RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 PODNQ7Z5L7 613 aa17.36■□□□□ 0.37
USP46-209ENST00000514536 FBXO3Q9UK99 471 aa17.36■□□□□ 0.37
USP46-209ENST00000514536 PSMD14O00487 310 aa17.36■□□□□ 0.37
USP46-209ENST00000514536 CIAO1O76071 339 aa17.36■□□□□ 0.37
USP46-209ENST00000514536 C15orf52Q6ZUT6 534 aaKnown RBP17.36■□□□□ 0.37
USP46-209ENST00000514536 C16orf71Q8IYS4 520 aaPredicted RBP17.36■□□□□ 0.37
USP46-209ENST00000514536 VGLL2Q8N8G2 317 aa17.36■□□□□ 0.37
USP46-209ENST00000514536 COA1Q9GZY4 146 aa17.36■□□□□ 0.37
USP46-209ENST00000514536 RRP1P56182 461 aaKnown RBP17.35■□□□□ 0.37
USP46-209ENST00000514536 ZBTB40Q9NUA8 1239 aa17.35■□□□□ 0.37
USP46-209ENST00000514536 HACL1Q9UJ83 578 aa17.35■□□□□ 0.37
USP46-209ENST00000514536 IRS2Q9Y4H2 1338 aa17.35■□□□□ 0.37
USP46-209ENST00000514536 IQCA1LA6NCM1 817 aa17.34■□□□□ 0.37
USP46-209ENST00000514536 GMPSP49915 693 aaPredicted RBP17.34■□□□□ 0.37
USP46-209ENST00000514536 POLA2Q14181 598 aa17.34■□□□□ 0.37
USP46-209ENST00000514536 CHMP4BQ9H444 224 aaKnown RBP17.34■□□□□ 0.37
USP46-209ENST00000514536 CEP126Q9P2H0 1117 aa17.34■□□□□ 0.37
USP46-209ENST00000514536 ZBTB12Q9Y330 459 aaPredicted RBP17.34■□□□□ 0.37
USP46-209ENST00000514536 LMOD1P29536 600 aaPredicted RBP17.33■□□□□ 0.37
USP46-209ENST00000514536 IL15P40933 162 aaPredicted RBP17.33■□□□□ 0.37
USP46-209ENST00000514536 EPS15P42566 896 aa17.33■□□□□ 0.37
USP46-209ENST00000514536 SCNN1DP51172 638 aa17.33■□□□□ 0.37
USP46-209ENST00000514536 TAF1DQ9H5J8 278 aaPredicted RBP17.33■□□□□ 0.37
USP46-209ENST00000514536 CD209Q9NNX6 404 aa17.33■□□□□ 0.37
USP46-209ENST00000514536 USP17L3A6NCW0 530 aa17.32■□□□□ 0.36
USP46-209ENST00000514536 USP17L4A6NCW7 530 aa17.32■□□□□ 0.36
USP46-209ENST00000514536 VIL1P09327 827 aaKnown RBP17.32■□□□□ 0.36
USP46-209ENST00000514536 GYG1P46976 350 aa17.32■□□□□ 0.36
USP46-209ENST00000514536 CEP85Q6P2H3 762 aa17.32■□□□□ 0.36
USP46-209ENST00000514536 USP17L1Q7RTZ2 530 aa17.32■□□□□ 0.36
USP46-209ENST00000514536 ZNF804AQ7Z570 1209 aa17.32■□□□□ 0.36
USP46-209ENST00000514536 RBM46Q8TBY0 533 aaKnown RBP17.32■□□□□ 0.36
USP46-209ENST00000514536 SSH3Q8TE77 659 aa17.32■□□□□ 0.36
USP46-209ENST00000514536 FBXW7Q969H0 707 aa17.32■□□□□ 0.36
USP46-209ENST00000514536 WDR90Q96KV7 1748 aa17.32■□□□□ 0.36
USP46-209ENST00000514536 FGFR2P21802 821 aa17.32■□□□□ 0.36
USP46-209ENST00000514536 EPHX2P34913 555 aa17.32■□□□□ 0.36
USP46-209ENST00000514536 G3BP1Q13283 466 aaKnown RBP eCLIP17.32■□□□□ 0.36
USP46-209ENST00000514536 PUM3Q15397 648 aaKnown RBP17.32■□□□□ 0.36
USP46-209ENST00000514536 FAM84BQ96KN1 310 aaPredicted RBP17.32■□□□□ 0.36
USP46-209ENST00000514536 GPRC5DQ9NZD1 345 aa17.32■□□□□ 0.36
USP46-209ENST00000514536 HIBADHP31937 336 aaKnown RBP17.31■□□□□ 0.36
USP46-209ENST00000514536 APLP1P51693 650 aa17.31■□□□□ 0.36
USP46-209ENST00000514536 CNOT7Q9UIV1 285 aaKnown RBP17.31■□□□□ 0.36
USP46-209ENST00000514536 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
USP46-209ENST00000514536 IFIT1P09914 478 aaKnown RBP17.3■□□□□ 0.36
USP46-209ENST00000514536 IL1R1P14778 569 aa17.3■□□□□ 0.36
USP46-209ENST00000514536 GTF2IP78347 998 aa17.3■□□□□ 0.36
USP46-209ENST00000514536 TFCP2Q12800 502 aa17.3■□□□□ 0.36
USP46-209ENST00000514536 EAPPQ56P03 285 aaPredicted RBP17.3■□□□□ 0.36
USP46-209ENST00000514536 TTLL5Q6EMB2 1281 aa17.3■□□□□ 0.36
USP46-209ENST00000514536 DNAJC5GQ8N7S2 189 aa17.3■□□□□ 0.36
USP46-209ENST00000514536 SHTN1A0MZ66 631 aa17.29■□□□□ 0.36
USP46-209ENST00000514536 POTEIP0CG38 1075 aa17.29■□□□□ 0.36
USP46-209ENST00000514536 POTEJP0CG39 1038 aa17.29■□□□□ 0.36
USP46-209ENST00000514536 SLC5A1P13866 664 aa17.29■□□□□ 0.36
USP46-209ENST00000514536 ATP2B3Q16720 1220 aa17.29■□□□□ 0.36
USP46-209ENST00000514536 CAVIN4Q5BKX8 364 aa17.29■□□□□ 0.36
USP46-209ENST00000514536 STRIP1Q5VSL9 837 aa17.29■□□□□ 0.36
USP46-209ENST00000514536 RSBN1LQ6PCB5 846 aaPredicted RBP17.29■□□□□ 0.36
USP46-209ENST00000514536 FBXO33Q7Z6M2 555 aa17.29■□□□□ 0.36
USP46-209ENST00000514536 LPIN2Q92539 896 aa17.29■□□□□ 0.36
USP46-209ENST00000514536 DPF2Q92785 391 aa17.29■□□□□ 0.36
USP46-209ENST00000514536 MXD3Q9BW11 206 aa17.29■□□□□ 0.36
USP46-209ENST00000514536 H7C1D1 291 aa17.28■□□□□ 0.36
USP46-209ENST00000514536 RPS12P25398 132 aaKnown RBP17.28■□□□□ 0.36
USP46-209ENST00000514536 BCAMP50895 628 aa17.28■□□□□ 0.36
USP46-209ENST00000514536 DACT2Q5SW24 774 aa17.28■□□□□ 0.36
USP46-209ENST00000514536 PNMA8AQ86V59 439 aaPredicted RBP17.28■□□□□ 0.36
USP46-209ENST00000514536 VPS37DQ86XT2 251 aa17.28■□□□□ 0.36
USP46-209ENST00000514536 RPAP2Q8IXW5 612 aaPredicted RBP17.28■□□□□ 0.36
USP46-209ENST00000514536 MICALL2Q8IY33 904 aa17.28■□□□□ 0.36
USP46-209ENST00000514536 TIMM10P62072 90 aa17.28■□□□□ 0.36
USP46-209ENST00000514536 OS9Q13438 667 aaPredicted RBP17.28■□□□□ 0.36
USP46-209ENST00000514536 AGBL3Q8NEM8 1001 aa17.28■□□□□ 0.36
USP46-209ENST00000514536 TDRD7Q8NHU6 1098 aaKnown RBP17.28■□□□□ 0.36
USP46-209ENST00000514536 ADARB2Q9NS39 739 aaKnown RBP17.28■□□□□ 0.36
USP46-209ENST00000514536 CLEC11AQ9Y240 323 aa17.28■□□□□ 0.36
USP46-209ENST00000514536 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.28■□□□□ 0.36
USP46-209ENST00000514536 SASH1O94885 1247 aa17.27■□□□□ 0.35
USP46-209ENST00000514536 FSTL1Q12841 308 aa17.27■□□□□ 0.35
USP46-209ENST00000514536 SIRT2Q8IXJ6 389 aa17.27■□□□□ 0.35
USP46-209ENST00000514536 GMLQ99445 158 aa17.27■□□□□ 0.35
USP46-209ENST00000514536 IQSEC3Q9UPP2 1182 aaPredicted RBP17.27■□□□□ 0.35
USP46-209ENST00000514536 JAG2Q9Y219 1238 aa17.27■□□□□ 0.35
USP46-209ENST00000514536 NOP58Q9Y2X3 529 aaKnown RBP17.27■□□□□ 0.35
USP46-209ENST00000514536 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.35
USP46-209ENST00000514536 A0A1B0GUL6 1792 aa17.26■□□□□ 0.35
USP46-209ENST00000514536 SCN9AQ15858 1988 aa17.26■□□□□ 0.35
USP46-209ENST00000514536 SMC1BQ8NDV3 1235 aa17.26■□□□□ 0.35
USP46-209ENST00000514536 CRBNQ96SW2 442 aa17.26■□□□□ 0.35
USP46-209ENST00000514536 AKAP2Q9Y2D5 859 aa17.26■□□□□ 0.35
USP46-209ENST00000514536 FRAT2O75474 233 aaPredicted RBP17.25■□□□□ 0.35
USP46-209ENST00000514536 RBM26Q5T8P6 1007 aaKnown RBP17.25■□□□□ 0.35
USP46-209ENST00000514536 USP50Q70EL3 339 aaPredicted RBP17.25■□□□□ 0.35
USP46-209ENST00000514536 SAMD7Q7Z3H4 446 aa17.25■□□□□ 0.35
USP46-209ENST00000514536 LDHDQ86WU2 507 aa17.25■□□□□ 0.35
USP46-209ENST00000514536 SCN4AP35499 1836 aa17.24■□□□□ 0.35
USP46-209ENST00000514536 A0A1B0GUL7 405 aa17.24■□□□□ 0.35
USP46-209ENST00000514536 HMMRO75330 724 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms