RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 TRAPPC3LQ5T215 181 aa9.34□□□□□ -0.91
SQLE-203ENST00000518931 ZKSCAN3Q9BRR0 538 aa9.34□□□□□ -0.91
SQLE-203ENST00000518931 LACRTQ9GZZ8 138 aa9.34□□□□□ -0.91
SQLE-203ENST00000518931 SUV39H2Q9H5I1 410 aa9.34□□□□□ -0.91
SQLE-203ENST00000518931 IRS1P35568 1242 aa9.33□□□□□ -0.92
SQLE-203ENST00000518931 ENOX2Q16206 610 aaKnown RBP9.33□□□□□ -0.92
SQLE-203ENST00000518931 MSL1Q68DK7 614 aa9.33□□□□□ -0.92
SQLE-203ENST00000518931 DMRTC2Q8IXT2 367 aaPredicted RBP9.33□□□□□ -0.92
SQLE-203ENST00000518931 IL22RA1Q8N6P7 574 aa9.33□□□□□ -0.92
SQLE-203ENST00000518931 HHIPQ96QV1 700 aa9.33□□□□□ -0.92
SQLE-203ENST00000518931 NPHS2Q9NP85 383 aa9.33□□□□□ -0.92
SQLE-203ENST00000518931 CCDC9Q9Y3X0 531 aaKnown RBP9.33□□□□□ -0.92
SQLE-203ENST00000518931 A0A1W2PP55 124 aa9.32□□□□□ -0.92
SQLE-203ENST00000518931 PDE2AO00408 941 aaPredicted RBP9.32□□□□□ -0.92
SQLE-203ENST00000518931 P4HBP07237 508 aaKnown RBP9.32□□□□□ -0.92
SQLE-203ENST00000518931 ADAMTSL4Q6UY14 1074 aa9.32□□□□□ -0.92
SQLE-203ENST00000518931 WFDC8Q8IUA0 241 aa9.32□□□□□ -0.92
SQLE-203ENST00000518931 EPS8L3Q8TE67 593 aaKnown RBP9.32□□□□□ -0.92
SQLE-203ENST00000518931 NXPE3Q969Y0 559 aa9.32□□□□□ -0.92
SQLE-203ENST00000518931 WWC3Q9ULE0 1092 aa9.32□□□□□ -0.92
SQLE-203ENST00000518931 TMEM102Q8N9M5 508 aaPredicted RBP9.31□□□□□ -0.92
SQLE-203ENST00000518931 GADD45BO75293 160 aaPredicted RBP9.3□□□□□ -0.92
SQLE-203ENST00000518931 PTPRAP18433 802 aa9.3□□□□□ -0.92
SQLE-203ENST00000518931 BAG6P46379 1132 aa9.3□□□□□ -0.92
SQLE-203ENST00000518931 CACTIN-AS1Q8N1I8 211 aa9.3□□□□□ -0.92
SQLE-203ENST00000518931 SETDB2Q96T68 719 aa9.3□□□□□ -0.92
SQLE-203ENST00000518931 SH2B1Q9NRF2 756 aaPredicted RBP9.3□□□□□ -0.92
SQLE-203ENST00000518931 NLRP2Q9NX02 1062 aa9.3□□□□□ -0.92
SQLE-203ENST00000518931 NOP53Q9NZM5 478 aaKnown RBP9.3□□□□□ -0.92
SQLE-203ENST00000518931 RNF225M0QZC1 329 aaPredicted RBP9.29□□□□□ -0.92
SQLE-203ENST00000518931 CDC27P30260 824 aa9.29□□□□□ -0.92
SQLE-203ENST00000518931 MFAP1P55081 439 aaKnown RBP9.29□□□□□ -0.92
SQLE-203ENST00000518931 KIAA0319Q5VV43 1072 aa9.29□□□□□ -0.92
SQLE-203ENST00000518931 PI16Q6UXB8 463 aa9.29□□□□□ -0.92
SQLE-203ENST00000518931 NPAS4Q8IUM7 802 aa9.29□□□□□ -0.92
SQLE-203ENST00000518931 ASAP3Q8TDY4 903 aa9.29□□□□□ -0.92
SQLE-203ENST00000518931 EHD4Q9H223 541 aa9.29□□□□□ -0.92
SQLE-203ENST00000518931 LIN7BQ9HAP6 207 aa9.29□□□□□ -0.92
SQLE-203ENST00000518931 SPDYE3A6NKU9 549 aa9.28□□□□□ -0.92
SQLE-203ENST00000518931 FAM229AH3BQW9 127 aa9.28□□□□□ -0.92
SQLE-203ENST00000518931 ERCC3P19447 782 aa9.28□□□□□ -0.92
SQLE-203ENST00000518931 COL8A1P27658 744 aa9.28□□□□□ -0.92
SQLE-203ENST00000518931 CDC25BP30305 580 aa9.28□□□□□ -0.92
SQLE-203ENST00000518931 ATP2B2Q01814 1243 aa9.28□□□□□ -0.92
SQLE-203ENST00000518931 TRIM28Q13263 835 aaKnown RBP9.28□□□□□ -0.92
SQLE-203ENST00000518931 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.28□□□□□ -0.92
SQLE-203ENST00000518931 ILDR2Q71H61 639 aa9.28□□□□□ -0.92
SQLE-203ENST00000518931 ADAM19Q9H013 955 aa9.28□□□□□ -0.92
SQLE-203ENST00000518931 PPME1Q9Y570 386 aa9.28□□□□□ -0.92
SQLE-203ENST00000518931 A0A0A0MRY4 1105 aa9.27□□□□□ -0.93
SQLE-203ENST00000518931 FAM177BA6PVY3 158 aa9.27□□□□□ -0.93
SQLE-203ENST00000518931 LDHBP07195 334 aaKnown RBP9.27□□□□□ -0.93
SQLE-203ENST00000518931 KCNMA1Q12791 1236 aa9.27□□□□□ -0.93
SQLE-203ENST00000518931 COL19A1Q14993 1142 aa9.27□□□□□ -0.93
SQLE-203ENST00000518931 EAPPQ56P03 285 aaPredicted RBP9.27□□□□□ -0.93
SQLE-203ENST00000518931 ALG1LQ6GMV1 187 aa9.27□□□□□ -0.93
SQLE-203ENST00000518931 TCF12Q99081 682 aa9.27□□□□□ -0.93
SQLE-203ENST00000518931 METTL12A8MUP2 240 aa9.26□□□□□ -0.93
SQLE-203ENST00000518931 LINC01387J3KSC0 135 aa9.26□□□□□ -0.93
SQLE-203ENST00000518931 CCNJLQ8IV13 435 aa9.26□□□□□ -0.93
SQLE-203ENST00000518931 BSNDQ8WZ55 320 aa9.26□□□□□ -0.93
SQLE-203ENST00000518931 BHLHE41Q9C0J9 482 aaPredicted RBP9.26□□□□□ -0.93
SQLE-203ENST00000518931 MUC3BQ9H195 1237 aa9.26□□□□□ -0.93
SQLE-203ENST00000518931 GRIA4P48058 902 aa9.25□□□□□ -0.93
SQLE-203ENST00000518931 RAC1P63000 192 aa9.25□□□□□ -0.93
SQLE-203ENST00000518931 RASSF7Q02833 373 aa9.25□□□□□ -0.93
SQLE-203ENST00000518931 GRM2Q14416 872 aa9.25□□□□□ -0.93
SQLE-203ENST00000518931 SPRED3Q2MJR0 410 aa9.25□□□□□ -0.93
SQLE-203ENST00000518931 PRRT3Q5FWE3 981 aa9.25□□□□□ -0.93
SQLE-203ENST00000518931 FBF1Q8TES7 1133 aa9.25□□□□□ -0.93
SQLE-203ENST00000518931 A0A096LPE4 126 aa9.24□□□□□ -0.93
SQLE-203ENST00000518931 A0A1W2PPZ6 126 aa9.24□□□□□ -0.93
SQLE-203ENST00000518931 EPHA1P21709 976 aa9.24□□□□□ -0.93
SQLE-203ENST00000518931 CABP4P57796 275 aa9.24□□□□□ -0.93
SQLE-203ENST00000518931 TXNDC11Q6PKC3 985 aa9.24□□□□□ -0.93
SQLE-203ENST00000518931 BCO2Q9BYV7 579 aa9.24□□□□□ -0.93
SQLE-203ENST00000518931 PPP4R2Q9NY27 417 aa9.24□□□□□ -0.93
SQLE-203ENST00000518931 GSK3AP49840 483 aa9.23□□□□□ -0.93
SQLE-203ENST00000518931 NXPE4Q6UWF7 544 aa9.23□□□□□ -0.93
SQLE-203ENST00000518931 FMR1NBQ8N0W7 255 aaPredicted RBP9.23□□□□□ -0.93
SQLE-203ENST00000518931 DTWD1Q8N5C7 304 aa9.23□□□□□ -0.93
SQLE-203ENST00000518931 SOX13Q9UN79 622 aa9.23□□□□□ -0.93
SQLE-203ENST00000518931 TRAK1Q9UPV9 953 aa9.23□□□□□ -0.93
SQLE-203ENST00000518931 DEAF1O75398 565 aaPredicted RBP9.22□□□□□ -0.93
SQLE-203ENST00000518931 HMGB1P09429 215 aaKnown RBP9.22□□□□□ -0.93
SQLE-203ENST00000518931 SPATA31C1P0DKV0 1188 aa9.22□□□□□ -0.93
SQLE-203ENST00000518931 SETDB1Q15047 1291 aa9.22□□□□□ -0.93
SQLE-203ENST00000518931 GRIK4Q16099 956 aa9.22□□□□□ -0.93
SQLE-203ENST00000518931 FAM117BQ6P1L5 589 aa9.22□□□□□ -0.93
SQLE-203ENST00000518931 FBXO11Q86XK2 927 aa9.22□□□□□ -0.93
SQLE-203ENST00000518931 DCAF5Q96JK2 942 aa9.22□□□□□ -0.93
SQLE-203ENST00000518931 TMEM238LA0A1B0GVL6 79 aa9.21□□□□□ -0.94
SQLE-203ENST00000518931 PRPF40AO75400 957 aaKnown RBP9.21□□□□□ -0.94
SQLE-203ENST00000518931 GDF11O95390 407 aa9.21□□□□□ -0.94
SQLE-203ENST00000518931 FGD1P98174 961 aa9.21□□□□□ -0.94
SQLE-203ENST00000518931 TAGLNQ01995 201 aaKnown RBP9.21□□□□□ -0.94
SQLE-203ENST00000518931 VN1R5Q7Z5H4 357 aa9.21□□□□□ -0.94
SQLE-203ENST00000518931 FBXO33Q7Z6M2 555 aa9.21□□□□□ -0.94
SQLE-203ENST00000518931 ALYREFQ86V81 257 aaKnown RBP9.21□□□□□ -0.94
SQLE-203ENST00000518931 GLIS3Q8NEA6 775 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms