RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 SMNDC1O75940 238 aaKnown RBP eCLIP9.9□□□□□ -0.823e-23■■□□□ 13.8
SCARNA1-201ENST00000517138 FBXO11Q86XK2 927 aa9.9□□□□□ -0.82
SCARNA1-201ENST00000517138 ZKSCAN3Q9BRR0 538 aa9.9□□□□□ -0.82
SCARNA1-201ENST00000517138 LINC01387J3KSC0 135 aa9.89□□□□□ -0.83
SCARNA1-201ENST00000517138 APBA3O96018 575 aa9.89□□□□□ -0.83
SCARNA1-201ENST00000517138 EPHA1P21709 976 aa9.89□□□□□ -0.83
SCARNA1-201ENST00000517138 SETDB1Q15047 1291 aa9.89□□□□□ -0.83
SCARNA1-201ENST00000517138 OSMRQ99650 979 aa9.89□□□□□ -0.83
SCARNA1-201ENST00000517138 IGHA1P01876 353 aa9.88□□□□□ -0.83
SCARNA1-201ENST00000517138 GALNT11Q8NCW6 608 aa9.88□□□□□ -0.83
SCARNA1-201ENST00000517138 PMEPA1Q969W9 287 aa9.88□□□□□ -0.83
SCARNA1-201ENST00000517138 NIF3L1Q9GZT8 377 aa9.88□□□□□ -0.83
SCARNA1-201ENST00000517138 AMOTL2Q9Y2J4 779 aa9.88□□□□□ -0.83
SCARNA1-201ENST00000517138 PPME1Q9Y570 386 aa9.88□□□□□ -0.83
SCARNA1-201ENST00000517138 CDC27P30260 824 aa9.87□□□□□ -0.83
SCARNA1-201ENST00000517138 KCNA1Q09470 495 aa9.87□□□□□ -0.83
SCARNA1-201ENST00000517138 DTWD1Q8N5C7 304 aa9.87□□□□□ -0.83
SCARNA1-201ENST00000517138 TMC1Q8TDI8 760 aa9.87□□□□□ -0.83
SCARNA1-201ENST00000517138 PDE2AO00408 941 aaPredicted RBP9.86□□□□□ -0.83
SCARNA1-201ENST00000517138 DLL1O00548 723 aa9.86□□□□□ -0.83
SCARNA1-201ENST00000517138 TM4SF5O14894 197 aa9.86□□□□□ -0.83
SCARNA1-201ENST00000517138 TMC7Q7Z402 723 aa9.86□□□□□ -0.83
SCARNA1-201ENST00000517138 NXPE3Q969Y0 559 aa9.86□□□□□ -0.83
SCARNA1-201ENST00000517138 CARD10Q9BWT7 1032 aa9.86□□□□□ -0.83
SCARNA1-201ENST00000517138 RBCK1Q9BYM8 510 aa9.86□□□□□ -0.83
SCARNA1-201ENST00000517138 ADAM19Q9H013 955 aa9.86□□□□□ -0.83
SCARNA1-201ENST00000517138 METTL12A8MUP2 240 aa9.85□□□□□ -0.83
SCARNA1-201ENST00000517138 GATA4P43694 442 aa9.85□□□□□ -0.83
SCARNA1-201ENST00000517138 DOC2BQ14184 412 aa9.85□□□□□ -0.83
SCARNA1-201ENST00000517138 ADGRE1Q14246 886 aa9.85□□□□□ -0.83
SCARNA1-201ENST00000517138 MBTPS1Q14703 1052 aa9.85□□□□□ -0.83
SCARNA1-201ENST00000517138 HGSNATQ68CP4 663 aa9.85□□□□□ -0.83
SCARNA1-201ENST00000517138 LENG1Q96BZ8 264 aaPredicted RBP9.85□□□□□ -0.83
SCARNA1-201ENST00000517138 EDN3P14138 238 aa9.84□□□□□ -0.83
SCARNA1-201ENST00000517138 PTPRAP18433 802 aa9.84□□□□□ -0.83
SCARNA1-201ENST00000517138 PDE3BQ13370 1112 aa9.84□□□□□ -0.83
SCARNA1-201ENST00000517138 GALNT12Q8IXK2 581 aa9.84□□□□□ -0.83
SCARNA1-201ENST00000517138 TMEM102Q8N9M5 508 aaPredicted RBP9.84□□□□□ -0.83
SCARNA1-201ENST00000517138 CITED4Q96RK1 184 aa9.84□□□□□ -0.83
SCARNA1-201ENST00000517138 KCNK4Q9NYG8 393 aa9.84□□□□□ -0.83
SCARNA1-201ENST00000517138 DCTN4Q9UJW0 460 aa9.84□□□□□ -0.83
SCARNA1-201ENST00000517138 USP21Q9UK80 565 aa9.84□□□□□ -0.83
SCARNA1-201ENST00000517138 A0A1W2PP55 124 aa9.83□□□□□ -0.84
SCARNA1-201ENST00000517138 C9orf172C9J069 976 aa9.83□□□□□ -0.84
SCARNA1-201ENST00000517138 AEBP1Q8IUX7 1158 aa9.83□□□□□ -0.84
SCARNA1-201ENST00000517138 NACC1Q96RE7 527 aa9.83□□□□□ -0.84
SCARNA1-201ENST00000517138 EIF1AYO14602 144 aaKnown RBP9.82□□□□□ -0.84
SCARNA1-201ENST00000517138 FURINP09958 794 aa9.82□□□□□ -0.84
SCARNA1-201ENST00000517138 MAPK1P28482 360 aa9.82□□□□□ -0.84
SCARNA1-201ENST00000517138 FOXD4L6Q3SYB3 417 aaPredicted RBP9.82□□□□□ -0.84
SCARNA1-201ENST00000517138 FOXD4L3Q6VB84 417 aaPredicted RBP9.82□□□□□ -0.84
SCARNA1-201ENST00000517138 SOX13Q9UN79 622 aa9.82□□□□□ -0.84
SCARNA1-201ENST00000517138 FSCN2O14926 492 aa9.81□□□□□ -0.84
SCARNA1-201ENST00000517138 DDX3YO15523 660 aaKnown RBP9.81□□□□□ -0.84
SCARNA1-201ENST00000517138 ALX3O95076 343 aa9.81□□□□□ -0.84
SCARNA1-201ENST00000517138 WISP1O95388 367 aa9.81□□□□□ -0.84
SCARNA1-201ENST00000517138 IGF2-ASQ6U949 168 aa9.81□□□□□ -0.84
SCARNA1-201ENST00000517138 CACTIN-AS1Q8N1I8 211 aa9.81□□□□□ -0.84
SCARNA1-201ENST00000517138 ASAP3Q8TDY4 903 aa9.81□□□□□ -0.84
SCARNA1-201ENST00000517138 NPHS2Q9NP85 383 aa9.81□□□□□ -0.84
SCARNA1-201ENST00000517138 TPSG1Q9NRR2 321 aa9.81□□□□□ -0.84
SCARNA1-201ENST00000517138 CPNE3O75131 537 aaKnown RBP9.8□□□□□ -0.84
SCARNA1-201ENST00000517138 PDIA4P13667 645 aaKnown RBP9.8□□□□□ -0.84
SCARNA1-201ENST00000517138 VN1R5Q7Z5H4 357 aa9.8□□□□□ -0.84
SCARNA1-201ENST00000517138 KLHDC7BQ96G42 594 aa9.8□□□□□ -0.84
SCARNA1-201ENST00000517138 BHLHE41Q9C0J9 482 aaPredicted RBP9.8□□□□□ -0.84
SCARNA1-201ENST00000517138 MUC3BQ9H195 1237 aa9.8□□□□□ -0.84
SCARNA1-201ENST00000517138 ADAM11O75078 769 aa9.79□□□□□ -0.84
SCARNA1-201ENST00000517138 NOS3P29474 1203 aa9.79□□□□□ -0.84
SCARNA1-201ENST00000517138 GRIA4P48058 902 aa9.79□□□□□ -0.84
SCARNA1-201ENST00000517138 IREB2P48200 963 aaKnown RBP9.79□□□□□ -0.84
SCARNA1-201ENST00000517138 SPRED3Q2MJR0 410 aa9.79□□□□□ -0.84
SCARNA1-201ENST00000517138 AGGF1Q8N302 714 aaeCLIP9.79□□□□□ -0.84
SCARNA1-201ENST00000517138 WFDC12Q8WWY7 111 aa9.79□□□□□ -0.84
SCARNA1-201ENST00000517138 CCDC74AQ96AQ1 378 aa9.79□□□□□ -0.84
SCARNA1-201ENST00000517138 ALKBH8Q96BT7 664 aaKnown RBP9.79□□□□□ -0.84
SCARNA1-201ENST00000517138 DMRTB1Q96MA1 342 aa9.79□□□□□ -0.84
SCARNA1-201ENST00000517138 CSRNP1Q96S65 589 aa9.79□□□□□ -0.84
SCARNA1-201ENST00000517138 TCF12Q99081 682 aa9.79□□□□□ -0.84
SCARNA1-201ENST00000517138 H3BRJ5 948 aa9.78□□□□□ -0.84
SCARNA1-201ENST00000517138 NRG1Q02297 640 aaPredicted RBP9.78□□□□□ -0.84
SCARNA1-201ENST00000517138 DSC3Q14574 896 aa9.78□□□□□ -0.84
SCARNA1-201ENST00000517138 PI16Q6UXB8 463 aa9.78□□□□□ -0.84
SCARNA1-201ENST00000517138 TXNRD3Q86VQ6 643 aa9.78□□□□□ -0.84
SCARNA1-201ENST00000517138 SLC7A3Q8WY07 619 aa9.78□□□□□ -0.84
SCARNA1-201ENST00000517138 BSNDQ8WZ55 320 aa9.78□□□□□ -0.84
SCARNA1-201ENST00000517138 SOX1O00570 391 aaPredicted RBP9.77□□□□□ -0.85
SCARNA1-201ENST00000517138 CCNJLQ8IV13 435 aa9.77□□□□□ -0.85
SCARNA1-201ENST00000517138 EPS8L3Q8TE67 593 aaKnown RBP9.77□□□□□ -0.85
SCARNA1-201ENST00000517138 FOXD4L4Q8WXT5 416 aaPredicted RBP9.77□□□□□ -0.85
SCARNA1-201ENST00000517138 LIN7BQ9HAP6 207 aa9.77□□□□□ -0.85
SCARNA1-201ENST00000517138 CD68P34810 354 aaPredicted RBP9.76□□□□□ -0.85
SCARNA1-201ENST00000517138 MAP4K3Q8IVH8 894 aa9.76□□□□□ -0.85
SCARNA1-201ENST00000517138 UBASH3BQ8TF42 649 aa9.76□□□□□ -0.85
SCARNA1-201ENST00000517138 MEGF10Q96KG7 1140 aa9.76□□□□□ -0.85
SCARNA1-201ENST00000517138 SETDB2Q96T68 719 aa9.76□□□□□ -0.85
SCARNA1-201ENST00000517138 SSBP4Q9BWG4 385 aaPredicted RBP9.76□□□□□ -0.85
SCARNA1-201ENST00000517138 SRA1Q9HD15 236 aaKnown RBP9.76□□□□□ -0.85
SCARNA1-201ENST00000517138 F8W735 103 aaPredicted RBP9.75□□□□□ -0.85
SCARNA1-201ENST00000517138 TREHO43280 583 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms