□□□□ -0.89
CLK4-202ENST00000519132 MLH3Q9UHC1 1453 aa9.5□□□□□ -0.89
CLK4-202ENST00000519132 JAMLQ86YT9 394 aa9.5□□□□□ -0.89
CLK4-202ENST00000519132 PMM1Q92871 262 aa9.5□□□□□ -0.89
CLK4-202ENST00000519132 HSH2DQ96JZ2 352 aa9.5□□□□□ -0.89
CLK4-202ENST00000519132 BCO2Q9BYV7 579 aa9.5□□□□□ -0.89
CLK4-202ENST00000519132 ZMYM4Q5VZL5 1548 aa9.5□□□□□ -0.89
CLK4-202ENST00000519132 DNAJC6O75061 913 aa9.5□□□□□ -0.89
CLK4-202ENST00000519132 CHMP4BP1P59074 171 aa9.5□□□□□ -0.89
CLK4-202ENST00000519132 FBXL19Q6PCT2 694 aa9.5□□□□□ -0.89
CLK4-202ENST00000519132 SPC25Q9HBM1 224 aa9.5□□□□□ -0.89
CLK4-202ENST00000519132 SCUBE2Q9NQ36 999 aa9.5□□□□□ -0.89
CLK4-202ENST00000519132 DENND4BO75064 1496 aaPredicted RBP9.5□□□□□ -0.89
CLK4-202ENST00000519132 FRMPD1Q5SYB0 1578 aa9.5□□□□□ -0.89
CLK4-202ENST00000519132 SERTM1A2A2V5 107 aa9.49□□□□□ -0.89
CLK4-202ENST00000519132 EIF2AK4Q9P2K8 1649 aaKnown RBP9.49□□□□□ -0.89
CLK4-202ENST00000519132 CCDC194A0A1B0GVG4 234 aa9.49□□□□□ -0.89
CLK4-202ENST00000519132 MAP3K10Q02779 954 aa9.49□□□□□ -0.89
CLK4-202ENST00000519132 RAB33AQ14088 237 aa9.49□□□□□ -0.89
CLK4-202ENST00000519132 PPP1R26Q5T8A7 1209 aaPredicted RBP9.49□□□□□ -0.89
CLK4-202ENST00000519132 TTF2Q9UNY4 1162 aaKnown RBP9.49□□□□□ -0.89
CLK4-202ENST00000519132 DHX57Q6P158 1386 aaKnown RBP9.49□□□□□ -0.89
CLK4-202ENST00000519132 KIF15Q9NS87 1388 aa9.49□□□□□ -0.89
CLK4-202ENST00000519132 ANKRD50Q9ULJ7 1429 aa9.49□□□□□ -0.89
CLK4-202ENST00000519132 ENPP3O14638 875 aa9.49□□□□□ -0.89
CLK4-202ENST00000519132 RRP7BPQ9NSQ0 103 aa9.49□□□□□ -0.89
CLK4-202ENST00000519132 BCORL1Q5H9F3 1711 aa9.48□□□□□ -0.89
CLK4-202ENST00000519132 ERBINQ96RT1 1412 aa9.48□□□□□ -0.89
CLK4-202ENST00000519132 UNC13BO14795 1591 aa9.48□□□□□ -0.89
CLK4-202ENST00000519132 GOLGA8CPA6NN73 597 aa9.48□□□□□ -0.89
CLK4-202ENST00000519132 HCLS1P14317 486 aaPredicted RBP9.48□□□□□ -0.89
CLK4-202ENST00000519132 C11orf91Q3C1V1 193 aa9.48□□□□□ -0.89
CLK4-202ENST00000519132 KIAA0825Q8IV33 1275 aa9.48□□□□□ -0.89
CLK4-202ENST00000519132 PLD4Q96BZ4 506 aa9.48□□□□□ -0.89
CLK4-202ENST00000519132 METTL14Q9HCE5 456 aaKnown RBP9.48□□□□□ -0.89
CLK4-202ENST00000519132 KDM5DQ9BY66 1539 aa9.48□□□□□ -0.89
CLK4-202ENST00000519132 GYS2P54840 703 aa9.48□□□□□ -0.89
CLK4-202ENST00000519132 SQSTM1Q13501 440 aa9.47□□□□□ -0.89
CLK4-202ENST00000519132 SPAG9O60271 1321 aaKnown RBP9.47□□□□□ -0.89
CLK4-202ENST00000519132 CDC45O75419 566 aa9.47□□□□□ -0.89
CLK4-202ENST00000519132 S100BP04271 92 aaPredicted RBP9.47□□□□□ -0.89
CLK4-202ENST00000519132 RASGRP4Q8TDF6 673 aa9.47□□□□□ -0.89
CLK4-202ENST00000519132 DEPDC5O75140 1603 aa9.47□□□□□ -0.89
CLK4-202ENST00000519132 EREGO14944 169 aa9.47□□□□□ -0.89
CLK4-202ENST00000519132 USP5P45974 858 aa9.47□□□□□ -0.89
CLK4-202ENST00000519132 ANKRD13DQ6ZTN6 518 aa9.47□□□□□ -0.89
CLK4-202ENST00000519132 AFAP1Q8N556 730 aa9.47□□□□□ -0.89
CLK4-202ENST00000519132 MAGI2Q86UL8 1455 aa9.46□□□□□ -0.89
CLK4-202ENST00000519132 TRIM37O94972 964 aa9.46□□□□□ -0.9
CLK4-202ENST00000519132 TRIM32Q13049 653 aa9.46□□□□□ -0.9
CLK4-202ENST00000519132 ABCA6Q8N139 1617 aa9.46□□□□□ -0.9
CLK4-202ENST00000519132 GBP2P32456 591 aaPredicted RBP9.45□□□□□ -0.9
CLK4-202ENST00000519132 CDKN1CP49918 316 aaPredicted RBP9.45□□□□□ -0.9
CLK4-202ENST00000519132 LSM11P83369 360 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLK4-202ENST00000519132 NFX1Q12986 1120 aaKnown RBP9.45□□□□□ -0.9
CLK4-202ENST00000519132 ZNF296Q8WUU4 475 aaPredicted RBP9.45□□□□□ -0.9
CLK4-202ENST00000519132 EMP3P54852 163 aa9.45□□□□□ -0.9
CLK4-202ENST00000519132 GRM2Q14416 872 aa9.45□□□□□ -0.9
CLK4-202ENST00000519132 RTN1Q16799 776 aa9.45□□□□□ -0.9
CLK4-202ENST00000519132 ODR4Q5SWX8 454 aa9.45□□□□□ -0.9
CLK4-202ENST00000519132 MYH16Q9H6N6 1097 aa9.45□□□□□ -0.9
CLK4-202ENST00000519132 SGSM3Q96HU1 749 aa9.45□□□□□ -0.9
CLK4-202ENST00000519132 AGBL1Q96MI9 1066 aa9.45□□□□□ -0.9
CLK4-202ENST00000519132 FAM8A1Q9UBU6 413 aa9.45□□□□□ -0.9
CLK4-202ENST00000519132 REREQ9P2R6 1566 aa9.44□□□□□ -0.9
CLK4-202ENST00000519132 DIP2CQ9Y2E4 1556 aa9.44□□□□□ -0.9
CLK4-202ENST00000519132 CLSTN1O94985 981 aa9.44□□□□□ -0.9
CLK4-202ENST00000519132 POTEAQ6S8J7 498 aa9.44□□□□□ -0.9
CLK4-202ENST00000519132 TEX2Q8IWB9 1127 aa9.44□□□□□ -0.9
CLK4-202ENST00000519132 IQGAP3Q86VI3 1631 aa9.44□□□□□ -0.9
CLK4-202ENST00000519132 SMAD7O15105 426 aaKnown RBP9.44□□□□□ -0.9
CLK4-202ENST00000519132 GRNP28799 593 aaKnown RBP9.44□□□□□ -0.9
CLK4-202ENST00000519132 CCDC85BQ15834 202 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms