RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 RIMBP2O15034 1052 aa7.53□□□□□ -1.2
SCARNA18.1-201ENST00000516330 ZBTB22O15209 634 aa7.53□□□□□ -1.2
SCARNA18.1-201ENST00000516330 IPO8O15397 1037 aaKnown RBP7.53□□□□□ -1.2
SCARNA18.1-201ENST00000516330 RARSP54136 660 aaKnown RBP7.53□□□□□ -1.2
SCARNA18.1-201ENST00000516330 UBE4AQ14139 1066 aa7.53□□□□□ -1.2
SCARNA18.1-201ENST00000516330 MAP1SQ66K74 1059 aaPredicted RBP7.53□□□□□ -1.2
SCARNA18.1-201ENST00000516330 LDHAL6AQ6ZMR3 332 aa7.53□□□□□ -1.2
SCARNA18.1-201ENST00000516330 CDC37L1Q7L3B6 337 aa7.53□□□□□ -1.2
SCARNA18.1-201ENST00000516330 OGFOD1Q8N543 542 aa7.53□□□□□ -1.2
SCARNA18.1-201ENST00000516330 JARID2Q92833 1246 aaPredicted RBP7.53□□□□□ -1.2
SCARNA18.1-201ENST00000516330 CDCA7LQ96GN5 454 aa7.53□□□□□ -1.2
SCARNA18.1-201ENST00000516330 SUCLG2Q96I99 432 aa7.53□□□□□ -1.2
SCARNA18.1-201ENST00000516330 BICC1Q9H694 974 aaKnown RBP7.53□□□□□ -1.2
SCARNA18.1-201ENST00000516330 CNNM1Q9NRU3 951 aa7.53□□□□□ -1.2
SCARNA18.1-201ENST00000516330 NBPF7P0C2Y1 421 aaPredicted RBP7.52□□□□□ -1.21
SCARNA18.1-201ENST00000516330 USP17L8P0C7I0 530 aa7.52□□□□□ -1.21
SCARNA18.1-201ENST00000516330 UBTFL1P0CB47 393 aaPredicted RBP7.52□□□□□ -1.21
SCARNA18.1-201ENST00000516330 IL1R1P14778 569 aa7.52□□□□□ -1.21
SCARNA18.1-201ENST00000516330 ECE1P42892 770 aa7.52□□□□□ -1.21
SCARNA18.1-201ENST00000516330 HNRNPUQ00839 825 aaKnown RBP eCLIP7.52□□□□□ -1.21
SCARNA18.1-201ENST00000516330 DACT2Q5SW24 774 aa7.52□□□□□ -1.21
SCARNA18.1-201ENST00000516330 TRPM4Q8TD43 1214 aa7.52□□□□□ -1.21
SCARNA18.1-201ENST00000516330 GMLQ99445 158 aa7.52□□□□□ -1.21
SCARNA18.1-201ENST00000516330 HDAC9Q9UKV0 1011 aa7.52□□□□□ -1.21
SCARNA18.1-201ENST00000516330 ZBTB12Q9Y330 459 aaPredicted RBP7.52□□□□□ -1.21
SCARNA18.1-201ENST00000516330 GNAI3P08754 354 aa7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 FKBP1BP68106 108 aa7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 MTX1Q13505 466 aa7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 DOK7Q18PE1 504 aa7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 EPHA10Q5JZY3 1008 aa7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 INTS3Q68E01 1043 aaKnown RBP7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 ATF7IPQ6VMQ6 1270 aa7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 SULF1Q8IWU6 871 aa7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 ANKRD44Q8N8A2 993 aa7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 DCPSQ96C86 337 aaKnown RBP7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 KAZALD1Q96I82 304 aa7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 GPR101Q96P66 508 aaPredicted RBP7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 USP44Q9H0E7 712 aa7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 CD209Q9NNX6 404 aa7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 MYOZ2Q9NPC6 264 aa7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 GGA3Q9NZ52 723 aa7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 TLL2Q9Y6L7 1015 aa7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 FAM205AQ6ZU69 1335 aa7.51□□□□□ -1.21
SCARNA18.1-201ENST00000516330 CIAO1O76071 339 aa7.5□□□□□ -1.21
SCARNA18.1-201ENST00000516330 HIRAP54198 1017 aaPredicted RBP7.5□□□□□ -1.21
SCARNA18.1-201ENST00000516330 PUM3Q15397 648 aaKnown RBP7.5□□□□□ -1.21
SCARNA18.1-201ENST00000516330 KRT26Q7Z3Y9 468 aa7.5□□□□□ -1.21
SCARNA18.1-201ENST00000516330 APOBEC3FQ8IUX4 373 aaKnown RBP7.5□□□□□ -1.21
SCARNA18.1-201ENST00000516330 MIER1Q8N108 512 aa7.5□□□□□ -1.21
SCARNA18.1-201ENST00000516330 VGLL2Q8N8G2 317 aa7.5□□□□□ -1.21
SCARNA18.1-201ENST00000516330 MTMR14Q8NCE2 650 aa7.5□□□□□ -1.21
SCARNA18.1-201ENST00000516330 ABT1Q9ULW3 272 aaKnown RBP7.5□□□□□ -1.21
SCARNA18.1-201ENST00000516330 NOB1Q9ULX3 412 aaKnown RBP7.5□□□□□ -1.21
SCARNA18.1-201ENST00000516330 RIPOR2Q9Y4F9 1068 aa7.5□□□□□ -1.21
SCARNA18.1-201ENST00000516330 PPP2R3BQ9Y5P8 575 aa7.5□□□□□ -1.21
SCARNA18.1-201ENST00000516330 MAST3O60307 1309 aa7.5□□□□□ -1.21
SCARNA18.1-201ENST00000516330 MAST2Q6P0Q8 1798 aa7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 PDE8BO95263 885 aa7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 TRIM27P14373 513 aa7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 HTRA3P83110 453 aa7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 MAP2K1Q02750 393 aaPredicted RBP7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 DEFB115Q30KQ5 88 aa7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 TBC1D10BQ4KMP7 808 aaPredicted RBP7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 CAVIN4Q5BKX8 364 aa7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 METTL24Q5JXM2 366 aa7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 TTLL5Q6EMB2 1281 aa7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 SAMD7Q7Z3H4 446 aa7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 SAPCD2Q86UD0 394 aa7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 TXNRD3Q86VQ6 643 aa7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 TBC1D22AQ8WUA7 517 aa7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 SUGT1Q9Y2Z0 365 aa7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 PDS5AQ29RF7 1337 aaKnown RBP7.49□□□□□ -1.21
SCARNA18.1-201ENST00000516330 RPAP1Q9BWH6 1393 aaPredicted RBP7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 EYA2O00167 538 aa7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 WNT10BO00744 389 aa7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 CA12O43570 354 aa7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 MYO1BO43795 1136 aa7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 SASH1O94885 1247 aa7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 CELF2O95319 508 aaKnown RBP7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 IFIT1P09914 478 aaKnown RBP7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 HSPA1AP0DMV8 641 aaKnown RBP7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 HSPA1BP0DMV9 641 aaKnown RBP7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 KLRK1P26718 216 aa7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 NF2P35240 595 aa7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 MAP2K2P36507 400 aa7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 PTPN12Q05209 780 aaKnown RBP7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 NOGQ13253 232 aa7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 TNFAIP1Q13829 316 aa7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 ZKSCAN2Q63HK3 967 aa7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 TDRD7Q8NHU6 1098 aaKnown RBP7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 LPIN2Q92539 896 aa7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 GLIS2Q9BZE0 524 aaPredicted RBP7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 COPRSQ9NQ92 184 aa7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 MKRN1Q9UHC7 482 aaKnown RBP7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 PCNTO95613 3336 aa7.48□□□□□ -1.21
SCARNA18.1-201ENST00000516330 SHTN1A0MZ66 631 aa7.47□□□□□ -1.21
SCARNA18.1-201ENST00000516330 UNCXA6NJT0 531 aa7.47□□□□□ -1.21
SCARNA18.1-201ENST00000516330 TRAF5O00463 557 aa7.47□□□□□ -1.21
SCARNA18.1-201ENST00000516330 SEMA3EO15041 775 aa7.47□□□□□ -1.21
SCARNA18.1-201ENST00000516330 TAF5LO75529 589 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms