RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 USP17L1Q7RTZ2 530 aa24.24■■□□□ 1.47
LMNA-225ENST00000515824 FTSJ3Q8IY81 847 aaKnown RBP24.24■■□□□ 1.47
LMNA-225ENST00000515824 TMEM57Q8N5G2 664 aa24.23■■□□□ 1.47
LMNA-225ENST00000515824 KLRK1P26718 216 aa24.22■■□□□ 1.47
LMNA-225ENST00000515824 UBE4AQ14139 1066 aa24.22■■□□□ 1.47
LMNA-225ENST00000515824 LRRC24Q50LG9 513 aa24.22■■□□□ 1.47
LMNA-225ENST00000515824 RSBN1LQ6PCB5 846 aaPredicted RBP24.22■■□□□ 1.47
LMNA-225ENST00000515824 MICALL2Q8IY33 904 aa24.22■■□□□ 1.47
LMNA-225ENST00000515824 DZIP1LQ8IYY4 767 aaKnown RBP24.22■■□□□ 1.47
LMNA-225ENST00000515824 KLHDC4Q8TBB5 520 aa24.22■■□□□ 1.47
LMNA-225ENST00000515824 RFX5P48382 616 aaPredicted RBP24.21■■□□□ 1.47
LMNA-225ENST00000515824 METTL24Q5JXM2 366 aa24.21■■□□□ 1.47
LMNA-225ENST00000515824 AGBL3Q8NEM8 1001 aa24.21■■□□□ 1.47
LMNA-225ENST00000515824 PTPN12Q05209 780 aaKnown RBP24.2■■□□□ 1.46
LMNA-225ENST00000515824 STRIP1Q5VSL9 837 aa24.2■■□□□ 1.46
LMNA-225ENST00000515824 ZNF804AQ7Z570 1209 aa24.2■■□□□ 1.46
LMNA-225ENST00000515824 CNTROBQ8N137 903 aa24.2■■□□□ 1.46
LMNA-225ENST00000515824 CD209Q9NNX6 404 aa24.2■■□□□ 1.46
LMNA-225ENST00000515824 EYA2O00167 538 aa24.19■■□□□ 1.46
LMNA-225ENST00000515824 GNAI2P04899 355 aa24.19■■□□□ 1.46
LMNA-225ENST00000515824 MAP1SQ66K74 1059 aaPredicted RBP24.19■■□□□ 1.46
LMNA-225ENST00000515824 FBXW7Q969H0 707 aa24.19■■□□□ 1.46
LMNA-225ENST00000515824 IRS2Q9Y4H2 1338 aa24.18■■□□□ 1.46
LMNA-225ENST00000515824 SHTN1A0MZ66 631 aa24.18■■□□□ 1.46
LMNA-225ENST00000515824 PDE8BO95263 885 aa24.18■■□□□ 1.46
LMNA-225ENST00000515824 TTLL5Q6EMB2 1281 aa24.18■■□□□ 1.46
LMNA-225ENST00000515824 FBXO3Q9UK99 471 aa24.18■■□□□ 1.46
LMNA-225ENST00000515824 RCAN3Q9UKA8 241 aa24.18■■□□□ 1.46
LMNA-225ENST00000515824 SCN9AQ15858 1988 aa24.17■■□□□ 1.46
LMNA-225ENST00000515824 ITGBL1O95965 494 aaPredicted RBP24.17■■□□□ 1.46
LMNA-225ENST00000515824 MS4A1P11836 297 aa24.17■■□□□ 1.46
LMNA-225ENST00000515824 SAMD7Q7Z3H4 446 aa24.17■■□□□ 1.46
LMNA-225ENST00000515824 ZC3H15Q8WU90 426 aaKnown RBP24.17■■□□□ 1.46
LMNA-225ENST00000515824 GTF2IP78347 998 aa24.16■■□□□ 1.46
LMNA-225ENST00000515824 DACT2Q5SW24 774 aa24.16■■□□□ 1.46
LMNA-225ENST00000515824 ITPRIPQ8IWB1 547 aa24.16■■□□□ 1.46
LMNA-225ENST00000515824 TRPM4Q8TD43 1214 aa24.16■■□□□ 1.46
LMNA-225ENST00000515824 MYO3BQ8WXR4 1341 aa24.15■■□□□ 1.46
LMNA-225ENST00000515824 SRGAP3O43295 1099 aa24.15■■□□□ 1.46
LMNA-225ENST00000515824 USP17L8P0C7I0 530 aa24.15■■□□□ 1.46
LMNA-225ENST00000515824 IL1R1P14778 569 aa24.15■■□□□ 1.46
LMNA-225ENST00000515824 HIRAP54198 1017 aaPredicted RBP24.15■■□□□ 1.46
LMNA-225ENST00000515824 TBC1D10BQ4KMP7 808 aaPredicted RBP24.15■■□□□ 1.46
LMNA-225ENST00000515824 RBM26Q5T8P6 1007 aaKnown RBP24.15■■□□□ 1.46
LMNA-225ENST00000515824 GMLQ99445 158 aa24.15■■□□□ 1.46
LMNA-225ENST00000515824 SIL1Q9H173 461 aa24.15■■□□□ 1.46
LMNA-225ENST00000515824 ZNF609O15014 1411 aa24.15■■□□□ 1.46
LMNA-225ENST00000515824 PASKQ96RG2 1323 aa24.14■■□□□ 1.46
LMNA-225ENST00000515824 ADAMTSL1Q8N6G6 1762 aa24.14■■□□□ 1.46
LMNA-225ENST00000515824 CIAO1O76071 339 aa24.14■■□□□ 1.45
LMNA-225ENST00000515824 RLBP1P12271 317 aa24.14■■□□□ 1.45
LMNA-225ENST00000515824 HIBADHP31937 336 aaKnown RBP24.14■■□□□ 1.45
LMNA-225ENST00000515824 MTX1Q13505 466 aa24.14■■□□□ 1.45
LMNA-225ENST00000515824 VGLL2Q8N8G2 317 aa24.14■■□□□ 1.45
LMNA-225ENST00000515824 COPRSQ9NQ92 184 aa24.14■■□□□ 1.45
LMNA-225ENST00000515824 PGAP2Q9UHJ9 254 aa24.14■■□□□ 1.45
LMNA-225ENST00000515824 ZNF280AP59817 542 aaPredicted RBP24.13■■□□□ 1.45
LMNA-225ENST00000515824 OGFOD1Q8N543 542 aa24.13■■□□□ 1.45
LMNA-225ENST00000515824 FAM84BQ96KN1 310 aaPredicted RBP24.13■■□□□ 1.45
LMNA-225ENST00000515824 IL15P40933 162 aaPredicted RBP24.12■■□□□ 1.45
LMNA-225ENST00000515824 GYG1P46976 350 aa24.12■■□□□ 1.45
LMNA-225ENST00000515824 HTRA3P83110 453 aa24.12■■□□□ 1.45
LMNA-225ENST00000515824 PUM3Q15397 648 aaKnown RBP24.12■■□□□ 1.45
LMNA-225ENST00000515824 KIF4BQ2VIQ3 1234 aa24.12■■□□□ 1.45
LMNA-225ENST00000515824 CAVIN4Q5BKX8 364 aa24.12■■□□□ 1.45
LMNA-225ENST00000515824 ATG9AQ7Z3C6 839 aa24.12■■□□□ 1.45
LMNA-225ENST00000515824 VPS37DQ86XT2 251 aa24.12■■□□□ 1.45
LMNA-225ENST00000515824 MXD3Q9BW11 206 aa24.12■■□□□ 1.45
LMNA-225ENST00000515824 CEP126Q9P2H0 1117 aa24.12■■□□□ 1.45
LMNA-225ENST00000515824 PA2G4Q9UQ80 394 aaKnown RBP24.12■■□□□ 1.45
LMNA-225ENST00000515824 ZBTB7BO15156 539 aaPredicted RBP24.11■■□□□ 1.45
LMNA-225ENST00000515824 SASH1O94885 1247 aa24.11■■□□□ 1.45
LMNA-225ENST00000515824 IFIT1P09914 478 aaKnown RBP24.11■■□□□ 1.45
LMNA-225ENST00000515824 MMP14P50281 582 aa24.11■■□□□ 1.45
LMNA-225ENST00000515824 CEP350Q5VT06 3117 aa24.11■■□□□ 1.45
LMNA-225ENST00000515824 A0A1B0GUL6 1792 aa24.11■■□□□ 1.45
LMNA-225ENST00000515824 TDRD7Q8NHU6 1098 aaKnown RBP24.1■■□□□ 1.45
LMNA-225ENST00000515824 PANK1Q8TE04 598 aa24.1■■□□□ 1.45
LMNA-225ENST00000515824 MYOZ2Q9NPC6 264 aa24.1■■□□□ 1.45
LMNA-225ENST00000515824 CREBZFQ9NS37 354 aa24.1■■□□□ 1.45
LMNA-225ENST00000515824 EGFRP00533 1210 aa24.09■■□□□ 1.45
LMNA-225ENST00000515824 SLC5A1P13866 664 aa24.09■■□□□ 1.45
LMNA-225ENST00000515824 CDC37L1Q7L3B6 337 aa24.09■■□□□ 1.45
LMNA-225ENST00000515824 FBXO33Q7Z6M2 555 aa24.09■■□□□ 1.45
LMNA-225ENST00000515824 LPIN2Q92539 896 aa24.09■■□□□ 1.45
LMNA-225ENST00000515824 HDAC9Q9UKV0 1011 aa24.09■■□□□ 1.45
LMNA-225ENST00000515824 PSME4Q14997 1843 aa24.08■■□□□ 1.45
LMNA-225ENST00000515824 TMEM88BA6NKF7 163 aa24.08■■□□□ 1.45
LMNA-225ENST00000515824 FGFR2P21802 821 aa24.08■■□□□ 1.45
LMNA-225ENST00000515824 FKBP1AP62942 108 aaKnown RBP24.08■■□□□ 1.45
LMNA-225ENST00000515824 DNAJC5GQ8N7S2 189 aa24.08■■□□□ 1.45
LMNA-225ENST00000515824 DCPSQ96C86 337 aaKnown RBP24.08■■□□□ 1.45
LMNA-225ENST00000515824 KIAA0825Q8IV33 1275 aa24.07■■□□□ 1.44
LMNA-225ENST00000515824 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.07■■□□□ 1.44
LMNA-225ENST00000515824 YTHDC1Q96MU7 727 aaKnown RBP24.07■■□□□ 1.44
LMNA-225ENST00000515824 PNMA6EA0A0J9YXQ4 647 aa24.06■■□□□ 1.44
LMNA-225ENST00000515824 FRAT2O75474 233 aaPredicted RBP24.06■■□□□ 1.44
LMNA-225ENST00000515824 SCARF1Q14162 830 aa24.06■■□□□ 1.44
LMNA-225ENST00000515824 GLIS2Q9BZE0 524 aaPredicted RBP24.06■■□□□ 1.44
LMNA-225ENST00000515824 FAM205AQ6ZU69 1335 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms