RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 KDM3BQ7LBC6 1761 aa9.42□□□□□ -0.9
TNFRSF11B-202ENST00000517352 PI4KAP2A4QPH2 592 aa9.41□□□□□ -0.9
TNFRSF11B-202ENST00000517352 FKBP1BP68106 108 aa9.41□□□□□ -0.9
TNFRSF11B-202ENST00000517352 TAF7LQ5H9L4 462 aa9.41□□□□□ -0.9
TNFRSF11B-202ENST00000517352 KSR2Q6VAB6 950 aa9.41□□□□□ -0.9
TNFRSF11B-202ENST00000517352 PI4KAP1Q8N8J0 262 aa9.41□□□□□ -0.9
TNFRSF11B-202ENST00000517352 ANKRD2Q9GZV1 360 aa9.41□□□□□ -0.9
TNFRSF11B-202ENST00000517352 MYH16Q9H6N6 1097 aa9.41□□□□□ -0.9
TNFRSF11B-202ENST00000517352 SAGE1Q9NXZ1 904 aa9.41□□□□□ -0.9
TNFRSF11B-202ENST00000517352 MYO3BQ8WXR4 1341 aa9.4□□□□□ -0.9
TNFRSF11B-202ENST00000517352 EGFRP00533 1210 aa9.4□□□□□ -0.9
TNFRSF11B-202ENST00000517352 CTSWP56202 376 aa9.4□□□□□ -0.9
TNFRSF11B-202ENST00000517352 MKRN4PQ13434 485 aaPredicted RBP9.4□□□□□ -0.9
TNFRSF11B-202ENST00000517352 FKBP5Q13451 457 aaPredicted RBP9.4□□□□□ -0.9
TNFRSF11B-202ENST00000517352 C8orf58Q8NAV2 365 aa9.4□□□□□ -0.9
TNFRSF11B-202ENST00000517352 PRKRIP1Q9H875 184 aaPredicted RBP9.4□□□□□ -0.9
TNFRSF11B-202ENST00000517352 RNF186Q9NXI6 227 aa9.4□□□□□ -0.9
TNFRSF11B-202ENST00000517352 PITPNM1O00562 1244 aa9.39□□□□□ -0.91
TNFRSF11B-202ENST00000517352 MYO1BO43795 1136 aa9.39□□□□□ -0.91
TNFRSF11B-202ENST00000517352 PRKG1Q13976 671 aa9.39□□□□□ -0.91
TNFRSF11B-202ENST00000517352 TWISTNBQ3B726 338 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF11B-202ENST00000517352 ARMC9Q7Z3E5 817 aa9.39□□□□□ -0.91
TNFRSF11B-202ENST00000517352 UBE3BQ7Z3V4 1068 aa9.39□□□□□ -0.91
TNFRSF11B-202ENST00000517352 BSDC1Q9NW68 430 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF11B-202ENST00000517352 LEMD3Q9Y2U8 911 aa9.39□□□□□ -0.91
TNFRSF11B-202ENST00000517352 SALL2Q9Y467 1007 aaPredicted RBP9.39□□□□□ -0.91
TNFRSF11B-202ENST00000517352 RTL9Q8NET4 1388 aa9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 ADAMTSL1Q8N6G6 1762 aa9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 ANKRD18BA2A2Z9 1011 aa9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 UBE2Q2LH0YL09 131 aa9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 SLC10A3P09131 477 aa9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 CCT4P50991 539 aaKnown RBP9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 RBM5P52756 815 aaKnown RBP eCLIP9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 ZNF280AP59817 542 aaPredicted RBP9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 SREBF2Q12772 1141 aa9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 MKRN3Q13064 507 aaKnown RBP9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 TTLL5Q6EMB2 1281 aa9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 TSR2Q969E8 191 aaKnown RBP9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 ZIC5Q96T25 663 aa9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 COA1Q9GZY4 146 aa9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 GREM2Q9H772 168 aa9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 MINPP1Q9UNW1 487 aa9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 DLG5Q8TDM6 1919 aa9.38□□□□□ -0.91
TNFRSF11B-202ENST00000517352 ZNF804BA4D1E1 1349 aa9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 LTBP1Q14766 1721 aa9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 ZNF853P0CG23 659 aa9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 MMP14P50281 582 aa9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 SOX10P56693 466 aa9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 GTF2IP78347 998 aa9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 IFIT5Q13325 482 aaKnown RBP9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 DLGAP5Q15398 846 aa9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 CWF19L2Q2TBE0 894 aaKnown RBP9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 STRIP1Q5VSL9 837 aa9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 PRAMEF18Q5VWM3 479 aa9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 CTU1Q7Z7A3 348 aaKnown RBP9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 APOBEC3FQ8IUX4 373 aaKnown RBP9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 KIAA0825Q8IV33 1275 aa9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 TTLL11Q8NHH1 800 aa9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 CSRNP1Q96S65 589 aa9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 SCAF8Q9UPN6 1271 aaKnown RBP9.37□□□□□ -0.91
TNFRSF11B-202ENST00000517352 ASTN2O75129 1339 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF11B-202ENST00000517352 PITPNM2Q9BZ72 1349 aa9.36□□□□□ -0.91
TNFRSF11B-202ENST00000517352 NEURL1BA8MQ27 555 aa9.36□□□□□ -0.91
TNFRSF11B-202ENST00000517352 FAM155AB1AL88 458 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF11B-202ENST00000517352 PPP1R12BO60237 982 aaPredicted RBP9.36□□□□□ -0.91
TNFRSF11B-202ENST00000517352 PLIN1O60240 522 aa9.36□□□□□ -0.91
TNFRSF11B-202ENST00000517352 SASH1O94885 1247 aa9.36□□□□□ -0.91
TNFRSF11B-202ENST00000517352 TBC1D8O95759 1140 aa9.36□□□□□ -0.91
TNFRSF11B-202ENST00000517352 ITGA6P23229 1130 aa9.36□□□□□ -0.91
TNFRSF11B-202ENST00000517352 PKN2Q16513 984 aaKnown RBP9.36□□□□□ -0.91
TNFRSF11B-202ENST00000517352 CCDC57Q2TAC2 916 aa9.36□□□□□ -0.91
TNFRSF11B-202ENST00000517352 NBPF9Q3BBW0 867 aa9.36□□□□□ -0.91
TNFRSF11B-202ENST00000517352 SLC10A4Q96EP9 437 aa9.36□□□□□ -0.91
TNFRSF11B-202ENST00000517352 CNNM1Q9NRU3 951 aa9.36□□□□□ -0.91
TNFRSF11B-202ENST00000517352 F8W031 263 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 ANP32CO43423 234 aa9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 FRAT2O75474 233 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 WDHD1O75717 1129 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 FLIIQ13045 1269 aa9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 TMEM132AQ24JP5 1023 aa9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 OTUD7BQ6GQQ9 843 aa9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 ZNF804AQ7Z570 1209 aa9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 RASAL3Q86YV0 1011 aa9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 TSPYL6Q8N831 410 aa9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 DNAAF4Q8WXU2 420 aa9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 MXD3Q9BW11 206 aa9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 VEZTQ9HBM0 779 aa9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 MRS2Q9HD23 443 aa9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 C9orf78Q9NZ63 289 aaPredicted RBP9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 ANGEL1Q9UNK9 670 aaKnown RBP9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 MED23Q9ULK4 1368 aa9.35□□□□□ -0.91
TNFRSF11B-202ENST00000517352 WNT10BO00744 389 aa9.34□□□□□ -0.91
TNFRSF11B-202ENST00000517352 ALDH1A1P00352 501 aa9.34□□□□□ -0.91
TNFRSF11B-202ENST00000517352 IGKV5-2P06315 115 aa9.34□□□□□ -0.91
TNFRSF11B-202ENST00000517352 RGS19P49795 217 aa9.34□□□□□ -0.91
TNFRSF11B-202ENST00000517352 GCKRQ14397 625 aa9.34□□□□□ -0.91
TNFRSF11B-202ENST00000517352 SUPT20HL1Q3ZLR7 823 aa9.34□□□□□ -0.91
TNFRSF11B-202ENST00000517352 DACT2Q5SW24 774 aa9.34□□□□□ -0.91
TNFRSF11B-202ENST00000517352 MOB2Q70IA6 237 aa9.34□□□□□ -0.91
TNFRSF11B-202ENST00000517352 VPS37DQ86XT2 251 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms