RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 GLTPD2A6NH11 291 aa14.72□□□□□ -0.05
SNF8-215ENST00000515572 ECE2O60344 883 aa14.72□□□□□ -0.05
SNF8-215ENST00000515572 IFIT1P09914 478 aaKnown RBP14.72□□□□□ -0.05
SNF8-215ENST00000515572 SLC5A1P13866 664 aa14.72□□□□□ -0.05
SNF8-215ENST00000515572 ATP2B3Q16720 1220 aa14.72□□□□□ -0.05
SNF8-215ENST00000515572 ZNF804AQ7Z570 1209 aa14.72□□□□□ -0.05
SNF8-215ENST00000515572 PODNQ7Z5L7 613 aa14.72□□□□□ -0.05
SNF8-215ENST00000515572 LPIN2Q92539 896 aa14.72□□□□□ -0.05
SNF8-215ENST00000515572 DBNDD1Q9H9R9 158 aa14.72□□□□□ -0.05
SNF8-215ENST00000515572 SCN9AQ15858 1988 aa14.71□□□□□ -0.05
SNF8-215ENST00000515572 MYH13Q9UKX3 1938 aa14.71□□□□□ -0.05
SNF8-215ENST00000515572 SNAP23O00161 211 aa14.71□□□□□ -0.05
SNF8-215ENST00000515572 FGFR2P21802 821 aa14.71□□□□□ -0.05
SNF8-215ENST00000515572 KLRK1P26718 216 aa14.71□□□□□ -0.05
SNF8-215ENST00000515572 TFCP2Q12800 502 aa14.71□□□□□ -0.05
SNF8-215ENST00000515572 TNIP1Q15025 636 aa14.71□□□□□ -0.05
SNF8-215ENST00000515572 DOK7Q18PE1 504 aa14.71□□□□□ -0.05
SNF8-215ENST00000515572 CAVIN4Q5BKX8 364 aa14.71□□□□□ -0.05
SNF8-215ENST00000515572 TXNRD3Q86VQ6 643 aa14.71□□□□□ -0.05
SNF8-215ENST00000515572 GPC2Q8N158 579 aa14.71□□□□□ -0.05
SNF8-215ENST00000515572 ZNF541Q9H0D2 1346 aa14.7□□□□□ -0.06
SNF8-215ENST00000515572 WDR90Q96KV7 1748 aa14.7□□□□□ -0.06
SNF8-215ENST00000515572 RAB11FIP3O75154 756 aa14.7□□□□□ -0.06
SNF8-215ENST00000515572 SASH1O94885 1247 aa14.7□□□□□ -0.06
SNF8-215ENST00000515572 EXOC6Q8TAG9 804 aa14.7□□□□□ -0.06
SNF8-215ENST00000515572 GPR108Q9NPR9 543 aa14.7□□□□□ -0.06
SNF8-215ENST00000515572 EXOC6BQ9Y2D4 811 aa14.7□□□□□ -0.06
SNF8-215ENST00000515572 PCDHB15Q9Y5E8 787 aa14.7□□□□□ -0.06
SNF8-215ENST00000515572 SCN4AP35499 1836 aa14.7□□□□□ -0.06
SNF8-215ENST00000515572 YDJCA8MPS7 323 aa14.69□□□□□ -0.06
SNF8-215ENST00000515572 IL1R1P14778 569 aa14.69□□□□□ -0.06
SNF8-215ENST00000515572 HIBADHP31937 336 aaKnown RBP14.69□□□□□ -0.06
SNF8-215ENST00000515572 CXCL9Q07325 125 aa14.69□□□□□ -0.06
SNF8-215ENST00000515572 CIAPIN1Q6FI81 312 aa14.69□□□□□ -0.06
SNF8-215ENST00000515572 VPS37DQ86XT2 251 aa14.69□□□□□ -0.06
SNF8-215ENST00000515572 CD209Q9NNX6 404 aa14.69□□□□□ -0.06
SNF8-215ENST00000515572 UTRNP46939 3433 aa14.69□□□□□ -0.06
SNF8-215ENST00000515572 ZNF646O15015 1829 aaPredicted RBP14.69□□□□□ -0.06
SNF8-215ENST00000515572 ZNF609O15014 1411 aa14.68□□□□□ -0.06
SNF8-215ENST00000515572 A0A1B0GUL7 405 aa14.68□□□□□ -0.06
SNF8-215ENST00000515572 RAD17O75943 681 aa14.68□□□□□ -0.06
SNF8-215ENST00000515572 GYG1P46976 350 aa14.68□□□□□ -0.06
SNF8-215ENST00000515572 FAM84BQ96KN1 310 aaPredicted RBP14.68□□□□□ -0.06
SNF8-215ENST00000515572 USP17L3A6NCW0 530 aa14.67□□□□□ -0.06
SNF8-215ENST00000515572 USP17L4A6NCW7 530 aa14.67□□□□□ -0.06
SNF8-215ENST00000515572 DDNO94850 711 aaPredicted RBP14.67□□□□□ -0.06
SNF8-215ENST00000515572 IRX6P78412 446 aaPredicted RBP14.67□□□□□ -0.06
SNF8-215ENST00000515572 HDAC1Q13547 482 aaPredicted RBP14.67□□□□□ -0.06
SNF8-215ENST00000515572 USP17L1Q7RTZ2 530 aa14.67□□□□□ -0.06
SNF8-215ENST00000515572 FBXO33Q7Z6M2 555 aa14.67□□□□□ -0.06
SNF8-215ENST00000515572 KIF1BPQ96EK5 621 aa14.67□□□□□ -0.06
SNF8-215ENST00000515572 L3MBTL3Q96JM7 780 aaPredicted RBP14.67□□□□□ -0.06
SNF8-215ENST00000515572 DCTPP1Q9H773 170 aa14.67□□□□□ -0.06
SNF8-215ENST00000515572 GJA3Q9Y6H8 435 aa14.67□□□□□ -0.06
SNF8-215ENST00000515572 ZBTB22O15209 634 aa14.66□□□□□ -0.06
SNF8-215ENST00000515572 VIL1P09327 827 aaKnown RBP14.66□□□□□ -0.06
SNF8-215ENST00000515572 TIMM10P62072 90 aa14.66□□□□□ -0.06
SNF8-215ENST00000515572 TNNI3KQ59H18 835 aa14.66□□□□□ -0.06
SNF8-215ENST00000515572 STRIP1Q5VSL9 837 aa14.66□□□□□ -0.06
SNF8-215ENST00000515572 TDRD7Q8NHU6 1098 aaKnown RBP14.66□□□□□ -0.06
SNF8-215ENST00000515572 RHPN1Q8TCX5 695 aa14.66□□□□□ -0.06
SNF8-215ENST00000515572 GPBP1L1Q9HC44 474 aaPredicted RBP14.66□□□□□ -0.06
SNF8-215ENST00000515572 GNL3LQ9NVN8 582 aaKnown RBP14.66□□□□□ -0.06
SNF8-215ENST00000515572 FPGT-TNNI3KV9GXZ4 949 aa14.66□□□□□ -0.06
SNF8-215ENST00000515572 IQCA1LA6NCM1 817 aa14.65□□□□□ -0.06
SNF8-215ENST00000515572 PSMD14O00487 310 aa14.65□□□□□ -0.06
SNF8-215ENST00000515572 SEMA3EO15041 775 aa14.65□□□□□ -0.06
SNF8-215ENST00000515572 RPS12P25398 132 aaKnown RBP14.65□□□□□ -0.06
SNF8-215ENST00000515572 CLASRPQ8N2M8 674 aaKnown RBP14.65□□□□□ -0.06
SNF8-215ENST00000515572 ZNF784Q8NCA9 323 aaPredicted RBP14.65□□□□□ -0.06
SNF8-215ENST00000515572 ZNF526Q8TF50 670 aaPredicted RBP14.65□□□□□ -0.06
SNF8-215ENST00000515572 XAGE2Q96GT9 111 aa14.65□□□□□ -0.06
SNF8-215ENST00000515572 NEUROD6Q96NK8 337 aa14.65□□□□□ -0.06
SNF8-215ENST00000515572 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.65□□□□□ -0.06
SNF8-215ENST00000515572 MYO3BQ8WXR4 1341 aa14.65□□□□□ -0.06
SNF8-215ENST00000515572 APBB1O00213 710 aa14.64□□□□□ -0.07
SNF8-215ENST00000515572 FRAT2O75474 233 aaPredicted RBP14.64□□□□□ -0.07
SNF8-215ENST00000515572 LMOD1P29536 600 aaPredicted RBP14.64□□□□□ -0.07
SNF8-215ENST00000515572 BCAMP50895 628 aa14.64□□□□□ -0.07
SNF8-215ENST00000515572 FKBP1AP62942 108 aaKnown RBP14.64□□□□□ -0.07
SNF8-215ENST00000515572 GTF2IP78347 998 aa14.64□□□□□ -0.07
SNF8-215ENST00000515572 DACT2Q5SW24 774 aa14.64□□□□□ -0.07
SNF8-215ENST00000515572 GORABQ5T7V8 394 aa14.64□□□□□ -0.07
SNF8-215ENST00000515572 TTLL5Q6EMB2 1281 aa14.64□□□□□ -0.07
SNF8-215ENST00000515572 LRRCC1Q9C099 1032 aa14.64□□□□□ -0.07
SNF8-215ENST00000515572 RWDD1Q9H446 243 aaPredicted RBP14.64□□□□□ -0.07
SNF8-215ENST00000515572 KCNQ5Q9NR82 932 aa14.64□□□□□ -0.07
SNF8-215ENST00000515572 FAM205AQ6ZU69 1335 aa14.64□□□□□ -0.07
SNF8-215ENST00000515572 VEGFAP15692 232 aaPredicted RBP14.63□□□□□ -0.07
SNF8-215ENST00000515572 ADORA1P30542 326 aa14.63□□□□□ -0.07
SNF8-215ENST00000515572 CCDC102BQ68D86 513 aa14.63□□□□□ -0.07
SNF8-215ENST00000515572 RSBN1LQ6PCB5 846 aaPredicted RBP14.63□□□□□ -0.07
SNF8-215ENST00000515572 AGBL3Q8NEM8 1001 aa14.63□□□□□ -0.07
SNF8-215ENST00000515572 DPF2Q92785 391 aa14.63□□□□□ -0.07
SNF8-215ENST00000515572 FBXW7Q969H0 707 aa14.63□□□□□ -0.07
SNF8-215ENST00000515572 GCC1Q96CN9 775 aa14.63□□□□□ -0.07
SNF8-215ENST00000515572 NEFLP07196 543 aa14.62□□□□□ -0.07
SNF8-215ENST00000515572 PHKA1P46020 1223 aa14.62□□□□□ -0.07
SNF8-215ENST00000515572 GMPSP49915 693 aaPredicted RBP14.62□□□□□ -0.07
SNF8-215ENST00000515572 MMP14P50281 582 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms