RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 APBB1O00213 710 aa11.62□□□□□ -0.55
CLN8-203ENST00000518780 SEMA3EO15041 775 aa11.62□□□□□ -0.55
CLN8-203ENST00000518780 TIMM10P62072 90 aa11.62□□□□□ -0.55
CLN8-203ENST00000518780 CCDC158Q5M9N0 1113 aa11.62□□□□□ -0.55
CLN8-203ENST00000518780 GORABQ5T7V8 394 aa11.62□□□□□ -0.55
CLN8-203ENST00000518780 ZNF804AQ7Z570 1209 aa11.62□□□□□ -0.55
CLN8-203ENST00000518780 FBXO33Q7Z6M2 555 aa11.62□□□□□ -0.55
CLN8-203ENST00000518780 XAGE2Q96GT9 111 aa11.62□□□□□ -0.55
CLN8-203ENST00000518780 NEUROD6Q96NK8 337 aa11.62□□□□□ -0.55
CLN8-203ENST00000518780 IL1RAPL2Q9NP60 686 aa11.62□□□□□ -0.55
CLN8-203ENST00000518780 IRS2Q9Y4H2 1338 aa11.61□□□□□ -0.55
CLN8-203ENST00000518780 LRRC37AA6NMS7 1700 aa11.61□□□□□ -0.55
CLN8-203ENST00000518780 NFKBIEO00221 500 aa11.61□□□□□ -0.55
CLN8-203ENST00000518780 IGSF3O75054 1194 aa11.61□□□□□ -0.55
CLN8-203ENST00000518780 UQCRFS1P1P0C7P4 283 aa11.61□□□□□ -0.55
CLN8-203ENST00000518780 HIBADHP31937 336 aaKnown RBP11.61□□□□□ -0.55
CLN8-203ENST00000518780 OLFM4Q6UX06 510 aa11.61□□□□□ -0.55
CLN8-203ENST00000518780 ARHGAP27Q6ZUM4 889 aa11.61□□□□□ -0.55
CLN8-203ENST00000518780 PODNQ7Z5L7 613 aa11.61□□□□□ -0.55
CLN8-203ENST00000518780 VPS37DQ86XT2 251 aa11.61□□□□□ -0.55
CLN8-203ENST00000518780 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.61□□□□□ -0.55
CLN8-203ENST00000518780 FAM84BQ96KN1 310 aaPredicted RBP11.61□□□□□ -0.55
CLN8-203ENST00000518780 TTC41PQ6P2S7 1318 aa11.6□□□□□ -0.55
CLN8-203ENST00000518780 ZNF609O15014 1411 aa11.6□□□□□ -0.55
CLN8-203ENST00000518780 SLX4Q8IY92 1834 aa11.6□□□□□ -0.55
CLN8-203ENST00000518780 COL4A1P02462 1669 aa11.6□□□□□ -0.55
CLN8-203ENST00000518780 G3V3G9 751 aa11.6□□□□□ -0.55
CLN8-203ENST00000518780 ERC2O15083 957 aa11.6□□□□□ -0.55
CLN8-203ENST00000518780 YBX3P16989 372 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLN8-203ENST00000518780 LMNB1P20700 586 aa11.6□□□□□ -0.55
CLN8-203ENST00000518780 IARSP41252 1262 aaKnown RBP11.6□□□□□ -0.55
CLN8-203ENST00000518780 DCAF8Q5TAQ9 597 aa11.6□□□□□ -0.55
CLN8-203ENST00000518780 CCDC102BQ68D86 513 aa11.6□□□□□ -0.55
CLN8-203ENST00000518780 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
CLN8-203ENST00000518780 JDP2Q8WYK2 163 aa11.6□□□□□ -0.55
CLN8-203ENST00000518780 LNPKQ9C0E8 428 aa11.6□□□□□ -0.55
CLN8-203ENST00000518780 OSBPL3Q9H4L5 887 aa11.6□□□□□ -0.55
CLN8-203ENST00000518780 ECHDC1Q9NTX5 307 aa11.6□□□□□ -0.55
CLN8-203ENST00000518780 STAP2Q9UGK3 403 aa11.6□□□□□ -0.55
CLN8-203ENST00000518780 DBNLQ9UJU6 430 aaKnown RBP11.6□□□□□ -0.55
CLN8-203ENST00000518780 AOX1Q06278 1338 aa11.6□□□□□ -0.55
CLN8-203ENST00000518780 PDS5AQ29RF7 1337 aaKnown RBP11.6□□□□□ -0.55
CLN8-203ENST00000518780 PPIP5K2O43314 1243 aa11.59□□□□□ -0.55
CLN8-203ENST00000518780 SMARCA5O60264 1052 aaPredicted RBP11.59□□□□□ -0.55
CLN8-203ENST00000518780 IL1R1P14778 569 aa11.59□□□□□ -0.55
CLN8-203ENST00000518780 ATP5JP18859 108 aa11.59□□□□□ -0.55
CLN8-203ENST00000518780 LARGE2Q8N3Y3 721 aa11.59□□□□□ -0.55
CLN8-203ENST00000518780 DBNDD2Q9BQY9 259 aa11.59□□□□□ -0.55
CLN8-203ENST00000518780 CCDC8Q9H0W5 538 aaPredicted RBP11.59□□□□□ -0.55
CLN8-203ENST00000518780 WWC3Q9ULE0 1092 aa11.59□□□□□ -0.55
CLN8-203ENST00000518780 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.59□□□□□ -0.55
CLN8-203ENST00000518780 BRCA1P38398 1863 aaKnown RBP11.58□□□□□ -0.56
CLN8-203ENST00000518780 SNAP23O00161 211 aa11.58□□□□□ -0.56
CLN8-203ENST00000518780 GLRX3O76003 335 aaKnown RBP11.58□□□□□ -0.56
CLN8-203ENST00000518780 MX1P20591 662 aa11.58□□□□□ -0.56
CLN8-203ENST00000518780 ARID4AP29374 1257 aaPredicted RBP11.58□□□□□ -0.56
CLN8-203ENST00000518780 TTC39AQ5SRH9 613 aa11.58□□□□□ -0.56
CLN8-203ENST00000518780 TICAM2Q86XR7 235 aa11.58□□□□□ -0.56
CLN8-203ENST00000518780 NIM1KQ8IY84 436 aa11.58□□□□□ -0.56
CLN8-203ENST00000518780 TDRD7Q8NHU6 1098 aaKnown RBP11.58□□□□□ -0.56
CLN8-203ENST00000518780 CD209Q9NNX6 404 aa11.58□□□□□ -0.56
CLN8-203ENST00000518780 ZNF277Q9NRM2 450 aaPredicted RBP11.58□□□□□ -0.56
CLN8-203ENST00000518780 DENND2AQ9ULE3 1009 aa11.58□□□□□ -0.56
CLN8-203ENST00000518780 ZNRF3Q9ULT6 936 aa11.58□□□□□ -0.56
CLN8-203ENST00000518780 SALL3Q9BXA9 1300 aa11.58□□□□□ -0.56
CLN8-203ENST00000518780 ZC3H4Q9UPT8 1303 aaKnown RBP11.58□□□□□ -0.56
CLN8-203ENST00000518780 WTIPA6NIX2 430 aaPredicted RBP11.57□□□□□ -0.56
CLN8-203ENST00000518780 RIMBP2O15034 1052 aa11.57□□□□□ -0.56
CLN8-203ENST00000518780 ADORA1P30542 326 aa11.57□□□□□ -0.56
CLN8-203ENST00000518780 GYG1P46976 350 aa11.57□□□□□ -0.56
CLN8-203ENST00000518780 MMP14P50281 582 aa11.57□□□□□ -0.56
CLN8-203ENST00000518780 BCAMP50895 628 aa11.57□□□□□ -0.56
CLN8-203ENST00000518780 PDE1AP54750 535 aa11.57□□□□□ -0.56
CLN8-203ENST00000518780 AOC3Q16853 763 aa11.57□□□□□ -0.56
CLN8-203ENST00000518780 TMED8Q6PL24 325 aaPredicted RBP11.57□□□□□ -0.56
CLN8-203ENST00000518780 TXNRD3Q86VQ6 643 aa11.57□□□□□ -0.56
CLN8-203ENST00000518780 SRCAPQ6ZRS2 3230 aa11.56□□□□□ -0.56
CLN8-203ENST00000518780 ARFGEF1Q9Y6D6 1849 aa11.56□□□□□ -0.56
CLN8-203ENST00000518780 FRAT2O75474 233 aaPredicted RBP11.56□□□□□ -0.56
CLN8-203ENST00000518780 KLRK1P26718 216 aa11.56□□□□□ -0.56
CLN8-203ENST00000518780 PHKA1P46020 1223 aa11.56□□□□□ -0.56
CLN8-203ENST00000518780 FKBP1AP62942 108 aaKnown RBP11.56□□□□□ -0.56
CLN8-203ENST00000518780 LTBP1Q14766 1721 aa11.56□□□□□ -0.56
CLN8-203ENST00000518780 STRIP1Q5VSL9 837 aa11.56□□□□□ -0.56
CLN8-203ENST00000518780 SLC51AQ86UW1 340 aa11.56□□□□□ -0.56
CLN8-203ENST00000518780 PLEKHM2Q8IWE5 1019 aa11.56□□□□□ -0.56
CLN8-203ENST00000518780 C16orf71Q8IYS4 520 aaPredicted RBP11.56□□□□□ -0.56
CLN8-203ENST00000518780 ZGPATQ8N5A5 531 aaKnown RBP11.56□□□□□ -0.56
CLN8-203ENST00000518780 WDR66Q8TBY9 1149 aa11.56□□□□□ -0.56
CLN8-203ENST00000518780 TBC1D22AQ8WUA7 517 aa11.56□□□□□ -0.56
CLN8-203ENST00000518780 DUOX1Q9NRD9 1551 aa11.56□□□□□ -0.56
CLN8-203ENST00000518780 TLR7Q9NYK1 1049 aaKnown RBP11.56□□□□□ -0.56
CLN8-203ENST00000518780 SUGT1Q9Y2Z0 365 aa11.56□□□□□ -0.56
CLN8-203ENST00000518780 FAM205AQ6ZU69 1335 aa11.56□□□□□ -0.56
CLN8-203ENST00000518780 TAF1P21675 1872 aa11.55□□□□□ -0.56
CLN8-203ENST00000518780 FZD9O00144 591 aa11.55□□□□□ -0.56
CLN8-203ENST00000518780 ECE2O60344 883 aa11.55□□□□□ -0.56
CLN8-203ENST00000518780 TNIP1Q15025 636 aa11.55□□□□□ -0.56
CLN8-203ENST00000518780 TTF1Q15361 905 aaPredicted RBP11.55□□□□□ -0.56
CLN8-203ENST00000518780 SPATA5Q8NB90 893 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms