RNA–Protein interactions for RNA: ENST00000516847.1

RN7SKP88-201, Transcript of RNA, 7SK small nuclear pseudogene 88, humanhuman

BASIC

Gene RN7SKP88, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP88-201ENST00000516847 TCF12Q99081 682 aa1.91□□□□□ -2.1
RN7SKP88-201ENST00000516847 SRRTQ9BXP5 876 aaKnown RBP1.91□□□□□ -2.1
RN7SKP88-201ENST00000516847 OXCT2Q9BYC2 517 aaPredicted RBP1.91□□□□□ -2.1
RN7SKP88-201ENST00000516847 TRIM55Q9BYV6 548 aa1.91□□□□□ -2.1
RN7SKP88-201ENST00000516847 BHLHE41Q9C0J9 482 aaPredicted RBP1.91□□□□□ -2.1
RN7SKP88-201ENST00000516847 CCDC113Q9H0I3 377 aa1.91□□□□□ -2.1
RN7SKP88-201ENST00000516847 LIN7BQ9HAP6 207 aa1.91□□□□□ -2.1
RN7SKP88-201ENST00000516847 GINM1Q9NU53 330 aa1.91□□□□□ -2.1
RN7SKP88-201ENST00000516847 SNTG2Q9NY99 539 aa1.91□□□□□ -2.1
RN7SKP88-201ENST00000516847 KCNH4Q9UQ05 1017 aa1.91□□□□□ -2.1
RN7SKP88-201ENST00000516847 EFR3BQ9Y2G0 817 aa1.91□□□□□ -2.1
RN7SKP88-201ENST00000516847 USP20Q9Y2K6 914 aa1.91□□□□□ -2.1
RN7SKP88-201ENST00000516847 NOP58Q9Y2X3 529 aaKnown RBP1.91□□□□□ -2.1
RN7SKP88-201ENST00000516847 MRPL42Q9Y6G3 142 aaKnown RBP1.91□□□□□ -2.1
RN7SKP88-201ENST00000516847 GJA3Q9Y6H8 435 aa1.91□□□□□ -2.1
RN7SKP88-201ENST00000516847 hCG_2014768A0A024R1R8 64 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 A0A0G2JS52 829 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 TTLL8A6PVC2 850 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 ENC1O14682 589 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 CAPN5O15484 640 aaPredicted RBP1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 MMP20O60882 483 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 PSAPP07602 524 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 IMPDH2P12268 514 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 BMP2P12643 396 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 ETFBP38117 255 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 NRLP54845 237 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 IGBP1P78318 339 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 PLAURQ03405 335 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 APOBRQ0VD83 1088 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 HYAL2Q12891 473 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 CAMK2GQ13555 558 aaPredicted RBP1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 RASGRF1Q13972 1273 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 MPP2Q14168 576 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 ARSHQ5FYA8 562 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 TAF7LQ5H9L4 462 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 SNAP47Q5SQN1 464 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 TTBK2Q6IQ55 1244 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 MRPL14Q6P1L8 145 aaKnown RBP1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 PRICKLE2Q7Z3G6 844 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 REXO1Q8N1G1 1221 aaKnown RBP1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 SYNPOQ8N3V7 929 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 CEP120Q8N960 986 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 JMYQ8N9B5 988 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 TMEM102Q8N9M5 508 aaPredicted RBP1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 HPS1Q92902 700 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 NKD1Q969G9 470 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 ZNF669Q96BR6 464 aaPredicted RBP1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 GPATCH3Q96I76 525 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 GMCL1Q96IK5 515 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 RNPC3Q96LT9 517 aaKnown RBP1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 CNTNAP3BQ96NU0 1288 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 SRPK1Q96SB4 655 aaKnown RBP1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 ZKSCAN3Q9BRR0 538 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 CNTNAP3Q9BZ76 1288 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 GSX2Q9BZM3 304 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 LATS2Q9NRM7 1088 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 DZANK1Q9NVP4 752 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 TLR7Q9NYK1 1049 aaKnown RBP1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 R3HCC1Q9Y3T6 440 aaKnown RBP1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 SAMM50Q9Y512 469 aa1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 SOS2Q07890 1332 aaPredicted RBP1.9□□□□□ -2.11
RN7SKP88-201ENST00000516847 FAM221AA4D161 298 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 MINDY4BA8MYZ0 360 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 NFKBIEO00221 500 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 ATXN7O15265 892 aaPredicted RBP1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 EIF4EBP3O60516 100 aaPredicted RBP1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 DNAJC6O75061 913 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 RAB11FIP3O75154 756 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 CDC45O75419 566 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 SASH3O75995 380 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 AVPP01185 164 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 PF4P02776 101 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 CYP2E1P05181 493 aaPredicted RBP1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 CELA3AP09093 270 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 RARAP10276 462 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 TFE3P19532 575 aaPredicted RBP1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 CRKP46108 304 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 GRIA4P48058 902 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 GIPRP48546 466 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 ZNF165P49910 485 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 CASP7P55210 303 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 EIF6P56537 245 aaKnown RBP1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 ANAPC15P60006 121 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 TNP2Q05952 138 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 PPP2R3AQ06190 1150 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 UBAP2LQ14157 1087 aaKnown RBP1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 SCARF1Q14162 830 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 PCSK7Q16549 785 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 DDR2Q16832 855 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 CWF19L2Q2TBE0 894 aaKnown RBP1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 FAM182BQ5T319 152 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 CCDC181Q5TID7 509 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 TPTE2Q6XPS3 522 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 TRIM67Q6ZTA4 783 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 KIAA0907Q7Z7F0 614 aaPredicted RBP1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 NCAPG2Q86XI2 1143 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 HOMER1Q86YM7 354 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 C19orf47Q8N9M1 422 aaKnown RBP1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 GOLM1Q8NBJ4 401 aa1.89□□□□□ -2.11
RN7SKP88-201ENST00000516847 RBBP8NLQ8NC74 664 aaPredicted RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms