RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 SALL3Q9BXA9 1300 aa12.91□□□□□ -0.34
BRD9-216ENST00000518251 SASH1O94885 1247 aa12.91□□□□□ -0.34
BRD9-216ENST00000518251 HCLS1P14317 486 aaPredicted RBP12.91□□□□□ -0.34
BRD9-216ENST00000518251 IFIT5Q13325 482 aaKnown RBP12.91□□□□□ -0.34
BRD9-216ENST00000518251 TAF7LQ5H9L4 462 aa12.91□□□□□ -0.34
BRD9-216ENST00000518251 CLASRPQ8N2M8 674 aaKnown RBP12.91□□□□□ -0.34
BRD9-216ENST00000518251 OTUD7AQ8TE49 926 aaPredicted RBP12.91□□□□□ -0.34
BRD9-216ENST00000518251 JDP2Q8WYK2 163 aa12.91□□□□□ -0.34
BRD9-216ENST00000518251 CCDC85AQ96PX6 553 aaPredicted RBP12.91□□□□□ -0.34
BRD9-216ENST00000518251 FBXO3Q9UK99 471 aa12.91□□□□□ -0.34
BRD9-216ENST00000518251 RTL9Q8NET4 1388 aa12.91□□□□□ -0.34
BRD9-216ENST00000518251 ANKRD18BA2A2Z9 1011 aa12.9□□□□□ -0.34
BRD9-216ENST00000518251 TRAF5O00463 557 aa12.9□□□□□ -0.34
BRD9-216ENST00000518251 CIAO1O76071 339 aa12.9□□□□□ -0.34
BRD9-216ENST00000518251 MX1P20591 662 aa12.9□□□□□ -0.34
BRD9-216ENST00000518251 ITGA6P23229 1130 aa12.9□□□□□ -0.34
BRD9-216ENST00000518251 GTF2E1P29083 439 aaPredicted RBP12.9□□□□□ -0.34
BRD9-216ENST00000518251 LMOD1P29536 600 aaPredicted RBP12.9□□□□□ -0.34
BRD9-216ENST00000518251 HOXA10P31260 410 aaPredicted RBP12.9□□□□□ -0.34
BRD9-216ENST00000518251 EPS15P42566 896 aa12.9□□□□□ -0.34
BRD9-216ENST00000518251 BMP2KLQ5H9B9 411 aa12.9□□□□□ -0.34
BRD9-216ENST00000518251 CC2D2BQ6DHV5 1058 aa12.9□□□□□ -0.34
BRD9-216ENST00000518251 C3orf67Q6ZVT6 689 aa12.9□□□□□ -0.34
BRD9-216ENST00000518251 CAPNS2Q96L46 248 aa12.9□□□□□ -0.34
BRD9-216ENST00000518251 OSBPL3Q9H4L5 887 aa12.9□□□□□ -0.34
BRD9-216ENST00000518251 GREM2Q9H772 168 aa12.9□□□□□ -0.34
BRD9-216ENST00000518251 TSHZ2Q9NRE2 1034 aa12.9□□□□□ -0.34
BRD9-216ENST00000518251 GJA3Q9Y6H8 435 aa12.9□□□□□ -0.34
BRD9-216ENST00000518251 DUOX1Q9NRD9 1551 aa12.9□□□□□ -0.35
BRD9-216ENST00000518251 AOX1Q06278 1338 aa12.89□□□□□ -0.35
BRD9-216ENST00000518251 EYA2O00167 538 aa12.89□□□□□ -0.35
BRD9-216ENST00000518251 PPEF1O14829 653 aaPredicted RBP12.89□□□□□ -0.35
BRD9-216ENST00000518251 IL15P40933 162 aaPredicted RBP12.89□□□□□ -0.35
BRD9-216ENST00000518251 EIF6P56537 245 aaKnown RBP12.89□□□□□ -0.35
BRD9-216ENST00000518251 C8orf34Q49A92 452 aa12.89□□□□□ -0.35
BRD9-216ENST00000518251 CCDC152Q4G0S7 254 aa12.89□□□□□ -0.35
BRD9-216ENST00000518251 TTC22Q5TAA0 569 aa12.89□□□□□ -0.35
BRD9-216ENST00000518251 CST9Q5W186 159 aa12.89□□□□□ -0.35
BRD9-216ENST00000518251 CYP4F22Q6NT55 531 aa12.89□□□□□ -0.35
BRD9-216ENST00000518251 RPGRQ92834 1020 aaKnown RBP12.89□□□□□ -0.35
BRD9-216ENST00000518251 ZNF594Q96JF6 807 aaPredicted RBP12.89□□□□□ -0.35
BRD9-216ENST00000518251 TLL2Q9Y6L7 1015 aa12.89□□□□□ -0.35
BRD9-216ENST00000518251 SPEF2Q9C093 1822 aa12.89□□□□□ -0.35
BRD9-216ENST00000518251 ZNF609O15014 1411 aa12.88□□□□□ -0.35
BRD9-216ENST00000518251 PDE1AP54750 535 aa12.88□□□□□ -0.35
BRD9-216ENST00000518251 SLC10A5Q5PT55 438 aa12.88□□□□□ -0.35
BRD9-216ENST00000518251 USP50Q70EL3 339 aaPredicted RBP12.88□□□□□ -0.35
BRD9-216ENST00000518251 ATG9AQ7Z3C6 839 aa12.88□□□□□ -0.35
BRD9-216ENST00000518251 AACSQ86V21 672 aa12.88□□□□□ -0.35
BRD9-216ENST00000518251 LARGE2Q8N3Y3 721 aa12.88□□□□□ -0.35
BRD9-216ENST00000518251 BACH2Q9BYV9 841 aa12.88□□□□□ -0.35
BRD9-216ENST00000518251 STAP2Q9UGK3 403 aa12.88□□□□□ -0.35
BRD9-216ENST00000518251 IFIT2P09913 472 aaKnown RBP12.87□□□□□ -0.35
BRD9-216ENST00000518251 GSPT1P15170 499 aaKnown RBP12.87□□□□□ -0.35
BRD9-216ENST00000518251 ECE1P42892 770 aa12.87□□□□□ -0.35
BRD9-216ENST00000518251 TFCP2Q12800 502 aa12.87□□□□□ -0.35
BRD9-216ENST00000518251 SF3B3Q15393 1217 aaKnown RBP12.87□□□□□ -0.35
BRD9-216ENST00000518251 LRRC24Q50LG9 513 aa12.87□□□□□ -0.35
BRD9-216ENST00000518251 PAXIP1Q6ZW49 1069 aaPredicted RBP12.87□□□□□ -0.35
BRD9-216ENST00000518251 GPATCH3Q96I76 525 aa12.87□□□□□ -0.35
BRD9-216ENST00000518251 TTC41PQ6P2S7 1318 aa12.87□□□□□ -0.35
BRD9-216ENST00000518251 LRRC37AA6NMS7 1700 aa12.86□□□□□ -0.35
BRD9-216ENST00000518251 GRM1Q13255 1194 aa12.86□□□□□ -0.35
BRD9-216ENST00000518251 AOC3Q16853 763 aa12.86□□□□□ -0.35
BRD9-216ENST00000518251 GRIPAP1Q4V328 841 aa12.86□□□□□ -0.35
BRD9-216ENST00000518251 TNNI3KQ59H18 835 aa12.86□□□□□ -0.35
BRD9-216ENST00000518251 NIM1KQ8IY84 436 aa12.86□□□□□ -0.35
BRD9-216ENST00000518251 EAF2Q96CJ1 260 aaPredicted RBP12.86□□□□□ -0.35
BRD9-216ENST00000518251 GPR101Q96P66 508 aaPredicted RBP12.86□□□□□ -0.35
BRD9-216ENST00000518251 CRAMP1Q96RY5 1269 aa12.86□□□□□ -0.35
BRD9-216ENST00000518251 PUS3Q9BZE2 481 aaKnown RBP12.86□□□□□ -0.35
BRD9-216ENST00000518251 GPR108Q9NPR9 543 aa12.86□□□□□ -0.35
BRD9-216ENST00000518251 GPRC5DQ9NZD1 345 aa12.86□□□□□ -0.35
BRD9-216ENST00000518251 TSKSQ9UJT2 592 aa12.86□□□□□ -0.35
BRD9-216ENST00000518251 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
BRD9-216ENST00000518251 FPGT-TNNI3KV9GXZ4 949 aa12.86□□□□□ -0.35
BRD9-216ENST00000518251 ARAP2Q8WZ64 1704 aa12.85□□□□□ -0.35
BRD9-216ENST00000518251 A0A1B0GUL6 1792 aa12.85□□□□□ -0.35
BRD9-216ENST00000518251 PPIP5K2O43314 1243 aa12.85□□□□□ -0.35
BRD9-216ENST00000518251 AOC2O75106 756 aa12.85□□□□□ -0.35
BRD9-216ENST00000518251 TSHZ3Q63HK5 1081 aa12.85□□□□□ -0.35
BRD9-216ENST00000518251 LDHAL6AQ6ZMR3 332 aa12.85□□□□□ -0.35
BRD9-216ENST00000518251 SAPCD2Q86UD0 394 aa12.85□□□□□ -0.35
BRD9-216ENST00000518251 NLRP3Q96P20 1036 aa12.85□□□□□ -0.35
BRD9-216ENST00000518251 CDC5LQ99459 802 aaKnown RBP12.85□□□□□ -0.35
BRD9-216ENST00000518251 CNNM1Q9NRU3 951 aa12.85□□□□□ -0.35
BRD9-216ENST00000518251 ADARB2Q9NS39 739 aaKnown RBP12.85□□□□□ -0.35
BRD9-216ENST00000518251 TRPM7Q96QT4 1865 aa12.85□□□□□ -0.35
BRD9-216ENST00000518251 ERC2O15083 957 aa12.84□□□□□ -0.35
BRD9-216ENST00000518251 IGHMBP2P38935 993 aaKnown RBP12.84□□□□□ -0.35
BRD9-216ENST00000518251 RBM17Q96I25 401 aaKnown RBP12.84□□□□□ -0.35
BRD9-216ENST00000518251 CCDC8Q9H0W5 538 aaPredicted RBP12.84□□□□□ -0.35
BRD9-216ENST00000518251 SEC31BQ9NQW1 1179 aa12.84□□□□□ -0.35
BRD9-216ENST00000518251 ECHDC1Q9NTX5 307 aa12.84□□□□□ -0.35
BRD9-216ENST00000518251 CEP126Q9P2H0 1117 aa12.84□□□□□ -0.35
BRD9-216ENST00000518251 COL4A1P02462 1669 aa12.83□□□□□ -0.35
BRD9-216ENST00000518251 CDC45O75419 566 aa12.83□□□□□ -0.36
BRD9-216ENST00000518251 GLRX3O76003 335 aaKnown RBP12.83□□□□□ -0.36
BRD9-216ENST00000518251 RGS19P49795 217 aa12.83□□□□□ -0.36
BRD9-216ENST00000518251 METTL24Q5JXM2 366 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms